data_A1A6B # _chem_comp.id A1A6B _chem_comp.name "(2S)-(2-cyclopropylphenyl){(3R)-3-[4-(5,6,7,8-tetrahydro-1,8-naphthyridin-2-yl)butoxy]pyrrolidin-1-yl}acetic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H35 N3 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-09-11 _chem_comp.pdbx_modified_date 2024-11-08 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 449.585 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1A6B _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9CZA _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1A6B C13 C1 C 0 1 N N N N N N 3.458 -46.102 -20.354 -6.336 2.939 1.686 C13 A1A6B 1 A1A6B N14 N1 N 0 1 N N N N N N 7.365 -45.219 -17.341 -3.543 -1.191 0.275 N14 A1A6B 2 A1A6B C15 C2 C 0 1 N N N N N N 7.911 -43.852 -17.538 -3.104 -2.106 1.359 C15 A1A6B 3 A1A6B C16 C3 C 0 1 N N N N N N 9.137 -44.059 -18.424 -1.569 -2.177 1.163 C16 A1A6B 4 A1A6B C17 C4 C 0 1 N N R N N N 8.736 -45.208 -19.342 -1.206 -0.733 0.747 C17 A1A6B 5 A1A6B C20 C5 C 0 1 N N N N N N 11.572 -46.543 -21.039 2.118 -0.651 -0.940 C20 A1A6B 6 A1A6B C21 C6 C 0 1 N N N N N N 12.934 -46.037 -21.504 3.546 -0.520 -0.407 C21 A1A6B 7 A1A6B C22 C7 C 0 1 N N N N N N 13.870 -47.163 -21.939 4.532 -0.547 -1.576 C22 A1A6B 8 A1A6B C23 C8 C 0 1 Y N N N N N 14.134 -47.055 -23.432 5.938 -0.417 -1.050 C23 A1A6B 9 A1A6B C31 C9 C 0 1 N N N N N N 16.224 -44.616 -26.993 8.991 1.895 1.792 C31 A1A6B 10 A1A6B C02 C10 C 0 1 N N N N N N 5.638 -44.504 -15.766 -5.865 -1.735 0.742 C02 A1A6B 11 A1A6B C04 C11 C 0 1 N N S N N N 5.896 -45.178 -17.104 -4.865 -0.621 0.569 C04 A1A6B 12 A1A6B C05 C12 C 0 1 Y N N N N N 5.428 -46.622 -16.994 -5.294 0.268 -0.570 C05 A1A6B 13 A1A6B C06 C13 C 0 1 Y N N N N N 5.976 -47.460 -16.051 -4.827 0.026 -1.848 C06 A1A6B 14 A1A6B C07 C14 C 0 1 Y N N N N N 5.545 -48.765 -15.973 -5.221 0.841 -2.893 C07 A1A6B 15 A1A6B C08 C15 C 0 1 Y N N N N N 4.572 -49.219 -16.837 -6.081 1.898 -2.659 C08 A1A6B 16 A1A6B C09 C16 C 0 1 Y N N N N N 4.026 -48.375 -17.780 -6.547 2.139 -1.380 C09 A1A6B 17 A1A6B C10 C17 C 0 1 Y N N N N N 4.460 -47.073 -17.851 -6.158 1.321 -0.337 C10 A1A6B 18 A1A6B C11 C18 C 0 1 N N N N N N 3.887 -46.109 -18.885 -6.667 1.584 1.057 C11 A1A6B 19 A1A6B C12 C19 C 0 1 N N N N N N 2.422 -46.335 -19.251 -7.762 2.639 1.222 C12 A1A6B 20 A1A6B C19 C20 C 0 1 N N N N N N 10.810 -45.446 -20.301 1.132 -0.624 0.229 C19 A1A6B 21 A1A6B C25 C21 C 0 1 Y N N N N N 15.255 -46.069 -25.155 