data_A1A6H # _chem_comp.id A1A6H _chem_comp.name "(2S)-{5-fluoro-2-[(2S)-oxan-2-yl]phenyl}{(3R)-3-[4-(5,6,7,8-tetrahydro-1,8-naphthyridin-2-yl)butoxy]pyrrolidin-1-yl}acetic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C29 H38 F N3 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-09-12 _chem_comp.pdbx_modified_date 2024-11-08 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 511.628 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1A6H _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9CZD _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1A6H C10 C1 C 0 1 Y N N N N N 4.064 -48.669 -17.795 7.026 -0.552 1.003 C10 A1A6H 1 A1A6H C13 C2 C 0 1 N N N N N N 2.232 -46.971 -18.900 6.364 1.520 -1.526 C13 A1A6H 2 A1A6H C12 C3 C 0 1 N N S N N N 3.649 -46.446 -18.828 5.821 1.340 -0.105 C12 A1A6H 3 A1A6H C11 C4 C 0 1 Y N N N N N 4.380 -47.331 -17.841 5.926 -0.109 0.293 C11 A1A6H 4 A1A6H O17 O1 O 0 1 N N N N N N 4.239 -46.569 -20.048 6.586 2.140 0.799 O17 A1A6H 5 A1A6H C16 C5 C 0 1 N N N N N N 3.691 -45.660 -20.918 6.534 3.542 0.525 C16 A1A6H 6 A1A6H C15 C6 C 0 1 N N N N N N 2.239 -46.003 -21.220 7.105 3.809 -0.870 C15 A1A6H 7 A1A6H C14 C7 C 0 1 N N N N N N 1.441 -46.188 -19.937 6.310 3.004 -1.901 C14 A1A6H 8 A1A6H C24 C8 C 0 1 N N N N N N 11.781 -46.195 -20.521 -3.048 1.465 0.302 C24 A1A6H 9 A1A6H C23 C9 C 0 1 N N N N N N 10.345 -45.706 -20.633 -1.976 0.375 0.248 C23 A1A6H 10 A1A6H C25 C10 C 0 1 N N N N N N 12.282 -46.622 -21.893 -4.433 0.816 0.358 C25 A1A6H 11 A1A6H C27 C11 C 0 1 Y N N N N N 14.072 -47.005 -23.411 -6.869 1.267 0.468 C27 A1A6H 12 A1A6H C20 C12 C 0 1 N N N N N N 8.796 -43.983 -18.504 0.979 -0.202 1.558 C20 A1A6H 13 A1A6H C19 C13 C 0 1 N N N N N N 7.524 -43.833 -17.674 2.432 -0.626 1.229 C19 A1A6H 14 A1A6H N18 N1 N 0 1 N N N N N N 7.151 -45.233 -17.349 2.819 0.216 0.077 N18 A1A6H 15 A1A6H C02 C14 C 0 1 N N N N N N 5.421 -44.702 -15.679 2.998 -1.690 -1.420 C02 A1A6H 16 A1A6H C04 C15 C 0 1 N N S N N N 5.691 -45.334 -17.035 3.723 -0.510 -0.825 C04 A1A6H 17 A1A6H C05 C16 C 0 1 Y N N N N N 5.323 -46.810 -16.986 4.922 -0.994 -0.051 C05 A1A6H 18 A1A6H C06 C17 C 0 1 Y N N N N N 5.963 -47.642 -16.098 5.017 -2.324 0.314 C06 A1A6H 19 A1A6H C07 C18 C 0 1 Y N N N N N 5.644 -48.984 -16.066 6.119 -2.769 1.025 C07 A1A6H 20 A1A6H C09 C19 C 0 1 Y N N N N N 4.702 -49.509 -16.907 7.124 -1.882 1.369 C09 A1A6H 21 A1A6H C21 C20 C 0 1 N N R N N N 8.555 -45.229 -19.337 0.396 0.045 0.142 C21 A1A6H 22 A1A6H C26 C21 C 0 1 N N N N N N 13.741 -47.075 -21.941 -5.505 1.906 0.412 C26 A1A6H 23 A1A6H C29 C22 C 0 1 Y N N N N N 15.153 -46.074 -25.184 -8.412 -0.182 -0.460 C29 A1A6H 24 A1A6H C30 C23 