data_A1A5Z # _chem_comp.id A1A5Z _chem_comp.name "N-ethyl-N'-{4-[(2-oxopyrrolidin-1-yl)amino]-9H-pyrimido[4,5-b]indol-8-yl}urea" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H19 N7 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms AVI-1500 _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-09-10 _chem_comp.pdbx_modified_date 2026-04-03 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 353.378 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1A5Z _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9CXY _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1A5Z N1 N1 N 0 1 N N N N N N 14.584 -0.016 1.374 -4.381 0.771 -0.110 N1 A1A5Z 1 A1A5Z N3 N2 N 0 1 Y N N N N N 14.920 -0.102 4.079 -3.019 -1.637 -0.087 N3 A1A5Z 2 A1A5Z C4 C1 C 0 1 N N N N N N 15.463 -0.755 0.443 -5.233 1.076 -1.265 C4 A1A5Z 3 A1A5Z C5 C2 C 0 1 Y N N N N N 15.026 1.106 3.424 -2.331 -0.499 -0.139 C5 A1A5Z 4 A1A5Z C6 C3 C 0 1 Y N N N N N 14.925 -0.114 5.440 -2.402 -2.803 -0.075 C6 A1A5Z 5 A1A5Z C7 C4 C 0 1 Y N N N N N 15.125 2.137 5.528 -0.317 -1.828 -0.165 C7 A1A5Z 6 A1A5Z C8 C5 C 0 1 Y N N N N N 15.149 2.313 4.127 -0.933 -0.566 -0.180 C8 A1A5Z 7 A1A5Z C10 C6 C 0 1 Y N N N N N 15.373 4.546 2.795 0.175 1.823 -0.278 C10 A1A5Z 8 A1A5Z C13 C7 C 0 1 Y N N N N N 15.432 5.726 5.426 2.562 0.393 -0.312 C13 A1A5Z 9 A1A5Z C15 C8 C 0 1 N N N N N N 15.266 8.948 9.299 7.312 0.268 0.465 C15 A1A5Z 10 A1A5Z C17 C9 C 0 1 Y N N N N N 15.315 4.345 5.167 1.349 -0.296 -0.257 C17 A1A5Z 11 A1A5Z C1 C10 C 0 1 N N N N N N 13.301 -0.624 1.468 -5.115 0.538 0.991 C1 A1A5Z 12 A1A5Z C11 C11 C 0 1 Y N N N N N 15.497 5.917 2.987 1.380 2.487 -0.333 C11 A1A5Z 13 A1A5Z C12 C12 C 0 1 Y N N N N N 15.499 6.502 4.272 2.570 1.777 -0.351 C12 A1A5Z 14 A1A5Z C14 C13 C 0 1 N N N N N N 15.363 7.456 7.233 4.902 0.270 0.109 C14 A1A5Z 15 A1A5Z C16 C14 C 0 1 N N N N N N 15.683 8.867 10.803 8.500 -0.662 0.209 C16 A1A5Z 16 A1A5Z C2 C15 C 0 1 N N N N N N 13.245 -1.858 0.559 -6.588 0.666 0.670 C2 A1A5Z 17 A1A5Z C3 C16 C 0 1 N N N N N N 14.589 -1.870 -0.170 -6.646 0.589 -0.875 C3 A1A5Z 18 A1A5Z C9 C17 C 0 1 Y N N N N N 15.273 3.715 3.902 0.148 0.429 -0.240 C9 A1A5Z 19 A1A5Z N2 N3 N 0 1 N N N N N N 15.026 1.081 2.053 -2.981 0.722 -0.152 N2 A1A5Z 20 A1A5Z N4 N4 N 0 1 Y N N N N N 15.006 0.967 6.247 -1.091 -2.912 -0.113 N4 A1A5Z 21 A1A5Z N5 N5 N 0 1 N N N N N N 15.398 6.155 6.753 3.770 -0.316 -0.330 N5 A1A5Z 22 A1A5Z N6 N6 N 0 1 N N N N N N 15.281 7.638 8.609 6.082 -0.369 -0.013 N6 A1A5Z 23 A1A5Z N7 N7 N 0 1 Y N N N N N 15.221 3.361 6.185 1.043 -1.647 -0.212 N7 A1A5Z 24 A1A5Z O1 O1 O 0 1 N N N N N N 12.381 -0.243 2.168 -4.663 0.265 2.083 O1 A1A5Z 25 A1A5Z O2 O2 O 0 1 N N N N N N 15.456 8.415 6.456 4.858 1.374 0.615 O2 A1A5Z 26 A1A5Z H1 H1 H 0 1 N N N N N N 16.314 -1.191 0.986 -5.243 2.149 -1.454 H1 A1A5Z 27 A1A5Z H2 H2 H 0 1 N N N N N N 14.858 -1.079 5.921 -2.996 -3.704 -0.033 H2 A1A5Z 28 A1A5Z H9 H3 H 0 1 N N N N N N 15.355 4.133 1.797 -0.750 2.381 -0.264 H9 A1A5Z 29 A1A5Z H14 H4 H 0 1 N N N N N N 15.963 9.622 8.780 7.228 0.464 1.534 H14 A1A5Z 30 A1A5Z H15 H5 H 0 1 N N N N N N 14.247 9.360 9.242 7.465 1.207 -0.067 H15 A1A5Z 31 A1A5Z H10 H6 H 0 1 N N N N N N 15.595 6.557 2.123 1.399 3.566 -0.362 H10 A1A5Z 32 A1A5Z H11 H7 H 0 1 N N N N N N 15.554 7.577 4.362 3.510 2.306 -0.395 H11 A1A5Z 33 A1A5Z H16 H8 H 0 1 N N N N N N 15.649 9.872 11.248 9.416 -0.189 0.565 H16 A1A5Z 34 A1A5Z H17 H9 H 0 1 N N N N N N 14.989 8.204 11.341 8.347 -1.602 0.741 H17 A1A5Z 35 A1A5Z H18 H10 H 0 1 N N N N N N 16.705 8.467 10.879 8.584 -0.859 -0.859 H18 A1A5Z 36 A1A5Z H3 H11 H 0 1 N N N N N N 12.416 -1.773 -0.159 -7.148 -0.160 1.109 H3 A1A5Z 37 A1A5Z H4 H12 H 0 1 N N N N N N 13.120 -2.773 1.156 -6.975 1.620 1.028 H4 A1A5Z 38 A1A5Z H5 H13 H 0 1 N N N N N N 14.436 -1.679 -1.242 -7.412 1.258 -1.268 H5 A1A5Z 39 A1A5Z H6 H14 H 0 1 N N N N N N 15.972 1.233 1.765 -2.468 1.544 -0.189 H6 A1A5Z 40 A1A5Z H7 H15 H 0 1 N N N N N N 15.399 5.434 7.446 3.793 -1.229 -0.659 H7 A1A5Z 41 A1A5Z H8 H16 H 0 1 N N N N N N 15.228 6.818 9.179 6.118 -1.250 -0.416 H8 A1A5Z 42 A1A5Z H12 H17 H 0 1 N N N N N N 15.223 3.515 7.173 1.697 -2.363 -0.213 H12 A1A5Z 43 A1A5Z H13 H18 H 0 1 N N N N N N 15.836 -0.084 -0.345 -4.879 0.542 -2.147 H13 A1A5Z 44 A1A5Z H19 H19 H 0 1 N N N N N N 15.079 -2.846 -0.037 -6.814 -0.434 -1.212 H19 A1A5Z 45 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1A5Z C3 C4 SING N N 1 A1A5Z C3 C2 SING N N 2 A1A5Z C4 N1 SING N N 3 A1A5Z C2 C1 SING N N 4 A1A5Z N1 C1 SING N N 5 A1A5Z N1 N2 SING N N 6 A1A5Z C1 O1 DOUB N N 7 A1A5Z N2 C5 SING N N 8 A1A5Z C10 C11 DOUB Y N 9 A1A5Z C10 C9 SING Y