7.480 0.765 0.202 C25 A1A6B 22 A1A6B C26 C22 C 0 1 Y N N N N N 14.587 -46.851 -26.068 8.474 -0.161 -0.083 C26 A1A6B 23 A1A6B C27 C23 C 0 1 Y N N N N N 13.649 -47.769 -25.661 8.172 -1.245 -0.891 C27 A1A6B 24 A1A6B C28 C24 C 0 1 Y N N N N N 13.425 -47.870 -24.303 6.880 -1.371 -1.381 C28 A1A6B 25 A1A6B C29 C25 C 0 1 N N N N N N 14.874 -46.687 -27.549 9.870 -0.019 0.461 C29 A1A6B 26 A1A6B C30 C26 C 0 1 N N N N N N 15.096 -45.206 -27.836 10.134 1.428 0.881 C30 A1A6B 27 A1A6B C33 C27 C 0 1 N N N N N N 7.624 -45.955 -18.608 -2.514 -0.132 0.199 C33 A1A6B 28 A1A6B N24 N2 N 0 1 Y N N N N N 15.019 -46.189 -23.859 6.255 0.608 -0.285 N24 A1A6B 29 A1A6B N32 N3 N 0 1 N N N N N N 16.269 -45.064 -25.569 7.752 1.876 0.998 N32 A1A6B 30 A1A6B O01 O1 O 0 1 N N N N N N 6.547 -44.489 -14.941 -6.945 -1.552 1.519 O01 A1A6B 31 A1A6B O03 O2 O 0 1 N N N N N N 4.555 -43.965 -15.474 -5.695 -2.792 0.182 O03 A1A6B 32 A1A6B O18 O3 O 0 1 N N N N N N 9.811 -46.051 -19.562 -0.202 -0.747 -0.269 O18 A1A6B 33 A1A6B H1 H1 H 0 1 N N N N N N 3.752 -46.929 -21.017 -6.150 2.964 2.760 H1 A1A6B 34 A1A6B H2 H2 H 0 1 N N N N N N 3.455 -45.160 -20.922 -5.750 3.640 1.091 H2 A1A6B 35 A1A6B H4 H4 H 0 1 N N N N N N 8.197 -43.404 -16.575 -3.348 -1.689 2.336 H4 A1A6B 36 A1A6B H5 H5 H 0 1 N N N N N N 7.174 -43.206 -18.038 -3.556 -3.091 1.239 H5 A1A6B 37 A1A6B H6 H6 H 0 1 N N N N N N 10.016 -44.329 -17.820 -1.073 -2.446 2.096 H6 A1A6B 38 A1A6B H7 H7 H 0 1 N N N N N N 9.357 -43.152 -19.006 -1.313 -2.884 0.375 H7 A1A6B 39 A1A6B H8 H8 H 0 1 N N N N N N 8.342 -44.802 -20.286 -0.862 -0.165 1.612 H8 A1A6B 40 A1A6B H9 H9 H 0 1 N N N N N N 10.987 -46.862 -21.915 1.904 0.178 -1.615 H9 A1A6B 41 A1A6B H10 H10 H 0 1 N N N N N N 11.717 -47.399 -20.363 2.016 -1.593 -1.479 H10 A1A6B 42 A1A6B H11 H11 H 0 1 N N N N N N 13.406 -45.489 -20.676 3.647 0.422 0.132 H11 A1A6B 43 A1A6B H12 H12 H 0 1 N N N N N N 12.784 -45.357 -22.355 3.759 -1.349 0.268 H12 A1A6B 44 A1A6B H13 H13 H 0 1 N N N N N N 13.402 -48.134 -21.719 4.430 -1.489 -2.115 H13 A1A6B 45 A1A6B H14 H14 H 0 1 N N N N N N 14.821 -47.081 -21.392 4.318 0.282 -2.251 H14 A1A6B 46 A1A6B H15 H15 H 0 1 N N N N N N 17.179 -44.892 -27.465 8.890 1.228 2.648 H15 A1A6B 47 A1A6B H16 H16 H 0 1 N N N N N N 5.371 -44.655 -17.917 -4.811 -0.035 1.487 H16 A1A6B 48 A1A6B H17 H17 H 0 1 N N N N N N 6.738 -47.097 -15.377 -4.155 -0.799 -2.031 H17 A1A6B 49 A1A6B H18 H18 H 0 1 N N N N N N 5.968 -49.432 -15.236 -4.856 0.653 -3.892 H18 A1A6B 50 A1A6B H19 H19 H 0 1 N N N N N N 4.235 -50.243 -16.775 -6.388 2.535 -3.475 H19 A1A6B 51 A1A6B H20 H20 H 0 1 N N N N N N 3.264 -48.733 -18.457 -7.219 2.965 -1.198 H20 A1A6B 52 A1A6B H21 H21 H 0 1 N N N N N N 4.024 -45.074 -18.538 -6.699 0.717 1.717 H21 A1A6B 53 A1A6B H22 H22 H 0 1 N N N N N N 1.674 -45.561 -19.027 -8.516 2.467 1.991 H22 A1A6B 54 A1A6B H23 H23 H 0 1 N N N N N N 1.970 -47.330 -19.122 -8.115 3.143 0.322 H23 A1A6B 55 A1A6B H24 H24 H 0 1 N N N N N N 11.492 -44.901 -19.632 1.345 -1.454 0.904 H24 A1A6B 56 A1A6B H25 H25 H 0 1 N N N N N N 10.368 -44.745 -21.025 1.233 0.318 0.768 H25 A1A6B 57 A1A6B H26 H26 H 0 1 N N N N N N 13.113 -48.382 -26.370 8.927 -1.980 -1.131 H26 A1A6B 58 A1A6B H27 H27 H 0 1 N N N N N N 12.704 -48.578 -23.921 6.614 -2.205 -2.013 H27 A1A6B 59 A1A6B H28 H28 H 0 1 N N N N N N 14.019 -47.055 -28.136 9.988 -0.672 1.326 H28 A1A6B 60 A1A6B H29 H29 H 0 1 N N N N N N 15.776 -47.257 -27.818 10.587 -0.305 -0.308 H29 A1A6B 61 A1A6B H30 H30 H 0 1 N N N N N N 15.349 -45.086 -28.900 10.178 2.062 -0.004 H30 A1A6B 62 A1A6B H31 H31 H 0 1 N N N N N N 14.167 -44.660 -27.616 11.078 1.485 1.421 H31 A1A6B 63 A1A6B H32 H32 H 0 1 N N N N N N 6.713 -45.977 -19.225 -2.374 0.177 -0.837 H32 A1A6B 64 A1A6B H33 H33 H 0 1 N N N N N N 7.943 -46.985 -18.388 -2.814 0.722 0.807 H33 A1A6B 65 A1A6B H34 H34 H 0 1 N N N N N N 6.257 -44.037 -14.158 -7.558 -2.296 1.599 H34 A1A6B 66 A1A6B H3 H3 H 0 1 N N N N N N 16.114 -43.521 -27.000 9.193 2.909 2.136 H3 A1A6B 67 A1A6B H35 H35 H 0 1 N N N N N N 17.173 -45.459 -25.404 7.132 2.620 1.036 H35 A1A6B 68 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1A6B C30 C29 SING N N 1 A1A6B C30 C31 SING N N 2 A1A6B C29 C26 SING N N 3 A1A6B C31 N32 SING N N 4 A1A6B C26 C27 DOUB Y N 5 A1A6B C26 C25 SING Y N 6 A1A6B C27 C28 SING Y N 7 A1A6B N32 C25 SING N N 8 A1A6B C25 N24 DOUB Y N 9 A1A6B C28 C23 DOUB Y N 10 A1A6B N24 C23 SING Y N 11 A1A6B C23 C22 SING N N 12 A1A6B C22 C21 SING N N 13 A1A6B C21 C20 SING N N 14 A1A6B C20 C19 SING N N 15 A1A6B C13 C12 SING N N 16 A1A6B C13 C11 SING N N 17 A1A6B C19 O18 SING N N 18 A1A6B O18 C17 SING N N 19 A1A6B C17 C33 SING N N 20 A1A6B C17 C16 SING N N 21 A1A6B C12 C11 SING N N 22 A1A6B C11 C10 SING N N 23 A1A6B C33 N14 SING N N 24 A1A6B C16 C15 SING N N 25 A1A6B C10 C09 DOUB Y N 26 A1A6B C10 C05 SING Y N 27 A1A6B C09 C08 SING Y N 28 A1A6B C15 N14 SING N N 29 A1A6B N14 C04 SING N N 30 A1A6B C04 