data_A1A78 # _chem_comp.id A1A78 _chem_comp.name "[(2S,4R)-4-tert-butyl-1-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)piperidin-2-yl]methanol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H24 N4 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-09-18 _chem_comp.pdbx_modified_date 2025-06-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 288.388 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1A78 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7HDG _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1A78 N2 N1 N 0 1 Y N N N N N 15.029 -0.123 3.712 -1.665 1.414 1.027 N2 A1A78 1 A1A78 C3 C1 C 0 1 N N N N N N 10.826 2.343 -0.955 4.982 0.692 -0.911 C3 A1A78 2 A1A78 C6 C2 C 0 1 N N N N N N 13.896 2.209 -0.293 2.133 -0.679 1.290 C6 A1A78 3 A1A78 C9 C3 C 0 1 Y N N N N N 15.047 -0.128 5.078 -2.931 1.740 1.219 C9 A1A78 4 A1A78 C12 C4 C 0 1 Y N N N N N 15.620 3.652 3.610 -2.422 -1.927 -0.565 C12 A1A78 5 A1A78 C14 C5 C 0 1 N N S N N N 14.790 -0.326 0.904 0.645 0.870 -0.653 C14 A1A78 6 A1A78 C1 C6 C 0 1 N N N N N N 12.341 1.329 -2.636 4.144 -1.643 -0.612 C1 A1A78 7 A1A78 C10 C7 C 0 1 Y N N N N N 15.395 2.075 5.220 -3.696 -0.223 0.294 C10 A1A78 8 A1A78 C11 C8 C 0 1 Y N N N N N 15.396 2.247 3.805 -2.362 -0.611 0.068 C11 A1A78 9 A1A78 C13 C9 C 0 1 Y N N N N N 15.732 4.275 4.831 -3.722 -2.244 -0.681 C13 A1A78 10 A1A78 C15 C10 C 0 1 N N N N N N 16.046 -1.123 0.491 -0.159 0.962 -1.952 C15 A1A78 11 A1A78 C16 C11 C 0 1 N N N N N N 13.812 -0.167 -0.288 2.064 0.387 -0.965 C16 A1A78 12 A1A78 C2 C12 C 0 1 N N N N N N 11.772 1.152 -1.236 4.258 -0.264 0.040 C2 A1A78 13 A1A78 C4 C13 C 0 1 N N N N N N 10.910 -0.115 -1.244 5.049 -0.381 1.345 C4 A1A78 14 A1A78 C5 C14 C 0 1 N N R N N N 12.923 1.060 -0.175 2.859 0.277 0.339 C5 A1A78 15 A1A78 C7 C15 C 0 1 N N N N N N 14.942 2.196 0.808 0.713 -0.165 1.537 C7 A1A78 16 A1A78 C8 C16 C 0 1 Y N N N N N 15.196 1.038 3.040 -1.333 0.258 0.459 C8 A1A78 17 A1A78 N1 N2 N 0 1 N N N N N N 15.149 0.968 1.588 -0.006 -0.078 0.259 N1 A1A78 18 A1A78 N3 N3 N 0 1 Y N N N N N 15.222 0.911 5.899 -3.927 0.956 0.869 N3 A1A78 19 A1A78 N4 N4 N 0 1 Y N N N N N 15.597 3.307 5.825 -4.494 -1.232 -0.171 N4 A1A78 20 A1A78 O1 O1 O 0 1 N N N N N N 15.660 -2.462 0.469 -1.432 1.553 -1.683 O1 A1A78 21 A1A78 H8 H1 H 0 1 N N N N N N 10.398 2.242 0.053 4.419 0.775 -1.840 H8 A1A78 22 A1A78 H7 H2 H 0 1 N N N N N N 11.392 3.284 -1.021 5.063 1.674 -0.446 H7 A1A78 23 A1A78 H6 H3 H 0 1 N N N N N N 10.015 2.350 -1.698 5.979 0.307 -1.123 H6 A1A78 24 A1A78 H13 H4 H 0 1 N N N N N N 14.406 2.142 -1.266 2.088 -1.672 0.844 H13 A1A78 25 A1A78 H12 H5 H 0 1 N N N N N N 13.336 3.154 -0.237 2.672 -0.728 2.237 H12 A1A78 26 A1A78 H16 H6 H 0 1 N N N N N N 14.902 -1.088 5.551 -3.157 2.688 1.683 H16 A1A78 27 A1A78 H17 H7 H 0 1 N N N N N N 15.690 4.144 2.651 -1.582 -2.529 -0.879 H17 A1A78 28 A1A78 H2 H8 H 0 1 N N N N N N 14.266 -0.942 1.650 0.691 1.853 -0.184 H2 A1A78 29 A1A78 H3 H9 H 0 1 N N N N N N 12.967 2.233 -2.666 5.141 -2.028 -0.825 H3 A1A78 30 A1A78 H5 H10 H 0 1 N N N N N N 12.951 0.452 -2.897 3.629 -2.324 0.065 H5 A1A78 31 A1A78 H4 H11 H 0 1 N N N N N N 11.516 1.430 -3.357 3.581 -1.560 -1.542 H4 A1A78 32 A1A78 H18 H12 H 0 1 N N N N N N 15.896 5.330 4.992 -4.102 -3.159 -1.111 H18 A1A78 33 A1A78 H21 H13 H 0 1 N N N N N N 16.854 -0.970 1.222 0.382 1.576 -2.671 