data_A1A7J # _chem_comp.id A1A7J _chem_comp.name "4-{[(5S)-2-oxo-5-(thiophen-2-yl)pyrrolidin-1-yl]amino}-7H-pyrrolo[2,3-d]pyrimidine-5-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C15 H14 N6 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-09-17 _chem_comp.pdbx_modified_date 2025-08-15 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 342.376 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1A7J _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7HHX _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1A7J N2 N1 N 0 1 Y N N N N N -48.101 -28.726 6.624 -3.724 -0.832 -0.866 N2 A1A7J 1 A1A7J C3 C1 C 0 1 Y N N N N N -49.021 -28.631 5.581 -3.767 0.130 0.091 C3 A1A7J 2 A1A7J C6 C2 C 0 1 Y N N N N N -45.824 -29.560 3.996 -0.370 -1.218 0.241 C6 A1A7J 3 A1A7J C9 C3 C 0 1 N N N N N N -42.799 -29.649 0.468 3.826 0.429 -0.006 C9 A1A7J 4 A1A7J C12 C4 C 0 1 Y N N N N N -43.977 -26.458 0.615 1.467 2.873 -0.450 C12 A1A7J 5 A1A7J C14 C5 C 0 1 Y N N N N N -45.946 -26.186 -0.573 0.144 2.383 -2.257 C14 A1A7J 6 A1A7J C1 C6 C 0 1 N N N N N N -49.018 -28.915 3.073 -2.185 1.125 1.804 C1 A1A7J 7 A1A7J C10 C7 C 0 1 N N S N N N -43.749 -28.849 1.389 2.455 0.802 0.600 C10 A1A7J 8 A1A7J C11 C8 C 0 1 Y N N N N N -44.464 -27.736 0.677 1.623 1.549 -0.411 C11 A1A7J 9 A1A7J C13 C9 C 0 1 Y N N N N N -44.839 -25.561 -0.115 0.650 3.333 -1.469 C13 A1A7J 10 A1A7J C15 C10 C 0 1 Y N N N N N -47.010 -29.202 4.674 -1.694 -0.796 0.075 C15 A1A7J 11 A1A7J C2 C11 C 0 1 Y N N N N N -48.369 -28.923 4.377 -2.556 0.212 0.713 C2 A1A7J 12 A1A7J C4 C12 C 0 1 Y N N N N N -46.881 -29.069 6.065 -2.486 -1.420 -0.903 C4 A1A7J 13 A1A7J C5 C13 C 0 1 Y N N N N N -44.687 -29.581 6.031 -0.690 -2.749 -1.454 C5 A1A7J 14 A1A7J C7 C14 C 0 1 N N N N N N -44.049 -31.211 1.817 2.713 -1.476 0.974 C7 A1A7J 15 A1A7J C8 C15 C 0 1 N N N N N N -42.756 -31.062 1.050 4.092 -0.950 0.641 C8 A1A7J 16 A1A7J N1 N2 N 0 1 N N N N N N -50.395 -28.912 3.076 -3.120 1.912 2.371 N1 A1A7J 17 A1A7J N3 N3 N 0 1 Y N N N N N -45.735 -29.251 6.788 -1.942 -2.387 -1.639 N3 A1A7J 18 A1A7J N4 N4 N 0 1 Y N N N N N -44.656 -29.744 4.677 0.087 -2.188 -0.547 N4 A1A7J 19 A1A7J N5 N5 N 0 1 N N N N N N -45.768 -29.726 2.644 0.447 -0.632 1.192 N5 A1A7J 20 A1A7J N6 N6 N 0 1 N N N N N N -44.616 -29.936 1.982 1.816 -0.475 0.939 N6 A1A7J 21 A1A7J O1 O1 O 0 1 N N N N N N -48.410 -28.888 2.003 -1.034 1.170 2.195 O1 A1A7J 22 A1A7J O2 O2 O 0 1 N N N N N N -44.553 -32.241 2.229 2.454 -2.632 1.235 O2 A1A7J 23 A1A7J S1 S1 S 0 1 Y N N N N N -45.952 -27.832 -0.136 0.712 0.808 -1.721 S1 A1A7J 24 A1A7J H5 H1 H 0 1 N N N N N N -48.287 -28.575 7.595 -4.468 -1.074 -1.440 H5 A1A7J 25 A1A7J H4 H2 H 0 1 N N N N N N -50.065 -28.374 5.685 -4.628 0.738 0.324 H4 A1A7J 26 A1A7J H11 H3 H 0 1 N N N N N N -41.794 -29.202 0.471 3.763 0.345 -1.091 H11 A1A7J 27 A1A7J H10 H4 H 0 1 N N N N N N -43.188 -29.669 -0.561 4.590 1.150 0.285 H10 A1A7J 28 A1A7J H12 H5 H 0 1 N N N N N N -43.044 -26.153 1.066 1.937 3.535 0.262 H12 A1A7J 29 A1A7J H14 H6 H 0 1 N