C 0 1 Y N N N N N 14.521 -46.915 -26.062 -9.328 0.094 0.546 C30 A1A6H 25 A1A6H C31 C24 C 0 1 Y N N N N N 13.615 -47.842 -25.597 -8.988 1.000 1.536 C31 A1A6H 26 A1A6H C32 C25 C 0 1 Y N N N N N 13.394 -47.871 -24.236 -7.734 1.595 1.492 C32 A1A6H 27 A1A6H C33 C26 C 0 1 N N N N N N 14.842 -46.813 -27.542 -10.681 -0.564 0.588 C33 A1A6H 28 A1A6H C34 C27 C 0 1 N N N N N N 14.997 -45.365 -27.982 -11.053 -1.109 -0.791 C34 A1A6H 29 A1A6H C35 C28 C 0 1 N N N N N N 15.693 -44.465 -26.963 -9.891 -1.962 -1.316 C35 A1A6H 30 A1A6H C37 C29 C 0 1 N N N N N N 7.512 -46.027 -18.563 1.594 0.637 -0.629 C37 A1A6H 31 A1A6H F08 F1 F 0 1 N N N N N N 6.286 -49.829 -15.153 6.213 -4.069 1.382 F08 A1A6H 32 A1A6H N28 N2 N 0 1 Y N N N N N 14.922 -46.120 -23.880 -7.223 0.406 -0.466 N28 A1A6H 33 A1A6H N36 N3 N 0 1 N N N N N N 16.127 -45.100 -25.692 -8.727 -1.077 -1.481 N36 A1A6H 34 A1A6H O01 O2 O 0 1 N N N N N N 4.332 -44.558 -15.264 1.969 -2.080 -0.923 O01 A1A6H 35 A1A6H O03 O3 O 0 1 N N N N N N 6.310 -44.339 -15.022 3.497 -2.307 -2.503 O03 A1A6H 36 A1A6H O22 O4 O 0 1 N N N N N N 9.726 -45.935 -19.432 -0.683 0.980 0.196 O22 A1A6H 37 A1A6H H1 H1 H 0 1 N N N N N N 3.310 -49.065 -18.460 7.812 0.140 1.268 H1 A1A6H 38 A1A6H H2 H2 H 0 1 N N N N N N 1.752 -46.861 -17.916 7.395 1.170 -1.569 H2 A1A6H 39 A1A6H H3 H3 H 0 1 N N N N N N 2.251 -48.034 -19.182 5.755 0.944 -2.223 H3 A1A6H 40 A1A6H H4 H4 H 0 1 N N N N N N 3.646 -45.406 -18.469 4.777 1.652 -0.073 H4 A1A6H 41 A1A6H H5 H5 H 0 1 N N N N N N 4.265 -45.668 -21.856 5.500 3.882 0.566 H5 A1A6H 42 A1A6H H6 H6 H 0 1 N N N N N N 3.738 -44.657 -20.468 7.123 4.079 1.269 H6 A1A6H 43 A1A6H H7 H7 H 0 1 N N N N N N 1.792 -45.187 -21.807 7.026 4.872 -1.098 H7 A1A6H 44 A1A6H H8 H8 H 0 1 N N N N N N 2.204 -46.935 -21.802 8.152 3.506 -0.899 H8 A1A6H 45 A1A6H H9 H9 H 0 1 N N N N N N 1.191 -45.199 -19.525 6.746 3.146 -2.890 H9 A1A6H 46 A1A6H H10 H10 H 0 1 N N N N N N 0.514 -46.734 -20.167 5.273 3.341 -1.907 H10 A1A6H 47 A1A6H H11 H11 H 0 1 N N N N N N 11.824 -47.052 -19.833 -2.898 2.078 1.191 H11 A1A6H 48 A1A6H H12 H12 H 0 1 N N N N N N 12.415 -45.383 -20.136 -2.976 2.090 -0.588 H12 A1A6H 49 A1A6H H13 H13 H 0 1 N N N N N N 10.334 -44.630 -20.860 -2.049 -0.251 1.138 H13 A1A6H 50 A1A6H H14 H14 H 0 1 N N N N N N 9.825 -46.255 -21.432 -2.126 -0.239 -0.641 H14 A1A6H 51 A1A6H H15 H15 H 0 1 N N N N N N 12.168 -45.769 -22.578 -4.583 0.203 -0.530 H15 A1A6H 52 A1A6H H16 H16 H 0 1 N N N N N N 11.655 -47.457 -22.240 -4.505 0.191 1.248 H16 A1A6H 53 A1A6H H17 H17 H 0 1 N N N N N N 9.673 -44.113 -17.853 0.444 -1.005 2.066 H17 A1A6H 54 A1A6H H18 H18 H 0 1 N N N N N N 8.946 -43.105 -19.150 0.963 0.712 2.152 