data_A1A66 # _chem_comp.id A1A66 _chem_comp.name "[(6S)-5-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)-5-azaspiro[2.4]heptan-6-yl]methanol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C13 H16 N4 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-09-16 _chem_comp.pdbx_modified_date 2025-06-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 244.292 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1A66 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7HD7 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1A66 O1 O1 O 0 1 N N N N N N 15.705 -2.275 -0.106 -1.474 3.155 0.838 O1 A1A66 1 A1A66 C1 C1 C 0 1 N N N N N N 16.086 -0.996 0.333 -2.451 2.115 0.759 C1 A1A66 2 A1A66 C2 C2 C 0 1 N N S N N N 14.802 -0.357 0.924 -1.894 0.953 -0.066 C2 A1A66 3 A1A66 C3 C3 C 0 1 N N N N N N 13.848 0.071 -0.212 -2.981 -0.130 -0.249 C3 A1A66 4 A1A66 C4 C4 C 0 1 N N N N N N 13.633 1.542 -0.069 -2.186 -1.440 -0.102 C4 A1A66 5 A1A66 C5 C5 C 0 1 N N N N N N 13.032 2.363 -1.203 -2.852 -2.802 -0.153 C5 A1A66 6 A1A66 C6 C6 C 0 1 N N N N N N 12.208 2.067 0.019 -1.912 -2.358 -1.279 C6 A1A66 7 A1A66 C7 C7 C 0 1 N N N N N N 14.745 2.047 0.818 -1.109 -1.085 0.935 C7 A1A66 8 A1A66 C8 C8 C 0 1 Y N N N N N 15.197 0.961 3.060 0.400 0.412 -0.093 C8 A1A66 9 A1A66 C10 C9 C 0 1 Y N N N N N 15.361 2.020 5.241 2.763 0.003 -0.392 C10 A1A66 10 A1A66 C11 C10 C 0 1 Y N N N N N 15.376 2.155 3.817 1.605 -0.115 0.398 C11 A1A66 11 A1A66 C12 C11 C 0 1 Y N N N N N 15.599 3.558 3.599 2.010 -0.813 1.616 C12 A1A66 12 A1A66 C13 C12 C 0 1 Y N N N N N 15.690 4.209 4.815 3.324 -1.066 1.500 C13 A1A66 13 A1A66 C9 C13 C 0 1 Y N N N N N 15.034 -0.187 5.111 1.518 1.089 -1.994 C9 A1A66 14 A1A66 N1 N1 N 0 1 N N N N N N 15.188 0.894 1.650 -0.765 0.327 0.649 N1 A1A66 15 A1A66 N2 N2 N 0 1 Y N N N N N 15.040 -0.213 3.736 0.407 1.001 -1.285 N2 A1A66 16 A1A66 N3 N3 N 0 1 Y N N N N N 15.187 0.856 5.933 2.669 0.610 -1.574 N3 A1A66 17 A1A66 N4 N4 N 0 1 Y N N N N N 15.544 3.255 5.829 3.786 -0.583 0.303 N4 A1A66 18 A1A66 H2 H1 H 0 1 N N N N N N 16.457 -2.719 -0.481 -1.760 3.925 1.348 H2 A1A66 19 A1A66 H4 H2 H 0 1 N N N N N N 16.867 -1.072 1.104 -2.691 1.766 1.763 H4 A1A66 20 A1A66 H3 H3 H 0 1 N N N N N N 16.460 -0.396 -0.510 -3.353 2.500 0.282 H3 A1A66 21 A1A66 H1 H4 H 0 1 N N N N N N 14.300 -1.066 1.599 -1.561 1.316 -1.038 H1 A1A66 22 A1A66 H6 H5 H 0 1 N N N N N N 12.890 -0.462 -0.122 -3.740 -0.050 0.529 H6 A1A66 23 A1A66 H5 H6 H 0 1 N N N N N N 14.301 -0.152 -1.190 -3.432 -0.060 -1.239 H5 A1A66 24 A1A66 H8 H7 H 0 1 N N N N N N 13.390 3.386 -1.389 -2.488 -3.566 0.535 H8 A1A66 25 A1A66 H7 H8 H 0 1 N N N N N N 12.787 1.880 -2.161 -3.919 -2.834 -0.370 H7 A1A66 26 A1A66 H10 H9 H 0 1 N N N N