data_A1A5I # _chem_comp.id A1A5I _chem_comp.name "(3S)-3-(5-{[(3R,6S)-1-ethyl-6-methylpiperidin-3-yl]oxy}-1-oxo-1,3-dihydro-2H-isoindol-2-yl)piperidine-2,6-dione" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H27 N3 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-09-09 _chem_comp.pdbx_modified_date 2024-11-22 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 385.457 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1A5I _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9DJX _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1A5I C1 C1 C 0 1 Y N N N N N 19.531 16.824 -62.019 1.301 0.707 1.368 C1 A1A5I 1 A1A5I C2 C2 C 0 1 Y N N N N N 18.547 15.890 -62.315 1.743 -0.130 0.351 C2 A1A5I 2 A1A5I C3 C3 C 0 1 Y N N N N N 17.367 15.856 -61.590 0.824 -0.771 -0.473 C3 A1A5I 3 A1A5I C12 C4 C 0 1 N N S N N N 15.691 18.582 -57.673 -4.308 -0.737 -0.617 C12 A1A5I 4 A1A5I C13 C5 C 0 1 N N N N N N 14.337 19.134 -58.072 -5.030 -1.342 0.592 C13 A1A5I 5 A1A5I C14 C6 C 0 1 N N N N N N 13.566 19.564 -56.836 -6.521 -1.467 0.258 C14 A1A5I 6 A1A5I C15 C7 C 0 1 N N N N N N 13.446 18.458 -55.837 -7.051 -0.118 -0.149 C15 A1A5I 7 A1A5I C17 C8 C 0 1 N N N N N N 15.591 17.541 -56.574 -4.959 0.572 -0.977 C17 A1A5I 8 A1A5I C20 C9 C 0 1 N N R N N N 18.354 13.584 -63.035 3.957 0.280 1.110 C20 A1A5I 9 A1A5I C21 C10 C 0 1 N N N N N N 19.627 12.820 -62.755 4.207 1.740 0.723 C21 A1A5I 10 A1A5I C22 C11 C 0 1 N N N N N N 20.497 12.739 -64.004 4.892 1.786 -0.646 C22 A1A5I 11 A1A5I C23 C12 C 0 1 N N S N N N 19.720 12.252 -65.218 6.196 0.988 -0.586 C23 A1A5I 12 A1A5I C25 C13 C 0 1 N N N N N N 17.627 13.015 -64.233 5.288 -0.475 1.119 C25 A1A5I 13 A1A5I C26 C14 C 0 1 N N N N N N 17.766 12.697 -66.629 7.114 -1.231 -0.280 C26 A1A5I 14 A1A5I C27 C15 C 0 1 N N N N N N 16.323 13.121 -66.601 6.724 -2.709 -0.217 C27 A1A5I 15 A1A5I C28 C16 C 0 1 N N N N N N 20.573 12.192 -66.470 6.873 1.015 -1.958 C28 A1A5I 16 A1A5I C4 C17 C 0 1 Y N N N N N 17.178 16.763 -60.558 -0.521 -0.576 -0.281 C4 A1A5I 17 A1A5I C5 C18 C 0 1 Y N N N N N 18.147 17.705 -60.267 -0.975 0.265 0.741 C5 A1A5I 18 A1A5I C6 C19 C 0 1 Y N N N N N 19.334 17.732 -60.993 -0.047 0.907 1.566 C6 A1A5I 19 A1A5I C7 C20 C 0 1 N N N N N N 16.042 16.895 -59.589 -1.751 -1.104 -0.976 C7 A1A5I 20 A1A5I C9 C21 C 0 1 N N N N N N 17.655 18.566 -59.169 -2.448 0.280 0.706 C9 A1A5I 21 A1A5I N16 N1 N 0 1 N N N N N N 14.471 17.558 -55.786 -6.259 0.795 -0.732 N16 A1A5I 22 A1A5I N24 N2 N 0 1 N N N N N N 18.501 13.047 -65.409 5.903 -0.402 -0.212 N24 A1A5I 23 A1A5I N8 N3 N 0 1 N N N N N N 16.457 18.048 -58.786 -2.900 -0.509 -0.284 N8 A1A5I 24 A1A5I O10 O1 O 0 1 N N N N N N 18.713 14.959 -63.312 3.073 -0.322 0.162 O10 A1A5I 25 A1A5I