C05 SING N N 31 A1A6B C04 C02 SING N N 32 A1A6B C05 C06 DOUB Y N 33 A1A6B C08 C07 DOUB Y N 34 A1A6B C06 C07 SING Y N 35 A1A6B C02 O03 DOUB N N 36 A1A6B C02 O01 SING N N 37 A1A6B C13 H1 SING N N 38 A1A6B C13 H2 SING N N 39 A1A6B C15 H4 SING N N 40 A1A6B C15 H5 SING N N 41 A1A6B C16 H6 SING N N 42 A1A6B C16 H7 SING N N 43 A1A6B C17 H8 SING N N 44 A1A6B C20 H9 SING N N 45 A1A6B C20 H10 SING N N 46 A1A6B C21 H11 SING N N 47 A1A6B C21 H12 SING N N 48 A1A6B C22 H13 SING N N 49 A1A6B C22 H14 SING N N 50 A1A6B C31 H15 SING N N 51 A1A6B C04 H16 SING N N 52 A1A6B C06 H17 SING N N 53 A1A6B C07 H18 SING N N 54 A1A6B C08 H19 SING N N 55 A1A6B C09 H20 SING N N 56 A1A6B C11 H21 SING N N 57 A1A6B C12 H22 SING N N 58 A1A6B C12 H23 SING N N 59 A1A6B C19 H24 SING N N 60 A1A6B C19 H25 SING N N 61 A1A6B C27 H26 SING N N 62 A1A6B C28 H27 SING N N 63 A1A6B C29 H28 SING N N 64 A1A6B C29 H29 SING N N 65 A1A6B C30 H30 SING N N 66 A1A6B C30 H31 SING N N 67 A1A6B C33 H32 SING N N 68 A1A6B C33 H33 SING N N 69 A1A6B O01 H34 SING N N 70 A1A6B C31 H3 SING N N 71 A1A6B N32 H35 SING N N 72 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1A6B SMILES ACDLabs 14.52 "OC(=O)C(c1ccccc1C1CC1)N1CCC(OCCCCc2ccc3CCCNc3n2)C1" A1A6B InChI InChI 1.06 "InChI=1S/C27H35N3O3/c31-27(32)25(24-9-2-1-8-23(24)19-10-11-19)30-16-14-22(18-30)33-17-4-3-7-21-13-12-20-6-5-15-28-26(20)29-21/h1-2,8-9,12-13,19,22,25H,3-7,10-11,14-18H2,(H,28,29)(H,31,32)/t22-,25+/m1/s1" A1A6B InChIKey InChI 1.06 NVMSPQJFCGQPIS-RDGATRHJSA-N A1A6B SMILES_CANONICAL CACTVS 3.385 "OC(=O)[C@@H](N1CC[C@H](C1)OCCCCc2ccc3CCCNc3n2)c4ccccc4C5CC5" A1A6B SMILES CACTVS 3.385 "OC(=O)[CH](N1CC[CH](C1)OCCCCc2ccc3CCCNc3n2)c4ccccc4C5CC5" A1A6B SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(c(c1)C2CC2)[C@@H](C(=O)O)N3CC[C@H](C3)OCCCCc4ccc5c(n4)NCCC5" A1A6B SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(c(c1)C2CC2)C(C(=O)O)N3CCC(C3)OCCCCc4ccc5c(n4)NCCC5" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1A6B "SYSTEMATIC NAME" ACDLabs 14.52 "(2S)-(2-cyclopropylphenyl){(3R)-3-[4-(5,6,7,8-tetrahydro-1,8-naphthyridin-2-yl)butoxy]pyrrolidin-1-yl}acetic acid" A1A6B "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{S})-2-(2-cyclopropylphenyl)-2-[(3~{R})-3-[4-(5,6,7,8-tetrahydro-1,8-naphthyridin-2-yl)butoxy]pyrrolidin-1-yl]ethanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1A6B "Create component" 2024-09-11 RCSB A1A6B "Initial release" 2024-11-13 RCSB #