N N 11.963 2.875 0.725 -2.362 -2.097 -2.237 H10 A1A66 27 A1A66 H9 H10 H 0 1 N N N N N N 11.361 1.368 -0.047 -0.931 -2.829 -1.332 H9 A1A66 28 A1A66 H12 H11 H 0 1 N N N N N N 15.581 2.415 0.205 -1.508 -1.181 1.945 H12 A1A66 29 A1A66 H11 H12 H 0 1 N N N N N N 14.377 2.859 1.462 -0.235 -1.722 0.809 H11 A1A66 30 A1A66 H14 H13 H 0 1 N N N N N N 15.683 4.032 2.632 1.375 -1.075 2.449 H14 A1A66 31 A1A66 H15 H14 H 0 1 N N N N N N 15.846 5.268 4.958 3.926 -1.574 2.239 H15 A1A66 32 A1A66 H13 H15 H 0 1 N N N N N N 14.885 -1.142 5.594 1.480 1.575 -2.957 H13 A1A66 33 A1A66 H16 H16 H 0 1 N N N N N N 15.568 3.437 6.812 4.703 -0.647 -0.006 H16 A1A66 34 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1A66 C5 C4 SING N N 1 A1A66 C5 C6 SING N N 2 A1A66 C3 C4 SING N N 3 A1A66 C3 C2 SING N N 4 A1A66 O1 C1 SING N N 5 A1A66 C4 C6 SING N N 6 A1A66 C4 C7 SING N N 7 A1A66 C1 C2 SING N N 8 A1A66 C7 N1 SING N N 9 A1A66 C2 N1 SING N N 10 A1A66 N1 C8 SING N N 11 A1A66 C8 N2 DOUB Y N 12 A1A66 C8 C11 SING Y N 13 A1A66 C12 C11 SING Y N 14 A1A66 C12 C13 DOUB Y N 15 A1A66 N2 C9 SING Y N 16 A1A66 C11 C10 DOUB Y N 17 A1A66 C13 N4 SING Y N 18 A1A66 C9 N3 DOUB Y N 19 A1A66 C10 N4 SING Y N 20 A1A66 C10 N3 SING Y N 21 A1A66 O1 H2 SING N N 22 A1A66 C1 H4 SING N N 23 A1A66 C1 H3 SING N N 24 A1A66 C2 H1 SING N N 25 A1A66 C3 H6 SING N N 26 A1A66 C3 H5 SING N N 27 A1A66 C5 H8 SING N N 28 A1A66 C5 H7 SING N N 29 A1A66 C6 H10 SING N N 30 A1A66 C6 H9 SING N N 31 A1A66 C7 H12 SING N N 32 A1A66 C7 H11 SING N N 33 A1A66 C12 H14 SING N N 34 A1A66 C13 H15 SING N N 35 A1A66 C9 H13 SING N N 36 A1A66 N4 H16 SING N N 37 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1A66 SMILES ACDLabs 14.52 "OCC1CC2(CC2)CN1c1ncnc2[NH]ccc12" A1A66 InChI InChI 1.06 "InChI=1S/C13H16N4O/c18-6-9-5-13(2-3-13)7-17(9)12-10-1-4-14-11(10)15-8-16-12/h1,4,8-9,18H,2-3,5-7H2,(H,14,15,16)/t9-/m0/s1" A1A66 InChIKey InChI 1.06 ZUCSUEFHNVYEEE-VIFPVBQESA-N A1A66 SMILES_CANONICAL CACTVS 3.385 "OC[C@@H]1CC2(CC2)CN1c3ncnc4[nH]ccc34" A1A66 SMILES CACTVS 3.385 "OC[CH]1CC2(CC2)CN1c3ncnc4[nH]ccc34" A1A66 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1c[nH]c2c1c(ncn2)N3CC4(CC4)C[C@H]3CO" A1A66 SMILES "OpenEye OEToolkits" 3.1.0.0 "c1c[nH]c2c1c(ncn2)N3CC4(CC4)CC3CO" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1A66 "SYSTEMATIC NAME" ACDLabs 14.52 "[(6S)-5-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)-5-azaspiro[2.4]heptan-6-yl]methanol" A1A66 "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "[(6~{S})-5-(7~{H}-pyrrolo[2,3-d]pyrimidin-4-yl)-5-azaspiro[2.4]heptan-6-yl]methanol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1A66 "Create component" 2024-09-16 RCSB A1A66 "Initial release" 2025-06-11 RCSB #