data_A1A6P # _chem_comp.id A1A6P _chem_comp.name "(3R,5R)-5-(hydroxymethyl)-1-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)pyrrolidin-3-ol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C11 H14 N4 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-09-13 _chem_comp.pdbx_modified_date 2025-06-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 234.254 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1A6P _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7HCV _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1A6P N2 N1 N 0 1 Y N N N N N 14.614 -0.171 4.182 -0.129 1.513 0.247 N2 A1A6P 1 A1A6P C3 C1 C 0 1 N N N N N N 13.578 0.083 -0.070 2.815 -0.827 -0.746 C3 A1A6P 2 A1A6P C6 C2 C 0 1 Y N N N N N 14.582 0.981 3.446 -0.243 0.203 0.443 C6 A1A6P 3 A1A6P C9 C3 C 0 1 Y N N N N N 14.949 2.195 4.090 -1.523 -0.370 0.389 C9 A1A6P 4 A1A6P C1 C4 C 0 1 N N N N N N 12.611 -1.154 1.963 0.500 -0.776 -1.731 C1 A1A6P 5 A1A6P C10 C5 C 0 1 Y N N N N N 15.101 3.618 3.829 -2.061 -1.720 0.543 C10 A1A6P 6 A1A6P C11 C6 C 0 1 Y N N N N N 15.520 4.255 4.987 -3.391 -1.629 0.378 C11 A1A6P 7 A1A6P C2 C7 C 0 1 N N R N N N 13.845 -0.349 1.387 1.342 -1.238 -0.539 C2 A1A6P 8 A1A6P C4 C8 C 0 1 N N R N N N 13.123 1.543 0.008 3.266 -0.414 0.680 C4 A1A6P 9 A1A6P C5 C9 C 0 1 N N N N N N 13.832 2.080 1.273 1.978 0.239 1.239 C5 A1A6P 10 A1A6P C7 C10 C 0 1 Y N N N N N 14.973 -0.127 5.503 -1.191 2.261 0.008 C7 A1A6P 11 A1A6P C8 C11 C 0 1 Y N N N N N 15.303 2.103 5.464 -2.625 0.466 0.131 C8 A1A6P 12 A1A6P N1 N2 N 0 1 N N N N N N 14.163 0.899 2.119 0.873 -0.577 0.692 N1 A1A6P 13 A1A6P N3 N3 N 0 1 Y N N N N N 15.320 0.942 6.209 -2.409 1.768 -0.051 N3 A1A6P 14 A1A6P N4 N4 N 0 1 Y N N N N N 15.632 3.314 6.011 -3.740 -0.326 0.131 N4 A1A6P 15 A1A6P O1 O1 O 0 1 N N N N N N 11.535 -0.263 2.209 0.693 0.625 -1.936 O1 A1A6P 16 A1A6P O2 O2 O 0 1 N N N N N N 11.711 1.566 0.175 4.337 0.531 0.624 O2 A1A6P 17 A1A6P H7 H1 H 0 1 N N N N N N 12.790 -0.541 -0.517 3.403 -1.670 -1.108 H7 A1A6P 18 A1A6P H6 H2 H 0 1 N N N N N N 14.496 -0.001 -0.669 2.886 0.017 -1.432 H6 A1A6P 19 A1A6P H5 H3 H 0 1 N N N N N N 12.297 -1.915 1.233 0.807 -1.320 -2.624 H5 A1A6P 20 A1A6P H4 H4 H 0 1 N N N N N N 12.901 -1.646 2.903 -0.553 -0.973 -1.529 H4 A1A6P 21 A1A6P H12 H5 H 0 1 N N N N N N 14.916 4.102 2.882 -1.498 -2.618 0.749 H12 A1A6P 22 A1A6P H13 H6 H 0 1 N N N N N N 15.727 5.311 5.081 -4.081 -2.458 0.431 H13 A1A6P 23 A1A6P H1 H7 H 0 1 N N N N N N 14.722 -1.013 1.400 1.270 -2.320 -0.432 H1 A1A6P 24 A1A6P H2 