data_A1A8N # _chem_comp.id A1A8N _chem_comp.name "(3S)-3-(1'-benzyl-6-oxo-6,8-dihydro-2H,7H-spiro[furo[2,3-e]isoindole-3,4'-piperidin]-7-yl)piperidine-2,6-dione" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H27 N3 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-09-20 _chem_comp.pdbx_modified_date 2025-05-09 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 445.510 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1A8N _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9DOM _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1A8N O3 O1 O 0 1 N N N N N N 17.527 7.311 40.080 5.782 3.556 0.000 O3 A1A8N 1 A1A8N C25 C1 C 0 1 N N N N N N 16.995 7.197 38.960 5.738 2.357 -0.172 C25 A1A8N 2 A1A8N N2 N1 N 0 1 N N N N N N 15.751 7.694 38.691 6.155 1.536 0.804 N2 A1A8N 3 A1A8N C C2 C 0 1 N N N N N N 15.192 7.667 37.482 6.145 0.201 0.678 C A1A8N 4 A1A8N O O2 O 0 1 N N N N N N 14.074 8.102 37.355 6.544 -0.485 1.594 O A1A8N 5 A1A8N C3 C3 C 0 1 N N N N N N 17.713 6.465 37.859 5.212 1.817 -1.476 C3 A1A8N 6 A1A8N C2 C4 C 0 1 N N N N N N 17.467 7.117 36.529 5.883 0.471 -1.771 C2 A1A8N 7 A1A8N C1 C5 C 0 1 N N S N N N 15.973 7.077 36.285 5.647 -0.463 -0.579 C1 A1A8N 8 A1A8N N N2 N 0 1 N N N N N N 15.619 7.805 35.054 4.214 -0.736 -0.448 N A1A8N 9 A1A8N C5 C6 C 0 1 N N N N N N 15.908 9.240 34.984 3.221 0.168 0.144 C5 A1A8N 10 A1A8N C6 C7 C 0 1 Y N N N N N 15.326 9.514 33.665 1.895 -0.545 0.054 C6 A1A8N 11 A1A8N C11 C8 C 0 1 Y N N N N N 15.279 10.764 32.912 0.611 -0.197 0.440 C11 A1A8N 12 A1A8N O2 O3 O 0 1 N N N N N N 15.770 12.024 33.206 0.153 0.942 1.032 O2 A1A8N 13 A1A8N C12 C9 C 0 1 N N N N N N 15.796 12.790 31.981 -1.137 0.690 1.618 C12 A1A8N 14 A1A8N C13 C10 C 0 1 N N N N N N 14.716 12.169 31.056 -1.684 -0.458 0.750 C13 A1A8N 15 A1A8N C10 C11 C 0 1 Y N N N N N 14.634 10.760 31.600 -0.425 -1.101 0.219 C10 A1A8N 16 A1A8N C9 C12 C 0 1 Y N N N N N 14.062 9.623 31.057 -0.185 -2.318 -0.384 C9 A1A8N 17 A1A8N C8 C13 C 0 1 Y N N N N N 14.083 8.406 31.743 1.093 -2.664 -0.773 C8 A1A8N 18 A1A8N C7 C14 C 0 1 Y N N N N N 14.709 8.364 32.989 2.147 -1.775 -0.554 C7 A1A8N 19 A1A8N C4 C15 C 0 1 N N N N N N 14.925 7.338 34.002 3.590 -1.855 -0.856 C4 A1A8N 20 A1A8N O1 O4 O 0 1 N N N N N N 14.541 6.104 33.825 4.136 -2.799 -1.393 O1 A1A8N 21 A1A8N C16 C16 C 0 1 N N N N N N 13.395 12.891 31.234 -2.480 -1.439 1.600 C16 A1A8N 22 A1A8N C17 C17 C 0 1 N N N N N N 13.397 14.329 30.721 -3.755 -0.757 2.106 C17 A1A8N 23 A1A8N N1 N3 N 0 1 N N N N N N 13.807 14.393 29.311 -4.544 -0.284 0.962 N1 A1A8N 24 A1A8N C15 C18 C 0 1 N N N N N N 15.103 13.720 29.158 -3.807 0.723 0.186 C15 A1A8N 25 A1A8N C14 C19 C 0 1 N N N N N N 15.049 12.235 29.586 -2.534 0.092 -0.388 C14 A1A8N 26 A1A8N C18 C20 C 0 1 N N N N N N 13.906 15.827 28.930 -5.845 0.237 1.399 C18 A1A8N 27 A1A8N C19 C21 C 0 1 Y N N N N N 14.117 15.918 27.429 -6.718 0.483 0.195 