data_A1A82 # _chem_comp.id A1A82 _chem_comp.name "(1S,3S)-1-phenyl-3-[(7H-pyrrolo[2,3-d]pyrimidin-4-yl)amino]butane-1,4-diol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H18 N4 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-09-22 _chem_comp.pdbx_modified_date 2025-06-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 298.340 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1A82 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7HDT _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1A82 N2 N1 N 0 1 Y N N N N N 14.896 -0.268 3.831 -2.496 -1.301 -0.891 N2 A1A82 1 A1A82 C3 C1 C 0 1 N N N N N N 13.399 -0.117 0.043 1.527 -1.141 0.408 C3 A1A82 2 A1A82 C6 C2 C 0 1 Y N N N N N 10.296 0.036 -0.888 3.487 1.563 0.419 C6 A1A82 3 A1A82 C9 C3 C 0 1 Y N N N N N 9.669 2.722 -1.069 5.663 0.208 -0.617 C9 A1A82 4 A1A82 C12 C4 C 0 1 Y N N N N N 14.929 -0.174 5.194 -3.695 -1.237 -1.440 C12 A1A82 5 A1A82 C14 C5 C 0 1 Y N N N N N 15.370 2.118 3.782 -2.917 0.735 0.197 C14 A1A82 6 A1A82 C1 C6 C 0 1 N N N N N N 15.789 -0.987 0.097 -0.268 -2.713 1.151 C1 A1A82 7 A1A82 C10 C7 C 0 1 Y N N N N N 10.694 2.297 -0.227 4.382 -0.254 -0.858 C10 A1A82 8 A1A82 C11 C8 C 0 1 Y N N N N N 15.107 0.877 3.102 -2.065 -0.346 -0.072 C11 A1A82 9 A1A82 C13 C9 C 0 1 Y N N N N N 15.371 2.036 5.206 -4.186 0.762 -0.411 C13 A1A82 10 A1A82 C15 C10 C 0 1 Y N N N N N 15.650 3.498 3.493 -2.829 1.947 1.010 C15 A1A82 11 A1A82 C16 C11 C 0 1 Y N N N N N 15.801 4.184 4.688 -3.990 2.603 0.855 C16 A1A82 12 A1A82 C2 C12 C 0 1 N N S N N N 14.625 -0.439 0.979 0.068 -1.555 0.208 C2 A1A82 13 A1A82 C4 C13 C 0 1 N N S N N N 12.155 0.469 0.800 1.898 -0.069 -0.619 C4 A1A82 14 A1A82 C5 C14 C 0 1 Y N N N N N 11.030 0.946 -0.118 3.294 0.427 -0.346 C5 A1A82 15 A1A82 C7 C15 C 0 1 Y N N N N N 9.270 0.460 -1.729 4.767 2.021 0.665 C7 A1A82 16 A1A82 C8 C16 C 0 1 Y N N N N N 8.951 1.808 -1.826 5.855 1.344 0.147 C8 A1A82 17 A1A82 N1 N2 N 0 1 N N N N N N 15.068 0.780 1.714 -0.808 -0.417 0.502 N1 A1A82 18 A1A82 N3 N3 N 0 1 Y N N N N N 15.154 0.908 5.954 -4.527 -0.243 -1.217 N3 A1A82 19 A1A82 N4 N4 N 0 1 Y N N N N N 15.636 3.282 5.748 -4.811 1.904 0.008 N4 A1A82 20 A1A82 O1 O1 O 0 1 N N N N N N 15.382 -2.239 -0.369 0.039 -2.336 2.495 O1 A1A82 21 A1A82 O2 O2 O 0 1 N N N N N N 11.674 -0.561 1.617 1.840 -0.629 -1.933 O2 A1A82 22 A1A82 H7 H1 H 0 1 N N N N N N 13.093 -1.047 -0.458 1.656 -0.740 1.413 H7 A1A82 23 A1A82 H6 H2 H 0 1 N N N N N N 13.722 0.616 -0.711 2.172 -2.009 0.277 H6 A1A82 24 A1A82 H9 H3 H 0 1 N N N N N N 10.530 -1.017 -0.829 2.636 2.095 0.819 H9 A1A82 25 A1A82 H12 H4 H 0 1 N N N N N N 9.431 3.773 -1.133 6.513 -0.324 -1.018 H12 A1A82 26 A1A82 H15 H5 H 0 1 N N N N N N 14.750 -1.094 5.731 -4.006 -2.034 -2.100 H15 A1A82 27 A1A82 H5 H6 H 0 1 N N N N N N 16.706 -1.085 0.697 -1.329 -2.949 1.073 H5 A1A82 28 A1A82 H4 H7 H 0 1 N N N N N N 15.975 -0.309 -0.749 0.321 -3.588 0.876 H4 A1A82 29 A1A82 H13 H8 H 0 1 N N N N N N 11.240 3.027 0.353 4.232 -1.146 -1.448 H13 A1A82 30 A1A82 H16 H9 H 0 1 N N N N N N 