H18 A1A6H 55 A1A6H H19 H19 H 0 1 N N N N N N 7.719 -43.256 -16.758 3.086 -0.429 2.079 H19 A1A6H 56 A1A6H H20 H20 H 0 1 N N N N N N 6.731 -43.341 -18.256 2.467 -1.681 0.958 H20 A1A6H 57 A1A6H H22 H22 H 0 1 N N N N N N 5.099 -44.826 -17.810 4.051 0.156 -1.623 H22 A1A6H 58 A1A6H H23 H23 H 0 1 N N N N N N 6.712 -47.247 -15.428 4.232 -3.015 0.045 H23 A1A6H 59 A1A6H H24 H24 H 0 1 N N N N N N 4.462 -50.562 -16.876 7.985 -2.228 1.920 H24 A1A6H 60 A1A6H H25 H25 H 0 1 N N N N N N 8.156 -44.950 -20.323 0.072 -0.893 -0.310 H25 A1A6H 61 A1A6H H26 H26 H 0 1 N N N N N N 13.849 -48.101 -21.560 -5.355 2.520 1.301 H26 A1A6H 62 A1A6H H27 H27 H 0 1 N N N N N N 14.384 -46.399 -21.359 -5.432 2.532 -0.477 H27 A1A6H 63 A1A6H H28 H28 H 0 1 N N N N N N 13.101 -48.515 -26.267 -9.682 1.237 2.329 H28 A1A6H 64 A1A6H H29 H29 H 0 1 N N N N N N 12.688 -48.574 -23.818 -7.439 2.305 2.250 H29 A1A6H 65 A1A6H H30 H30 H 0 1 N N N N N N 14.026 -47.276 -28.117 -10.660 -1.384 1.306 H30 A1A6H 66 A1A6H H31 H31 H 0 1 N N N N N N 15.781 -47.349 -27.741 -11.428 0.167 0.897 H31 A1A6H 67 A1A6H H32 H32 H 0 1 N N N N N N 15.584 -45.349 -28.912 -11.950 -1.722 -0.712 H32 A1A6H 68 A1A6H H33 H33 H 0 1 N N N N N N 13.995 -44.955 -28.174 -11.235 -0.279 -1.475 H33 A1A6H 69 A1A6H H34 H34 H 0 1 N N N N N N 16.587 -44.045 -27.447 -9.663 -2.754 -0.603 H34 A1A6H 70 A1A6H H35 H35 H 0 1 N N N N N N 14.997 -43.652 -26.708 -10.159 -2.398 -2.279 H35 A1A6H 71 A1A6H H36 H36 H 0 1 N N N N N N 6.620 -46.185 -19.187 1.528 1.725 -0.639 H36 A1A6H 72 A1A6H H37 H37 H 0 1 N N N N N N 7.929 -47.001 -18.265 1.604 0.254 -1.649 H37 A1A6H 73 A1A6H H38 H38 H 0 1 N N N N N N 16.996 -45.569 -25.849 -8.184 -1.122 -2.283 H38 A1A6H 74 A1A6H H39 H39 H 0 1 N N N N N N 5.976 -43.967 -14.214 2.997 -3.059 -2.849 H39 A1A6H 75 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1A6H C34 C33 SING N N 1 A1A6H C34 C35 SING N N 2 A1A6H C33 C30 SING N N 3 A1A6H C35 N36 SING N N 4 A1A6H C30 C31 DOUB Y N 5 A1A6H C30 C29 SING Y N 6 A1A6H N36 C29 SING N N 7 A1A6H C31 C32 SING Y N 8 A1A6H C29 N28 DOUB Y N 9 A1A6H C32 C27 DOUB Y N 10 A1A6H N28 C27 SING Y N 11 A1A6H C27 C26 SING N N 12 A1A6H C26 C25 SING N N 13 A1A6H C25 C24 SING N N 14 A1A6H C15 C16 SING N N 15 A1A6H C15 C14 SING N N 16 A1A6H C16 O17 SING N N 17 A1A6H C23 C24 SING N N 18 A1A6H C23 O22 SING N N 19 A1A6H O17 C12 SING N N 20 A1A6H C14 C13 SING N N 21 A1A6H O22 C21 SING N N 22 A1A6H C21 C37 SING N N 23 A1A6H C21 C20 SING N N 24 A1A6H C13 C12 SING N N 25 A1A6H C12 C11 SING N N 26 A1A6H C37 N18 SING N N 27 A1A6H C20 C19 SING N N 28 A1A6H C11 C10 DOUB Y N 29 A1A6H C11 C05 SING Y N 30 A1A6H C10 C09 SING Y N 31 A1A6H C19 N18 SING N N 