C19 A1A8N 28 A1A8N C24 C22 C 0 1 Y N N N N N 13.141 15.433 26.532 -7.540 -0.522 -0.279 C24 A1A8N 29 A1A8N C23 C23 C 0 1 Y N N N N N 13.342 15.504 25.139 -8.340 -0.297 -1.384 C23 A1A8N 30 A1A8N C22 C24 C 0 1 Y N N N N N 14.526 16.055 24.630 -8.319 0.933 -2.014 C22 A1A8N 31 A1A8N C21 C25 C 0 1 Y N N N N N 15.506 16.531 25.525 -7.497 1.938 -1.539 C21 A1A8N 32 A1A8N C20 C26 C 0 1 Y N N N N N 15.304 16.455 26.910 -6.701 1.715 -0.431 C20 A1A8N 33 A1A8N H1 H1 H 0 1 N N N N N N 15.232 8.100 39.443 6.475 1.924 1.633 H1 A1A8N 34 A1A8N H2 H2 H 0 1 N N N N N N 17.352 5.427 37.823 4.134 1.679 -1.405 H2 A1A8N 35 A1A8N H3 H3 H 0 1 N N N N N N 18.793 6.471 38.068 5.437 2.520 -2.279 H3 A1A8N 36 A1A8N H4 H4 H 0 1 N N N N N N 17.994 6.567 35.736 5.448 0.035 -2.670 H4 A1A8N 37 A1A8N H5 H5 H 0 1 N N N N N N 17.819 8.159 36.548 6.953 0.620 -1.917 H5 A1A8N 38 A1A8N H6 H6 H 0 1 N N N N N N 15.671 6.025 36.172 6.185 -1.398 -0.737 H6 A1A8N 39 A1A8N H7 H7 H 0 1 N N N N N N 16.988 9.447 35.012 3.470 0.366 1.187 H7 A1A8N 40 A1A8N H8 H8 H 0 1 N N N N N N 15.406 9.804 35.784 3.184 1.102 -0.416 H8 A1A8N 41 A1A8N H9 H9 H 0 1 N N N N N N 16.787 12.720 31.509 -1.034 0.374 2.657 H9 A1A8N 42 A1A8N H10 H10 H 0 1 N N N N N N 15.561 13.845 32.186 -1.773 1.571 1.546 H10 A1A8N 43 A1A8N H11 H11 H 0 1 N N N N N N 13.591 9.677 30.086 -1.001 -3.004 -0.551 H11 A1A8N 44 A1A8N H12 H12 H 0 1 N N N N N N 13.627 7.523 31.321 1.277 -3.618 -1.245 H12 A1A8N 45 A1A8N H13 H13 H 0 1 N N N N N N 13.152 12.907 32.307 -2.747 -2.308 0.998 H13 A1A8N 46 A1A8N H14 H14 H 0 1 N N N N N N 12.619 12.331 30.691 -1.876 -1.757 2.450 H14 A1A8N 47 A1A8N H15 H15 H 0 1 N N N N N N 14.098 14.924 31.325 -4.343 -1.470 2.684 H15 A1A8N 48 A1A8N H16 H16 H 0 1 N N N N N N 12.384 14.746 30.819 -3.487 0.090 2.738 H16 A1A8N 49 A1A8N H18 H18 H 0 1 N N N N N N 15.406 13.773 28.102 -4.434 1.083 -0.629 H18 A1A8N 50 A1A8N H19 H19 H 0 1 N N N N N N 15.847 14.240 29.779 -3.539 1.556 0.835 H19 A1A8N 51 A1A8N H20 H20 H 0 1 N N N N N N 14.275 11.710 29.007 -1.968 0.848 -0.932 H20 A1A8N 52 A1A8N H21 H21 H 0 1 N N N N N N 16.025 11.762 29.406 -2.804 -0.718 -1.065 H21 A1A8N 53 A1A8N H22 H22 H 0 1 N N N N N N 14.756 16.291 29.452 -6.326 -0.489 2.054 H22 A1A8N 54 A1A8N H23 H23 H 0 1 N N N N N N 12.977 16.348 29.206 -5.700 1.173 1.939 H23 A1A8N 55 A1A8N H24 H24 H 0 1 N N N N N N 12.229 15.002 26.918 -7.557 -1.484 0.213 H24 A1A8N 56 A1A8N H25 H25 H 0 1 N N N N N N 12.584 15.134 24.464 -8.982 -1.083 -1.755 H25 A1A8N 57 A1A8N H26 H26 H 0 1 N N N N N N 14.686 16.114 23.564 -8.943 1.109 -2.877 H26 A1A8N 58 A1A8N H27 H27 H 0 1 N N N N N N 16.420 16.958 25.140 -7.480 2.899 -2.032 H27 A1A8N 59 A1A8N H28 H28 H 0 1 N N N N N N 16.069 16.813 27.583 -6.059 2.500 -0.060 H28 A1A8N 60 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1A8N C22 C23 DOUB Y N 1 A1A8N C22 C21 SING Y N 2 A1A8N C23 C24 SING Y N 3 A1A8N