15.730 3.930 2.506 -1.991 2.255 1.618 H16 A1A82 31 A1A82 H17 H10 H 0 1 N N N N N N 16.011 5.239 4.786 -4.241 3.541 1.329 H17 A1A82 32 A1A82 H1 H11 H 0 1 N N N N N N 14.325 -1.217 1.696 -0.082 -1.872 -0.824 H1 A1A82 33 A1A82 H2 H12 H 0 1 N N N N N N 12.494 1.318 1.411 1.196 0.762 -0.547 H2 A1A82 34 A1A82 H10 H13 H 0 1 N N N N N N 8.719 -0.265 -2.310 4.918 2.908 1.262 H10 A1A82 35 A1A82 H11 H14 H 0 1 N N N N N N 8.158 2.139 -2.480 6.856 1.702 0.340 H11 A1A82 36 A1A82 H14 H15 H 0 1 N N N N N N 16.001 0.961 1.403 -0.506 0.286 1.097 H14 A1A82 37 A1A82 H18 H16 H 0 1 N N N N N N 15.699 3.500 6.722 -5.702 2.179 -0.256 H18 A1A82 38 A1A82 H3 H17 H 0 1 N N N N N N 16.065 -2.612 -0.914 -0.149 -3.023 3.149 H3 A1A82 39 A1A82 H8 H18 H 0 1 N N N N N N 12.369 -0.862 2.190 2.440 -1.375 -2.069 H8 A1A82 40 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1A82 C8 C7 DOUB Y N 1 A1A82 C8 C9 SING Y N 2 A1A82 C7 C6 SING Y N 3 A1A82 C9 C10 DOUB Y N 4 A1A82 C6 C5 DOUB Y N 5 A1A82 O1 C1 SING N N 6 A1A82 C10 C5 SING Y N 7 A1A82 C5 C4 SING N N 8 A1A82 C3 C4 SING N N 9 A1A82 C3 C2 SING N N 10 A1A82 C1 C2 SING N N 11 A1A82 C4 O2 SING N N 12 A1A82 C2 N1 SING N N 13 A1A82 N1 C11 SING N N 14 A1A82 C11 C14 DOUB Y N 15 A1A82 C11 N2 SING Y N 16 A1A82 C15 C14 SING Y N 17 A1A82 C15 C16 DOUB Y N 18 A1A82 C14 C13 SING Y N 19 A1A82 N2 C12 DOUB Y N 20 A1A82 C16 N4 SING Y N 21 A1A82 C12 N3 SING Y N 22 A1A82 C13 N4 SING Y N 23 A1A82 C13 N3 DOUB Y N 24 A1A82 C3 H7 SING N N 25 A1A82 C3 H6 SING N N 26 A1A82 C6 H9 SING N N 27 A1A82 C9 H12 SING N N 28 A1A82 C12 H15 SING N N 29 A1A82 C1 H5 SING N N 30 A1A82 C1 H4 SING N N 31 A1A82 C10 H13 SING N N 32 A1A82 C15 H16 SING N N 33 A1A82 C16 H17 SING N N 34 A1A82 C2 H1 SING N N 35 A1A82 C4 H2 SING N N 36 A1A82 C7 H10 SING N N 37 A1A82 C8 H11 SING N N 38 A1A82 N1 H14 SING N N 39 A1A82 N4 H18 SING N N 40 A1A82 O1 H3 SING N N 41 A1A82 O2 H8 SING N N 42 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1A82 SMILES ACDLabs 14.52 "OC(CC(CO)Nc1ncnc2[NH]ccc21)c1ccccc1" A1A82 InChI InChI 1.06 "InChI=1S/C16H18N4O2/c21-9-12(8-14(22)11-4-2-1-3-5-11)20-16-13-6-7-17-15(13)18-10-19-16/h1-7,10,12,14,21-22H,8-9H2,(H2,17,18,19,20)/t12-,14-/m0/s1" A1A82 InChIKey InChI 1.06 RITDKQUOXVXQQV-JSGCOSHPSA-N A1A82 SMILES_CANONICAL CACTVS 3.385 "OC[C@H](C[C@H](O)c1ccccc1)Nc2ncnc3[nH]ccc23" A1A82 SMILES CACTVS 3.385 "OC[CH](C[CH](O)c1ccccc1)Nc2ncnc3[nH]ccc23" A1A82 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1ccc(cc1)[C@H](C[C@@H](CO)Nc2c3cc[nH]c3ncn2)O" A1A82 SMILES "OpenEye OEToolkits" 3.1.0.0 "c1ccc(cc1)C(CC(CO)Nc2c3cc[nH]c3ncn2)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1A82 "SYSTEMATIC NAME" ACDLabs 14.52 "(1S,3S)-1-phenyl-3-[(7H-pyrrolo[2,3-d]pyrimidin-4-yl)amino]butane-1,4-diol" A1A82 "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(1~{S},3~{S})-1-phenyl-3-(7~{H}-pyrrolo[2,3-d]pyrimidin-4-ylamino)butane-1,4-diol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1A82 "Create component" 2024-09-22 RCSB A1A82 "Initial release" 2025-06-11 RCSB #