data_A1A9E # _chem_comp.id A1A9E _chem_comp.name "[(2R,4R)-4-methoxy-1-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)pyrrolidin-2-yl]methanol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H16 N4 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-09-23 _chem_comp.pdbx_modified_date 2025-06-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 248.281 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1A9E _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7HE2 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1A9E N2 N1 N 0 1 Y N N N N N 14.842 -0.068 4.287 -0.383 1.501 0.063 N2 A1A9E 1 A1A9E C3 C1 C 0 1 N N N N N N 14.039 0.279 0.071 2.417 -0.972 -0.998 C3 A1A9E 2 A1A9E C6 C2 C 0 1 Y N N N N N 14.874 1.110 3.606 -0.509 0.213 0.365 C6 A1A9E 3 A1A9E C9 C3 C 0 1 Y N N N N N 15.168 2.318 4.298 -1.802 -0.324 0.467 C9 A1A9E 4 A1A9E C12 C4 C 0 1 N N N N N N 14.500 2.252 1.397 1.769 0.239 0.975 C12 A1A9E 5 A1A9E C1 C5 C 0 1 N N N N N N 11.596 1.709 -0.803 5.057 0.403 1.193 C1 A1A9E 6 A1A9E C10 C6 C 0 1 Y N N N N N 15.327 3.738 4.063 -2.356 -1.642 0.768 C10 A1A9E 7 A1A9E C11 C7 C 0 1 Y N N N N N 15.624 4.364 5.255 -3.693 -1.524 0.714 C11 A1A9E 8 A1A9E C2 C8 C 0 1 N N R N N N 13.777 1.784 0.133 2.993 -0.483 0.358 C2 A1A9E 9 A1A9E C4 C9 C 0 1 N N R N N N 14.182 -0.179 1.536 0.957 -1.329 -0.646 C4 A1A9E 10 A1A9E C5 C10 C 0 1 N N N N N N 12.896 -0.967 2.062 0.031 -0.920 -1.793 C5 A1A9E 11 A1A9E C7 C11 C 0 1 Y N N N N N 15.076 -0.037 5.633 -1.444 2.261 -0.138 C7 A1A9E 12 A1A9E C8 C12 C 0 1 Y N N N N N 15.393 2.173 5.690 -2.904 0.523 0.244 C8 A1A9E 13 A1A9E N1 N2 N 0 1 N N N N N N 14.605 1.054 2.261 0.605 -0.579 0.574 N1 A1A9E 14 A1A9E N3 N3 N 0 1 Y N N N N N 15.361 1.010 6.395 -2.674 1.802 -0.053 N3 A1A9E 15 A1A9E N4 N4 N 0 1 Y N N N N N 15.659 3.399 6.273 -4.032 -0.233 0.402 N4 A1A9E 16 A1A9E O1 O1 O 0 1 N N N N N N 12.404 1.978 0.308 4.076 0.427 0.155 O1 A1A9E 17 A1A9E O2 O2 O 0 1 N N N N N N 11.836 -0.036 2.193 0.237 0.459 -2.104 O2 A1A9E 18 A1A9E H7 H1 H 0 1 N N N N N N 13.197 -0.238 -0.412 2.450 -0.175 -1.740 H7 A1A9E 19 A1A9E H6 H2 H 0 1 N N N N N N 14.964 0.073 -0.487 2.954 -1.852 -1.350 H6 A1A9E 20 A1A9E H16 H3 H 0 1 N N N N N N 15.501 2.635 1.148 1.855 0.269 2.062 H16 A1A9E 21 A1A9E H15 H4 H 0 1 N N N N N N 13.921 3.040 1.901 1.680 1.248 0.574 H15 A1A9E 22 A1A9E H4 H5 H 0 1 N N N N N N 10.543 1.897 -0.545 4.589 0.666 2.142 H4 A1A9E 23 A1A9E H5 H6 H 0 1 N N N N N N 11.891 2.362 -1.638 5.486 -0.597 1.265 H5 A1A9E 24 A1A9E H3 H7 H 0 1 N N N N N N 11.719 0.657 -1.099 5.845 1.121 0.965 H3 A1A9E 25 A1A9E H12 H8 H 0 1 N N N N N N 15.229 4.229 3.106 -1.797 -2.539 0.991 H12 A1A9E 26 A1A9E H13 H9 H 0 1 N N N N N N 