H8 H 0 1 N N N N N N 13.449 2.100 -0.883 3.549 -1.287 1.268 H2 A1A6P 25 A1A6P H9 H9 H 0 1 N N N N N N 14.752 2.614 0.993 1.975 0.201 2.328 H9 A1A6P 26 A1A6P H10 H10 H 0 1 N N N N N N 13.164 2.762 1.820 1.895 1.270 0.894 H10 A1A6P 27 A1A6P H11 H11 H 0 1 N N N N N N 14.974 -1.070 6.030 -1.054 3.321 -0.145 H11 A1A6P 28 A1A6P H14 H12 H 0 1 N N N N N N 15.900 3.490 6.958 -4.645 -0.013 -0.021 H14 A1A6P 29 A1A6P H3 H13 H 0 1 N N N N N N 10.795 -0.748 2.555 0.188 0.987 -2.677 H3 A1A6P 30 A1A6P H8 H14 H 0 1 N N N N N N 11.412 2.466 0.225 4.653 0.818 1.492 H8 A1A6P 31 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1A6P C3 C4 SING N N 1 A1A6P C3 C2 SING N N 2 A1A6P C4 O2 SING N N 3 A1A6P C4 C5 SING N N 4 A1A6P C5 N1 SING N N 5 A1A6P C2 C1 SING N N 6 A1A6P C2 N1 SING N N 7 A1A6P C1 O1 SING N N 8 A1A6P N1 C6 SING N N 9 A1A6P C6 C9 DOUB Y N 10 A1A6P C6 N2 SING Y N 11 A1A6P C10 C9 SING Y N 12 A1A6P C10 C11 DOUB Y N 13 A1A6P C9 C8 SING Y N 14 A1A6P N2 C7 DOUB Y N 15 A1A6P C11 N4 SING Y N 16 A1A6P C8 N4 SING Y N 17 A1A6P C8 N3 DOUB Y N 18 A1A6P C7 N3 SING Y N 19 A1A6P C3 H7 SING N N 20 A1A6P C3 H6 SING N N 21 A1A6P C1 H5 SING N N 22 A1A6P C1 H4 SING N N 23 A1A6P C10 H12 SING N N 24 A1A6P C11 H13 SING N N 25 A1A6P C2 H1 SING N N 26 A1A6P C4 H2 SING N N 27 A1A6P C5 H9 SING N N 28 A1A6P C5 H10 SING N N 29 A1A6P C7 H11 SING N N 30 A1A6P N4 H14 SING N N 31 A1A6P O1 H3 SING N N 32 A1A6P O2 H8 SING N N 33 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1A6P SMILES ACDLabs 14.52 "OCC1CC(O)CN1c1ncnc2[NH]ccc12" A1A6P InChI InChI 1.06 "InChI=1S/C11H14N4O2/c16-5-7-3-8(17)4-15(7)11-9-1-2-12-10(9)13-6-14-11/h1-2,6-8,16-17H,3-5H2,(H,12,13,14)/t7-,8-/m1/s1" A1A6P InChIKey InChI 1.06 XHMIZBMJEPIERJ-HTQZYQBOSA-N A1A6P SMILES_CANONICAL CACTVS 3.385 "OC[C@H]1C[C@@H](O)CN1c2ncnc3[nH]ccc23" A1A6P SMILES CACTVS 3.385 "OC[CH]1C[CH](O)CN1c2ncnc3[nH]ccc23" A1A6P SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1c[nH]c2c1c(ncn2)N3C[C@@H](C[C@@H]3CO)O" A1A6P SMILES "OpenEye OEToolkits" 3.1.0.0 "c1c[nH]c2c1c(ncn2)N3CC(CC3CO)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1A6P "SYSTEMATIC NAME" ACDLabs 14.52 "(3R,5R)-5-(hydroxymethyl)-1-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)pyrrolidin-3-ol" A1A6P "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(3~{R},5~{R})-5-(hydroxymethyl)-1-(7~{H}-pyrrolo[2,3-d]pyrimidin-4-yl)pyrrolidin-3-ol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1A6P "Create component" 2024-09-13 RCSB A1A6P "Initial release" 2025-06-11 RCSB #