data_A1A84 # _chem_comp.id A1A84 _chem_comp.name "(2S)-2-[(7H-pyrrolo[2,3-d]pyrimidin-4-yl)amino]pent-4-yn-1-ol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C11 H12 N4 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-09-22 _chem_comp.pdbx_modified_date 2025-06-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 216.239 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1A84 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7HDV _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1A84 N2 N1 N 0 1 Y N N N N N 14.844 -0.061 3.788 -0.412 -1.161 -1.149 N2 A1A84 1 A1A84 C3 C1 C 0 1 N N N N N N 13.524 0.175 -0.182 3.294 0.504 0.023 C3 A1A84 2 A1A84 C6 C2 C 0 1 Y N N N N N 15.075 1.106 3.085 -0.331 -0.252 -0.182 C6 A1A84 3 A1A84 C9 C3 C 0 1 Y N N N N N 15.348 2.307 3.823 -1.522 0.306 0.309 C9 A1A84 4 A1A84 C1 C4 C 0 1 N N N N N N 11.789 2.079 0.481 2.912 2.701 -1.402 C1 A1A84 5 A1A84 C10 C5 C 0 1 Y N N N N N 15.649 3.707 3.584 -1.857 1.298 1.328 C10 A1A84 6 A1A84 C11 C6 C 0 1 Y N N N N N 15.809 4.340 4.802 -3.195 1.409 1.337 C11 A1A84 7 A1A84 C2 C7 C 0 1 N N N N N N 12.565 1.223 0.189 3.081 1.726 -0.770 C2 A1A84 8 A1A84 C4 C8 C 0 1 N N S N N N 14.596 -0.162 0.918 2.127 -0.459 -0.201 C4 A1A84 9 A1A84 C5 C9 C 0 1 N N N N N N 15.853 -0.842 0.230 2.408 -1.777 0.524 C5 A1A84 10 A1A84 C7 C10 C 0 1 Y N N N N N 14.877 -0.059 5.163 -1.582 -1.534 -1.637 C7 A1A84 11 A1A84 C8 C11 C 0 1 Y N N N N N 15.349 2.146 5.237 -2.744 -0.122 -0.240 C8 A1A84 12 A1A84 N1 N2 N 0 1 N N N N N N 15.023 1.050 1.690 0.896 0.135 0.326 N1 A1A84 13 A1A84 N3 N3 N 0 1 Y N N N N N 15.117 0.992 5.955 -2.722 -1.038 -1.207 N3 A1A84 14 A1A84 N4 N4 N 0 1 Y N N N N N 15.633 3.377 5.803 -3.737 0.565 0.403 N4 A1A84 15 A1A84 O1 O1 O 0 1 N N N N N N 15.469 -2.066 -0.330 2.674 -1.515 1.903 O1 A1A84 16 A1A84 H4 H1 H 0 1 N N N N N N 12.959 -0.743 -0.401 4.224 0.027 -0.287 H4 A1A84 17 A1A84 H3 H2 H 0 1 N N N N N N 14.055 0.503 -1.088 3.354 0.763 1.080 H3 A1A84 18 A1A84 H2 H3 H 0 1 N N N N N N 11.099 2.840 0.741 2.760 3.572 -1.968 H2 A1A84 19 A1A84 H10 H4 H 0 1 N N N N N N 15.734 4.176 2.615 -1.162 1.838 1.954 H10 A1A84 20 A1A84 H11 H5 H 0 1 N N N N N N 16.029 5.386 4.954 -3.760 2.065 1.983 H11 A1A84 21 A1A84 H1 H6 H 0 1 N N N N N N 14.154 -0.892 1.613 2.012 -0.648 -1.268 H1 A1A84 22 A1A84 H5 H7 H 0 1 N N N N N N 16.637 -1.012 0.983 1.539 -2.430 0.439 H5 A1A84 23 A1A84 H6 H8 H 0 1 N N N N N N 16.241 -0.182 -0.560 3.273 -2.263 0.072 H6 A1A84 24 A1A84 H9 H9 H 0 1 N N N N N N 14.690 -1.003 5.654 -1.603 -2.276 -2.421 H9 A1A84 25 A1A84 H8 H10 H 0 1 N N N N N N 15.948 1.261 1.375 0.941 0.800 1.031 H8 A1A84 26 A1A84 H12 H11 H 0 1 N N N N N N 15.702 3.553 6.785 -4.686 0.468 0.224 H12 A1A84 27 A1A84 H7 H12 H 0 1 N N N N N N 16.220 -2.475 -0.743 2.861 -2.308 2.425 H7 A1A84 28 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1A84 O1 C5 SING N N 1 A1A84 C3 C2 SING N N 2 A1A84 C3 C4 SING N N 3 A1A84 C2 C1 TRIP N N 4 A1A84 C5 C4 SING N N 5 A1A84 C4 N1 SING N N 6 A1A84 N1 C6 SING N N 7 A1A84 C6 N2 DOUB Y N 8 A1A84 C6 C9 SING Y N 9 A1A84 C10 C9 SING Y N 10 A1A84 C10 C11 DOUB Y N 11 A1A84 N2 C7 SING Y N 12 A1A84 C9 C8 DOUB Y N 13 A1A84 C11 N4 SING Y N 14 A1A84 C7 N3 DOUB Y N 15 A1A84 C8 N4 SING Y N 16 A1A84 C8 N3 SING Y N 17 A1A84 C3 H4 SING N N 18 A1A84 C3 H3 SING N N 19 A1A84 C1 H2 SING N N 20 A1A84 C10 H10 SING N N 21 A1A84 C11 H11 SING N N 22 A1A84 C4 H1 SING N N 23 A1A84 C5 H5 SING N N 24 A1A84 C5 H6 SING N N 25 A1A84 C7 H9 SING N N 26 A1A84 N1 H8 SING N N 27 A1A84 N4 H12 SING N N 28 A1A84 O1 H7 SING N N 29 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1A84 SMILES ACDLabs 14.52 "C#CCC(CO)Nc1ncnc2[NH]ccc21" A1A84 InChI InChI 1.06 "InChI=1S/C11H12N4O/c1-2-3-8(6-16)15-11-9-4-5-12-10(9)13-7-14-11/h1,4-5,7-8,16H,3,6H2,(H2,12,13,14,15)/t8-/m0/s1" A1A84 InChIKey InChI 1.06 AOIANZUADVNHSQ-QMMMGPOBSA-N A1A84 SMILES_CANONICAL CACTVS 3.385 "OC[C@H](CC#C)Nc1ncnc2[nH]ccc12" A1A84 SMILES CACTVS 3.385 "OC[CH](CC#C)Nc1ncnc2[nH]ccc12" A1A84 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "C#CC[C@@H](CO)Nc1c2cc[nH]c2ncn1" A1A84 SMILES "OpenEye OEToolkits" 3.1.0.0 "C#CCC(CO)Nc1c2cc[nH]c2ncn1" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1A84 "SYSTEMATIC NAME" ACDLabs 14.52 "(2S)-2-[(7H-pyrrolo[2,3-d]pyrimidin-4-yl)amino]pent-4-yn-1-ol" A1A84 "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(2~{S})-2-(7~{H}-pyrrolo[2,3-d]pyrimidin-4-ylamino)pent-4-yn-1-ol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1A84 "Create component" 2024-09-22 RCSB A1A84 "Initial release" 2025-06-11 RCSB #