O11 O2 O 0 1 N N N N N N 18.161 19.568 -58.705 -3.154 0.915 1.465 O11 A1A5I 26 A1A5I O18 O3 O 0 1 N N N N N N 16.496 16.739 -56.370 -4.295 1.443 -1.497 O18 A1A5I 27 A1A5I O19 O4 O 0 1 N N N N N N 12.482 18.345 -55.089 -8.216 0.149 0.052 O19 A1A5I 28 A1A5I H1 H1 H 0 1 N N N N N N 20.449 16.842 -62.588 2.017 1.200 2.010 H1 A1A5I 29 A1A5I H2 H2 H 0 1 N N N N N N 16.602 15.131 -61.826 1.169 -1.421 -1.264 H2 A1A5I 30 A1A5I H3 H3 H 0 1 N N N N N N 16.263 19.424 -57.256 -4.376 -1.422 -1.462 H3 A1A5I 31 A1A5I H4 H4 H 0 1 N N N N N N 14.478 20.002 -58.733 -4.619 -2.328 0.808 H4 A1A5I 32 A1A5I H5 H5 H 0 1 N N N N N N 13.769 18.356 -58.603 -4.903 -0.691 1.458 H5 A1A5I 33 A1A5I H6 H6 H 0 1 N N N N N N 14.090 20.410 -56.367 -6.652 -2.173 -0.562 H6 A1A5I 34 A1A5I H7 H7 H 0 1 N N N N N N 12.557 19.880 -57.139 -7.062 -1.821 1.135 H7 A1A5I 35 A1A5I H8 H8 H 0 1 N N N N N N 17.698 13.533 -62.154 3.509 0.238 2.103 H8 A1A5I 36 A1A5I H9 H9 H 0 1 N N N N N N 19.371 11.802 -62.427 3.256 2.271 0.673 H9 A1A5I 37 A1A5I H10 H10 H 0 1 N N N N N N 20.187 13.332 -61.958 4.848 2.210 1.468 H10 A1A5I 38 A1A5I H11 H11 H 0 1 N N N N N N 21.327 12.043 -63.813 4.233 1.352 -1.398 H11 A1A5I 39 A1A5I H12 H12 H 0 1 N N N N N N 20.900 13.739 -64.220 5.110 2.822 -0.909 H12 A1A5I 40 A1A5I H13 H13 H 0 1 N N N N N N 19.407 11.221 -64.999 6.860 1.431 0.156 H13 A1A5I 41 A1A5I H14 H14 H 0 1 N N N N N N 16.726 13.615 -64.432 5.957 -0.025 1.853 H14 A1A5I 42 A1A5I H15 H15 H 0 1 N N N N N N 17.336 11.975 -64.023 5.113 -1.519 1.380 H15 A1A5I 43 A1A5I H16 H16 H 0 1 N N N N N N 17.806 11.605 -66.759 7.766 -0.991 0.560 H16 A1A5I 44 A1A5I H17 H17 H 0 1 N N N N N N 18.256 13.186 -67.484 7.639 -1.033 -1.214 H17 A1A5I 45 A1A5I H18 H18 H 0 1 N N N N N N 15.836 12.828 -67.543 7.623 -3.324 -0.267 H18 A1A5I 46 A1A5I H19 H19 H 0 1 N N N N N N 15.814 12.632 -65.757 6.200 -2.907 0.718 H19 A1A5I 47 A1A5I H20 H20 H 0 1 N N N N N N 16.264 14.213 -66.482 6.073 -2.949 -1.057 H20 A1A5I 48 A1A5I H21 H21 H 0 1 N N N N N N 21.471 11.587 -66.274 6.962 2.046 -2.299 H21 A1A5I 49 A1A5I H22 H22 H 0 1 N N N N N N 19.994 11.736 -67.286 7.866 0.571 -1.881 H22 A1A5I 50 A1A5I H23 H23 H 0 1 N N N N N N 20.873 13.210 -66.758 6.275 0.446 -2.670 H23 A1A5I 51 A1A5I H24 H24 H 0 1 N N N N N N 20.098 18.458 -60.757 -0.388 1.554 2.361 H24 A1A5I 52 A1A5I H25 H25 H 0 1 N N N N N N 15.093 17.092 -60.110 -1.748 -0.802 -2.024 H25 A1A5I 53 A1A5I H26 H26 H 0 1 N N N N N N 15.939 15.992 -58.969 -1.788 -2.190 -0.899 H26 A1A5I 54 A1A5I H27 H27 H 0 1 N N N N N N 14.396 16.834 -55.100 -6.641 1.649 -0.987 H27 A1A5I 55 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1A5I C26 C27 SING N N 1 A1A5I C26 N24 SING N N 2 A1A5I C28 C23 SING N N 3 