32 A1A6H N18 C04 SING N N 33 A1A6H C04 C05 SING N N 34 A1A6H C04 C02 SING N N 35 A1A6H C05 C06 DOUB Y N 36 A1A6H C09 C07 DOUB Y N 37 A1A6H C06 C07 SING Y N 38 A1A6H C07 F08 SING N N 39 A1A6H C02 O01 DOUB N N 40 A1A6H C02 O03 SING N N 41 A1A6H C10 H1 SING N N 42 A1A6H C13 H2 SING N N 43 A1A6H C13 H3 SING N N 44 A1A6H C12 H4 SING N N 45 A1A6H C16 H5 SING N N 46 A1A6H C16 H6 SING N N 47 A1A6H C15 H7 SING N N 48 A1A6H C15 H8 SING N N 49 A1A6H C14 H9 SING N N 50 A1A6H C14 H10 SING N N 51 A1A6H C24 H11 SING N N 52 A1A6H C24 H12 SING N N 53 A1A6H C23 H13 SING N N 54 A1A6H C23 H14 SING N N 55 A1A6H C25 H15 SING N N 56 A1A6H C25 H16 SING N N 57 A1A6H C20 H17 SING N N 58 A1A6H C20 H18 SING N N 59 A1A6H C19 H19 SING N N 60 A1A6H C19 H20 SING N N 61 A1A6H C04 H22 SING N N 62 A1A6H C06 H23 SING N N 63 A1A6H C09 H24 SING N N 64 A1A6H C21 H25 SING N N 65 A1A6H C26 H26 SING N N 66 A1A6H C26 H27 SING N N 67 A1A6H C31 H28 SING N N 68 A1A6H C32 H29 SING N N 69 A1A6H C33 H30 SING N N 70 A1A6H C33 H31 SING N N 71 A1A6H C34 H32 SING N N 72 A1A6H C34 H33 SING N N 73 A1A6H C35 H34 SING N N 74 A1A6H C35 H35 SING N N 75 A1A6H C37 H36 SING N N 76 A1A6H C37 H37 SING N N 77 A1A6H N36 H38 SING N N 78 A1A6H O03 H39 SING N N 79 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1A6H SMILES ACDLabs 14.52 "O=C(O)C(c1cc(F)ccc1C1CCCCO1)N1CCC(OCCCCc2ccc3CCCNc3n2)C1" A1A6H InChI InChI 1.06 "InChI=1S/C29H38FN3O4/c30-21-10-12-24(26-8-2-4-17-37-26)25(18-21)27(29(34)35)33-15-13-23(19-33)36-16-3-1-7-22-11-9-20-6-5-14-31-28(20)32-22/h9-12,18,23,26-27H,1-8,13-17,19H2,(H,31,32)(H,34,35)/t23-,26+,27+/m1/s1" A1A6H InChIKey InChI 1.06 MWFFPXLWFCYACI-NPAAKHOSSA-N A1A6H SMILES_CANONICAL CACTVS 3.385 "OC(=O)[C@@H](N1CC[C@H](C1)OCCCCc2ccc3CCCNc3n2)c4cc(F)ccc4[C@@H]5CCCCO5" A1A6H SMILES CACTVS 3.385 "OC(=O)[CH](N1CC[CH](C1)OCCCCc2ccc3CCCNc3n2)c4cc(F)ccc4[CH]5CCCCO5" A1A6H SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1F)[C@@H](C(=O)O)N2CC[C@H](C2)OCCCCc3ccc4c(n3)NCCC4)[C@@H]5CCCCO5" A1A6H SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1F)C(C(=O)O)N2CCC(C2)OCCCCc3ccc4c(n3)NCCC4)C5CCCCO5" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1A6H "SYSTEMATIC NAME" ACDLabs 14.52 "(2S)-{5-fluoro-2-[(2S)-oxan-2-yl]phenyl}{(3R)-3-[4-(5,6,7,8-tetrahydro-1,8-naphthyridin-2-yl)butoxy]pyrrolidin-1-yl}acetic acid" A1A6H "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{S})-2-[5-fluoranyl-2-[(2~{S})-oxan-2-yl]phenyl]-2-[(3~{R})-3-[4-(5,6,7,8-tetrahydro-1,8-naphthyridin-2-yl)butoxy]pyrrolidin-1-yl]ethanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1A6H "Create component" 2024-09-12 RCSB A1A6H "Initial release" 2024-11-13 RCSB #