15.800 5.422 5.384 -4.395 -2.325 0.891 H13 A1A9E 27 A1A9E H1 H10 H 0 1 N N N N N N 14.174 2.291 -0.759 3.303 -1.325 0.976 H1 A1A9E 28 A1A9E H2 H11 H 0 1 N N N N N N 15.020 -0.891 1.571 0.871 -2.400 -0.464 H2 A1A9E 29 A1A9E H8 H12 H 0 1 N N N N N N 12.618 -1.751 1.342 0.250 -1.528 -2.671 H8 A1A9E 30 A1A9E H9 H13 H 0 1 N N N N N N 13.113 -1.426 3.038 -1.007 -1.074 -1.495 H9 A1A9E 31 A1A9E H11 H14 H 0 1 N N N N N N 15.022 -0.988 6.142 -1.297 3.303 -0.382 H11 A1A9E 32 A1A9E H14 H15 H 0 1 N N N N N N 15.842 3.567 7.242 -4.940 0.096 0.306 H14 A1A9E 33 A1A9E H10 H16 H 0 1 N N N N N N 11.058 -0.483 2.505 -0.319 0.787 -2.824 H10 A1A9E 34 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1A9E C1 O1 SING N N 1 A1A9E C3 C2 SING N N 2 A1A9E C3 C4 SING N N 3 A1A9E C2 O1 SING N N 4 A1A9E C2 C12 SING N N 5 A1A9E C12 N1 SING N N 6 A1A9E C4 C5 SING N N 7 A1A9E C4 N1 SING N N 8 A1A9E C5 O2 SING N N 9 A1A9E N1 C6 SING N N 10 A1A9E C6 N2 DOUB Y N 11 A1A9E C6 C9 SING Y N 12 A1A9E C10 C9 SING Y N 13 A1A9E C10 C11 DOUB Y N 14 A1A9E N2 C7 SING Y N 15 A1A9E C9 C8 DOUB Y N 16 A1A9E C11 N4 SING Y N 17 A1A9E C7 N3 DOUB Y N 18 A1A9E C8 N4 SING Y N 19 A1A9E C8 N3 SING Y N 20 A1A9E C3 H7 SING N N 21 A1A9E C3 H6 SING N N 22 A1A9E C12 H16 SING N N 23 A1A9E C12 H15 SING N N 24 A1A9E C1 H4 SING N N 25 A1A9E C1 H5 SING N N 26 A1A9E C1 H3 SING N N 27 A1A9E C10 H12 SING N N 28 A1A9E C11 H13 SING N N 29 A1A9E C2 H1 SING N N 30 A1A9E C4 H2 SING N N 31 A1A9E C5 H8 SING N N 32 A1A9E C5 H9 SING N N 33 A1A9E C7 H11 SING N N 34 A1A9E N4 H14 SING N N 35 A1A9E O2 H10 SING N N 36 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1A9E SMILES ACDLabs 14.52 "OCC1CC(CN1c1ncnc2[NH]ccc12)OC" A1A9E InChI InChI 1.06 "InChI=1S/C12H16N4O2/c1-18-9-4-8(6-17)16(5-9)12-10-2-3-13-11(10)14-7-15-12/h2-3,7-9,17H,4-6H2,1H3,(H,13,14,15)/t8-,9-/m1/s1" A1A9E InChIKey InChI 1.06 HAQVFYLLVMIUKD-RKDXNWHRSA-N A1A9E SMILES_CANONICAL CACTVS 3.385 "CO[C@@H]1C[C@H](CO)N(C1)c2ncnc3[nH]ccc23" A1A9E SMILES CACTVS 3.385 "CO[CH]1C[CH](CO)N(C1)c2ncnc3[nH]ccc23" A1A9E SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CO[C@@H]1C[C@@H](N(C1)c2c3cc[nH]c3ncn2)CO" A1A9E SMILES "OpenEye OEToolkits" 3.1.0.0 "COC1CC(N(C1)c2c3cc[nH]c3ncn2)CO" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1A9E "SYSTEMATIC NAME" ACDLabs 14.52 "[(2R,4R)-4-methoxy-1-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)pyrrolidin-2-yl]methanol" A1A9E "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "[(2~{R},4~{R})-4-methoxy-1-(7~{H}-pyrrolo[2,3-d]pyrimidin-4-yl)pyrrolidin-2-yl]methanol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1A9E "Create component" 2024-09-23 RCSB A1A9E "Initial release" 2025-06-11 RCSB #