A1A5I N24 C23 SING N N 4 A1A5I N24 C25 SING N N 5 A1A5I C23 C22 SING N N 6 A1A5I C25 C20 SING N N 7 A1A5I C22 C21 SING N N 8 A1A5I O10 C20 SING N N 9 A1A5I O10 C2 SING N N 10 A1A5I C20 C21 SING N N 11 A1A5I C2 C1 DOUB Y N 12 A1A5I C2 C3 SING Y N 13 A1A5I C1 C6 SING Y N 14 A1A5I C3 C4 DOUB Y N 15 A1A5I C6 C5 DOUB Y N 16 A1A5I C4 C5 SING Y N 17 A1A5I C4 C7 SING N N 18 A1A5I C5 C9 SING N N 19 A1A5I C7 N8 SING N N 20 A1A5I C9 N8 SING N N 21 A1A5I C9 O11 DOUB N N 22 A1A5I N8 C12 SING N N 23 A1A5I C13 C12 SING N N 24 A1A5I C13 C14 SING N N 25 A1A5I C12 C17 SING N N 26 A1A5I C14 C15 SING N N 27 A1A5I C17 O18 DOUB N N 28 A1A5I C17 N16 SING N N 29 A1A5I C15 N16 SING N N 30 A1A5I C15 O19 DOUB N N 31 A1A5I C1 H1 SING N N 32 A1A5I C3 H2 SING N N 33 A1A5I C12 H3 SING N N 34 A1A5I C13 H4 SING N N 35 A1A5I C13 H5 SING N N 36 A1A5I C14 H6 SING N N 37 A1A5I C14 H7 SING N N 38 A1A5I C20 H8 SING N N 39 A1A5I C21 H9 SING N N 40 A1A5I C21 H10 SING N N 41 A1A5I C22 H11 SING N N 42 A1A5I C22 H12 SING N N 43 A1A5I C23 H13 SING N N 44 A1A5I C25 H14 SING N N 45 A1A5I C25 H15 SING N N 46 A1A5I C26 H16 SING N N 47 A1A5I C26 H17 SING N N 48 A1A5I C27 H18 SING N N 49 A1A5I C27 H19 SING N N 50 A1A5I C27 H20 SING N N 51 A1A5I C28 H21 SING N N 52 A1A5I C28 H22 SING N N 53 A1A5I C28 H23 SING N N 54 A1A5I C6 H24 SING N N 55 A1A5I C7 H25 SING N N 56 A1A5I C7 H26 SING N N 57 A1A5I N16 H27 SING N N 58 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1A5I SMILES ACDLabs 14.52 "CCN1CC(Oc2cc3CN(C4CCC(=O)NC4=O)C(=O)c3cc2)CCC1C" A1A5I InChI InChI 1.06 "InChI=1S/C21H27N3O4/c1-3-23-12-16(5-4-13(23)2)28-15-6-7-17-14(10-15)11-24(21(17)27)18-8-9-19(25)22-20(18)26/h6-7,10,13,16,18H,3-5,8-9,11-12H2,1-2H3,(H,22,25,26)/t13-,16+,18-/m0/s1" A1A5I InChIKey InChI 1.06 IHBGNCYMSRWSLK-XCRHUMRWSA-N A1A5I SMILES_CANONICAL CACTVS 3.385 "CCN1C[C@@H](CC[C@@H]1C)Oc2ccc3C(=O)N(Cc3c2)[C@H]4CCC(=O)NC4=O" A1A5I SMILES CACTVS 3.385 "CCN1C[CH](CC[CH]1C)Oc2ccc3C(=O)N(Cc3c2)[CH]4CCC(=O)NC4=O" A1A5I SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCN1C[C@@H](CC[C@@H]1C)Oc2ccc3c(c2)CN(C3=O)[C@H]4CCC(=O)NC4=O" A1A5I SMILES "OpenEye OEToolkits" 2.0.7 "CCN1CC(CCC1C)Oc2ccc3c(c2)CN(C3=O)C4CCC(=O)NC4=O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1A5I "SYSTEMATIC NAME" ACDLabs 14.52 "(3S)-3-(5-{[(3R,6S)-1-ethyl-6-methylpiperidin-3-yl]oxy}-1-oxo-1,3-dihydro-2H-isoindol-2-yl)piperidine-2,6-dione" A1A5I "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(3~{S})-3-[6-[(3~{R},6~{S})-1-ethyl-6-methyl-piperidin-3-yl]oxy-3-oxidanylidene-1~{H}-isoindol-2-yl]piperidine-2,6-dione" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1A5I "Create component" 2024-09-09 RCSB A1A5I "Initial release" 2024-11-27 RCSB #