N 10 A1A5Z C11 C12 SING Y N 11 A1A5Z C5 N3 DOUB Y N 12 A1A5Z C5 C8 SING Y N 13 A1A5Z C9 C8 SING Y N 14 A1A5Z C9 C17 DOUB Y N 15 A1A5Z N3 C6 SING Y N 16 A1A5Z C8 C7 DOUB Y N 17 A1A5Z C12 C13 DOUB Y N 18 A1A5Z C17 C13 SING Y N 19 A1A5Z C17 N7 SING Y N 20 A1A5Z C13 N5 SING N N 21 A1A5Z C6 N4 DOUB Y N 22 A1A5Z C7 N7 SING Y N 23 A1A5Z C7 N4 SING Y N 24 A1A5Z O2 C14 DOUB N N 25 A1A5Z N5 C14 SING N N 26 A1A5Z C14 N6 SING N N 27 A1A5Z N6 C15 SING N N 28 A1A5Z C15 C16 SING N N 29 A1A5Z C4 H1 SING N N 30 A1A5Z C6 H2 SING N N 31 A1A5Z C10 H9 SING N N 32 A1A5Z C15 H14 SING N N 33 A1A5Z C15 H15 SING N N 34 A1A5Z C11 H10 SING N N 35 A1A5Z C12 H11 SING N N 36 A1A5Z C16 H16 SING N N 37 A1A5Z C16 H17 SING N N 38 A1A5Z C16 H18 SING N N 39 A1A5Z C2 H3 SING N N 40 A1A5Z C2 H4 SING N N 41 A1A5Z C3 H5 SING N N 42 A1A5Z N2 H6 SING N N 43 A1A5Z N5 H7 SING N N 44 A1A5Z N6 H8 SING N N 45 A1A5Z N7 H12 SING N N 46 A1A5Z C4 H13 SING N N 47 A1A5Z C3 H19 SING N N 48 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1A5Z SMILES ACDLabs 14.52 "CCNC(=O)Nc1cccc2c3c(ncnc3[NH]c21)NN1CCCC1=O" A1A5Z InChI InChI 1.06 "InChI=1S/C17H19N7O2/c1-2-18-17(26)21-11-6-3-5-10-13-15(22-14(10)11)19-9-20-16(13)23-24-8-4-7-12(24)25/h3,5-6,9H,2,4,7-8H2,1H3,(H2,18,21,26)(H2,19,20,22,23)" A1A5Z InChIKey InChI 1.06 LEZGKDXUGJKABK-UHFFFAOYSA-N A1A5Z SMILES_CANONICAL CACTVS 3.385 "CCNC(=O)Nc1cccc2c1[nH]c3ncnc(NN4CCCC4=O)c23" A1A5Z SMILES CACTVS 3.385 "CCNC(=O)Nc1cccc2c1[nH]c3ncnc(NN4CCCC4=O)c23" A1A5Z SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCNC(=O)Nc1cccc2c1[nH]c3c2c(ncn3)NN4CCCC4=O" A1A5Z SMILES "OpenEye OEToolkits" 2.0.7 "CCNC(=O)Nc1cccc2c1[nH]c3c2c(ncn3)NN4CCCC4=O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1A5Z "SYSTEMATIC NAME" ACDLabs 14.52 "N-ethyl-N'-{4-[(2-oxopyrrolidin-1-yl)amino]-9H-pyrimido[4,5-b]indol-8-yl}urea" A1A5Z "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "1-ethyl-3-[4-[(2-oxidanylidenepyrrolidin-1-yl)amino]-9~{H}-pyrimido[4,5-b]indol-8-yl]urea" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id A1A5Z _pdbx_chem_comp_synonyms.name AVI-1500 _pdbx_chem_comp_synonyms.provenance AUTHOR _pdbx_chem_comp_synonyms.type ? # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1A5Z "Create component" 2024-09-10 RCSB A1A5Z "Initial release" 2026-04-08 RCSB #