N N N N N -46.726 -25.704 -1.143 -0.509 2.556 -3.099 H14 A1A7J 30 A1A7J H1 H7 H 0 1 N N N N N N -43.145 -28.411 2.197 2.590 1.405 1.497 H1 A1A7J 31 A1A7J H13 H8 H 0 1 N N N N N N -44.625 -24.515 -0.276 0.435 4.382 -1.612 H13 A1A7J 32 A1A7J H6 H9 H 0 1 N N N N N N -43.754 -29.737 6.551 -0.282 -3.537 -2.070 H6 A1A7J 33 A1A7J H9 H10 H 0 1 N N N N N N -42.696 -31.810 0.245 4.592 -1.613 -0.065 H9 A1A7J 34 A1A7J H8 H11 H 0 1 N N N N N N -41.893 -31.177 1.722 4.687 -0.838 1.548 H8 A1A7J 35 A1A7J H2 H12 H 0 1 N N N N N N -50.897 -28.888 2.211 -4.038 1.877 2.059 H2 A1A7J 36 A1A7J H3 H13 H 0 1 N N N N N N -50.893 -28.934 3.943 -2.876 2.515 3.090 H3 A1A7J 37 A1A7J H7 H14 H 0 1 N N N N N N -46.168 -28.900 2.247 0.072 -0.329 2.034 H7 A1A7J 38 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1A7J C14 S1 SING Y N 1 A1A7J C14 C13 DOUB Y N 2 A1A7J S1 C11 SING Y N 3 A1A7J C13 C12 SING Y N 4 A1A7J C9 C8 SING N N 5 A1A7J C9 C10 SING N N 6 A1A7J C12 C11 DOUB Y N 7 A1A7J C11 C10 SING N N 8 A1A7J C8 C7 SING N N 9 A1A7J C10 N6 SING N N 10 A1A7J C7 N6 SING N N 11 A1A7J C7 O2 DOUB N N 12 A1A7J N6 N5 SING N N 13 A1A7J O1 C1 DOUB N N 14 A1A7J N5 C6 SING N N 15 A1A7J C1 N1 SING N N 16 A1A7J C1 C2 SING N N 17 A1A7J C6 C15 DOUB Y N 18 A1A7J C6 N4 SING Y N 19 A1A7J C2 C15 SING Y N 20 A1A7J C2 C3 DOUB Y N 21 A1A7J C15 C4 SING Y N 22 A1A7J N4 C5 DOUB Y N 23 A1A7J C3 N2 SING Y N 24 A1A7J C5 N3 SING Y N 25 A1A7J C4 N2 SING Y N 26 A1A7J C4 N3 DOUB Y N 27 A1A7J N2 H5 SING N N 28 A1A7J C3 H4 SING N N 29 A1A7J C9 H11 SING N N 30 A1A7J C9 H10 SING N N 31 A1A7J C12 H12 SING N N 32 A1A7J C14 H14 SING N N 33 A1A7J C10 H1 SING N N 34 A1A7J C13 H13 SING N N 35 A1A7J C5 H6 SING N N 36 A1A7J C8 H9 SING N N 37 A1A7J C8 H8 SING N N 38 A1A7J N1 H2 SING N N 39 A1A7J N1 H3 SING N N 40 A1A7J N5 H7 SING N N 41 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1A7J SMILES ACDLabs 14.52 "NC(=O)c1c[NH]c2ncnc(NN3C(=O)CCC3c3cccs3)c12" A1A7J InChI InChI 1.06 "InChI=1S/C15H14N6O2S/c16-13(23)8-6-17-14-12(8)15(19-7-18-14)20-21-9(3-4-11(21)22)10-2-1-5-24-10/h1-2,5-7,9H,3-4H2,(H2,16,23)(H2,17,18,19,20)/t9-/m0/s1" A1A7J InChIKey InChI 1.06 CNDROIJWJIVCCB-VIFPVBQESA-N A1A7J SMILES_CANONICAL CACTVS 3.385 "NC(=O)c1c[nH]c2ncnc(NN3[C@@H](CCC3=O)c4sccc4)c12" A1A7J SMILES CACTVS 3.385 "NC(=O)c1c[nH]c2ncnc(NN3[CH](CCC3=O)c4sccc4)c12" A1A7J SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1cc(sc1)[C@@H]2CCC(=O)N2Nc3c4c(c[nH]c4ncn3)C(=O)N" A1A7J SMILES "OpenEye OEToolkits" 3.1.0.0 "c1cc(sc1)C2CCC(=O)N2Nc3c4c(c[nH]c4ncn3)C(=O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1A7J "SYSTEMATIC NAME" ACDLabs 14.52 "4-{[(5S)-2-oxo-5-(thiophen-2-yl)pyrrolidin-1-yl]amino}-7H-pyrrolo[2,3-d]pyrimidine-5-carboxamide" A1A7J "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "4-[[(5~{S})-2-oxidanylidene-5-thiophen-2-yl-pyrrolidin-1-yl]amino]-7~{H}-pyrrolo[2,3-d]pyrimidine-5-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1A7J "Create component" 2024-09-17 RCSB A1A7J "Initial release" 2025-08-20 RCSB #