C21 C20 DOUB Y N 4 A1A8N C24 C19 DOUB Y N 5 A1A8N C20 C19 SING Y N 6 A1A8N C19 C18 SING N N 7 A1A8N C18 N1 SING N N 8 A1A8N C15 N1 SING N N 9 A1A8N C15 C14 SING N N 10 A1A8N N1 C17 SING N N 11 A1A8N C14 C13 SING N N 12 A1A8N C17 C16 SING N N 13 A1A8N C13 C16 SING N N 14 A1A8N C13 C10 SING N N 15 A1A8N C13 C12 SING N N 16 A1A8N C9 C10 DOUB Y N 17 A1A8N C9 C8 SING Y N 18 A1A8N C10 C11 SING Y N 19 A1A8N C8 C7 DOUB Y N 20 A1A8N C12 O2 SING N N 21 A1A8N C11 O2 SING N N 22 A1A8N C11 C6 DOUB Y N 23 A1A8N C7 C6 SING Y N 24 A1A8N C7 C4 SING N N 25 A1A8N C6 C5 SING N N 26 A1A8N O1 C4 DOUB N N 27 A1A8N C4 N SING N N 28 A1A8N C5 N SING N N 29 A1A8N N C1 SING N N 30 A1A8N C1 C2 SING N N 31 A1A8N C1 C SING N N 32 A1A8N C2 C3 SING N N 33 A1A8N O C DOUB N N 34 A1A8N C N2 SING N N 35 A1A8N C3 C25 SING N N 36 A1A8N N2 C25 SING N N 37 A1A8N C25 O3 DOUB N N 38 A1A8N N2 H1 SING N N 39 A1A8N C3 H2 SING N N 40 A1A8N C3 H3 SING N N 41 A1A8N C2 H4 SING N N 42 A1A8N C2 H5 SING N N 43 A1A8N C1 H6 SING N N 44 A1A8N C5 H7 SING N N 45 A1A8N C5 H8 SING N N 46 A1A8N C12 H9 SING N N 47 A1A8N C12 H10 SING N N 48 A1A8N C9 H11 SING N N 49 A1A8N C8 H12 SING N N 50 A1A8N C16 H13 SING N N 51 A1A8N C16 H14 SING N N 52 A1A8N C17 H15 SING N N 53 A1A8N C17 H16 SING N N 54 A1A8N C15 H18 SING N N 55 A1A8N C15 H19 SING N N 56 A1A8N C14 H20 SING N N 57 A1A8N C14 H21 SING N N 58 A1A8N C18 H22 SING N N 59 A1A8N C18 H23 SING N N 60 A1A8N C24 H24 SING N N 61 A1A8N C23 H25 SING N N 62 A1A8N C22 H26 SING N N 63 A1A8N C21 H27 SING N N 64 A1A8N C20 H28 SING N N 65 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1A8N SMILES ACDLabs 14.52 "O=C1NC(=O)CCC1N1Cc2c3OCC4(CCN(CC4)Cc4ccccc4)c3ccc2C1=O" A1A8N InChI InChI 1.06 "InChI=1S/C26H27N3O4/c30-22-9-8-21(24(31)27-22)29-15-19-18(25(29)32)6-7-20-23(19)33-16-26(20)10-12-28(13-11-26)14-17-4-2-1-3-5-17/h1-7,21H,8-16H2,(H,27,30,31)/t21-/m0/s1" A1A8N InChIKey InChI 1.06 HZXUBAMXBADXJI-NRFANRHFSA-N A1A8N SMILES_CANONICAL CACTVS 3.385 "O=C1CC[C@H](N2Cc3c4OCC5(CCN(CC5)Cc6ccccc6)c4ccc3C2=O)C(=O)N1" A1A8N SMILES CACTVS 3.385 "O=C1CC[CH](N2Cc3c4OCC5(CCN(CC5)Cc6ccccc6)c4ccc3C2=O)C(=O)N1" A1A8N SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)CN2CCC3(CC2)COc4c3ccc5c4CN(C5=O)[C@H]6CCC(=O)NC6=O" A1A8N SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)CN2CCC3(CC2)COc4c3ccc5c4CN(C5=O)C6CCC(=O)NC6=O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1A8N "SYSTEMATIC NAME" ACDLabs 14.52 "(3S)-3-(1'-benzyl-6-oxo-6,8-dihydro-2H,7H-spiro[furo[2,3-e]isoindole-3,4'-piperidin]-7-yl)piperidine-2,6-dione" A1A8N "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(3~{S})-3-[6-oxidanylidene-1'-(phenylmethyl)spiro[2,8-dihydrofuro[2,3-e]isoindole-3,4'-piperidine]-7-yl]piperidine-2,6-dione" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1A8N "Create component" 2024-09-20 RCSB A1A8N "Initial release" 2025-05-14 RCSB #