H21 A1A78 34 A1A78 H20 H14 H 0 1 N N N N N N 16.389 -0.807 -0.505 -0.302 -0.038 -2.362 H20 A1A78 35 A1A78 H23 H15 H 0 1 N N N N N N 13.171 -1.060 -0.335 2.018 -0.590 -1.447 H23 A1A78 36 A1A78 H24 H16 H 0 1 N N N N N N 14.400 -0.088 -1.214 2.552 1.099 -1.630 H24 A1A78 37 A1A78 H9 H17 H 0 1 N N N N N N 10.481 -0.274 -0.243 6.046 -0.766 1.132 H9 A1A78 38 A1A78 H10 H18 H 0 1 N N N N N N 10.098 -0.001 -1.977 5.130 0.602 1.810 H10 A1A78 39 A1A78 H11 H19 H 0 1 N N N N N N 11.532 -0.980 -1.518 4.533 -1.061 2.022 H11 A1A78 40 A1A78 H1 H20 H 0 1 N N N N N N 12.469 1.078 0.827 2.938 1.261 0.801 H1 A1A78 41 A1A78 H14 H21 H 0 1 N N N N N N 15.905 2.444 0.339 0.189 -0.851 2.203 H14 A1A78 42 A1A78 H15 H22 H 0 1 N N N N N N 14.667 2.987 1.521 0.759 0.823 1.996 H15 A1A78 43 A1A78 H19 H23 H 0 1 N N N N N N 15.639 3.473 6.810 -5.464 -1.232 -0.143 H19 A1A78 44 A1A78 H22 H24 H 0 1 N N N N N N 16.401 -3.002 0.219 -1.996 1.643 -2.463 H22 A1A78 45 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1A78 C1 C2 SING N N 1 A1A78 C4 C2 SING N N 2 A1A78 C2 C3 SING N N 3 A1A78 C2 C5 SING N N 4 A1A78 C6 C5 SING N N 5 A1A78 C6 C7 SING N N 6 A1A78 C16 C5 SING N N 7 A1A78 C16 C14 SING N N 8 A1A78 O1 C15 SING N N 9 A1A78 C15 C14 SING N N 10 A1A78 C7 N1 SING N N 11 A1A78 C14 N1 SING N N 12 A1A78 N1 C8 SING N N 13 A1A78 C8 N2 DOUB Y N 14 A1A78 C8 C11 SING Y N 15 A1A78 C12 C11 SING Y N 16 A1A78 C12 C13 DOUB Y N 17 A1A78 N2 C9 SING Y N 18 A1A78 C11 C10 DOUB Y N 19 A1A78 C13 N4 SING Y N 20 A1A78 C9 N3 DOUB Y N 21 A1A78 C10 N4 SING Y N 22 A1A78 C10 N3 SING Y N 23 A1A78 C3 H8 SING N N 24 A1A78 C3 H7 SING N N 25 A1A78 C3 H6 SING N N 26 A1A78 C6 H13 SING N N 27 A1A78 C6 H12 SING N N 28 A1A78 C9 H16 SING N N 29 A1A78 C12 H17 SING N N 30 A1A78 C14 H2 SING N N 31 A1A78 C1 H3 SING N N 32 A1A78 C1 H5 SING N N 33 A1A78 C1 H4 SING N N 34 A1A78 C13 H18 SING N N 35 A1A78 C15 H21 SING N N 36 A1A78 C15 H20 SING N N 37 A1A78 C16 H23 SING N N 38 A1A78 C16 H24 SING N N 39 A1A78 C4 H9 SING N N 40 A1A78 C4 H10 SING N N 41 A1A78 C4 H11 SING N N 42 A1A78 C5 H1 SING N N 43 A1A78 C7 H14 SING N N 44 A1A78 C7 H15 SING N N 45 A1A78 N4 H19 SING N N 46 A1A78 O1 H22 SING N N 47 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1A78 SMILES ACDLabs 14.52 "CC(C)(C)C1CC(CO)N(CC1)c1ncnc2[NH]ccc12" A1A78 InChI InChI 1.06 "InChI=1S/C16H24N4O/c1-16(2,3)11-5-7-20(12(8-11)9-21)15-13-4-6-17-14(13)18-10-19-15/h4,6,10-12,21H,5,7-9H2,1-3H3,(H,17,18,19)/t11-,12+/m1/s1" A1A78 InChIKey InChI 1.06 RDCYKOUDKWSIAX-NEPJUHHUSA-N A1A78 SMILES_CANONICAL CACTVS 3.385 "CC(C)(C)[C@@H]1CCN([C@H](CO)C1)c2ncnc3[nH]ccc23" A1A78 SMILES CACTVS 3.385 "CC(C)(C)[CH]1CCN([CH](CO)C1)c2ncnc3[nH]ccc23" A1A78 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CC(C)(C)[C@@H]1CCN([C@@H](C1)CO)c2c3cc[nH]c3ncn2" A1A78 SMILES "OpenEye OEToolkits" 3.1.0.0 "CC(C)(C)C1CCN(C(C1)CO)c2c3cc[nH]c3ncn2" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1A78 "SYSTEMATIC NAME" ACDLabs 14.52 "[(2S,4R)-4-tert-butyl-1-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)piperidin-2-yl]methanol" A1A78 "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "[(2~{S},4~{R})-4-~{tert}-butyl-1-(7~{H}-pyrrolo[2,3-d]pyrimidin-4-yl)piperidin-2-yl]methanol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1A78 "Create component" 2024-09-18 RCSB A1A78 "Initial release" 2025-06-11 RCSB #