data_A1A9M # _chem_comp.id A1A9M _chem_comp.name "(1R)-1-[(2R)-1-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)pyrrolidin-2-yl]propan-1-ol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C13 H18 N4 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-09-23 _chem_comp.pdbx_modified_date 2025-06-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 246.308 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1A9M _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7HEA _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1A9M N2 N1 N 0 1 Y N N N N N 14.960 -0.168 3.972 -0.592 0.895 -1.393 N2 A1A9M 1 A1A9M C3 C1 C 0 1 N N R N N N 14.081 -1.284 1.009 2.784 0.572 -0.013 C3 A1A9M 2 A1A9M C6 C2 C 0 1 N N N N N N 15.022 1.603 -0.345 1.881 -2.543 -0.459 C6 A1A9M 3 A1A9M C9 C3 C 0 1 Y N N N N N 15.003 -0.152 5.321 -1.712 1.488 -1.764 C9 A1A9M 4 A1A9M C12 C4 C 0 1 Y N N N N N 15.300 3.654 3.824 -2.162 -1.021 1.459 C12 A1A9M 5 A1A9M C1 C5 C 0 1 N N N N N N 13.259 -3.427 -0.032 3.210 2.543 1.462 C1 A1A9M 6 A1A9M C10 C6 C 0 1 Y N N N N N 15.202 2.063 5.425 -2.939 0.461 -0.111 C10 A1A9M 7 A1A9M C11 C7 C 0 1 Y N N N N N 15.169 2.230 4.029 -1.771 -0.194 0.319 C11 A1A9M 8 A1A9M C13 C8 C 0 1 Y N N N N N 15.400 4.263 5.054 -3.478 -0.829 1.644 C13 A1A9M 9 A1A9M C2 C9 C 0 1 N N N N N N 14.466 -2.552 0.224 2.133 1.740 0.730 C2 A1A9M 10 A1A9M C4 C10 C 0 1 N N R N N N 15.307 -0.296 1.183 1.727 -0.156 -0.845 C4 A1A9M 11 A1A9M C5 C11 C 0 1 N N N N N N 15.708 0.252 -0.223 2.330 -1.440 -1.453 C5 A1A9M 12 A1A9M C7 C12 C 0 1 N N N N N N 14.954 2.119 1.071 0.475 -2.039 -0.047 C7 A1A9M 13 A1A9M C8 C13 C 0 1 Y N N N N N 15.035 1.019 3.299 -0.570 0.052 -0.365 C8 A1A9M 14 A1A9M N1 N2 N 0 1 N N N N N N 14.978 0.934 1.940 0.605 -0.568 0.019 N1 A1A9M 15 A1A9M N3 N3 N 0 1 Y N N N N N 15.122 0.901 6.111 -2.859 1.288 -1.152 N3 A1A9M 16 A1A9M N4 N4 N 0 1 Y N N N N N 15.341 3.291 6.066 -3.954 0.056 0.711 N4 A1A9M 17 A1A9M O1 O1 O 0 1 N N N N N N 13.585 -1.679 2.289 3.354 -0.335 0.933 O1 A1A9M 18 A1A9M H1 H1 H 0 1 N N N N N N 13.296 -0.754 0.450 3.566 0.951 -0.671 H1 A1A9M 19 A1A9M H11 H2 H 0 1 N N N N N N 15.611 2.282 -0.979 1.819 -3.512 -0.953 H11 A1A9M 20 A1A9M H12 H3 H 0 1 N N N N N N 14.012 1.490 -0.767 2.547 -2.587 0.403 H12 A1A9M 21 A1A9M H15 H4 H 0 1 N N N N N N 14.932 -1.111 5.812 -1.685 2.166 -2.605 H15 A1A9M 22 A1A9M H16 H5 H 0 1 N N N N N N 15.317 4.156 2.868 -1.517 -1.663 2.041 H16 A1A9M 23 A1A9M H4 H6 H 0 1 N N N N N N 13.567 -4.322 -0.593 3.721 1.898 2.177 H4 A1A9M 24 A1A9M H5 H7 H 0 1 N N N N N N 12.816 -3.730 0.928 3.930 2.928 0.740 H5 A1A9M 25 A1A9M H3 H8 H 0 1 N N N N N N 12.516 -2.865 -0.617 2.746 3.376 1.991 H3 A1A9M 26 A1A9M H17 H9 H 0 1 N N N N N N 15.507 5.325 5.216 -4.073 -1.300 2.413 H17 A1A9M 27 A1A9M H6 H10 H 0 1 N N N N N N 15.206 -3.123 0.805 1.621 2.386 0.015 H6 A1A9M 28 A1A9M H7 H11 H 0 1 N N N N N N 14.906 -2.257 -0.740 1.413 1.356 1.452 H7 A1A9M 29 A1A9M H2 H12 H 0 1 N N N N N N 16.155 -0.830 1.637 1.363 0.497 -1.637 H2 A1A9M 30 A1A9M H9 H13 H 0 1 N N N N N N 15.360 -0.428 -1.014 3.417 -1.374 -1.490 H9 A1A9M 31 A1A9M H10 H14 H 0 1 N N N N N N 16.800 0.368 -0.293 1.920 -1.625 -2.446 H10 A1A9M 32 A1A9M H14 H15 H 0 1 N N N N N N 15.818 2.765 1.283 -0.264 -2.321 -0.798 H14 A1A9M 33 A1A9M H13 H16 H 0 1 N N N N N N 14.025 2.687 1.226 0.198 -2.441 0.928 H13 A1A9M 34 A1A9M H18 H17 H 0 1 N N N N N N 15.389 3.450 7.052 -4.876 0.350 0.644 H18 A1A9M 35 A1A9M H8 H18 H 0 1 N N N N N N 13.342 -0.907 2.787 2.714 -0.712 1.552 H8 A1A9M 36 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1A9M C6 C5 SING N N 1 A1A9M C6 C7 SING N N 2 A1A9M C5 C4 SING N N 3 A1A9M C1 C2 SING N N 4 A1A9M C2 C3 SING N N 5 A1A9M C3 C4 SING N N 6 A1A9M C3 O1 SING N N 7 A1A9M C7 N1 SING N N 8 A1A9M C4 N1 SING N N 9 A1A9M N1 C8 SING N N 10 A1A9M C8 N2 DOUB Y N 11 A1A9M C8 C11 SING Y N 12 A1A9M C12 C11 SING Y N 13 A1A9M C12 C13 DOUB Y N 14 A1A9M N2 C9 SING Y N 15 A1A9M C11 C10 DOUB Y N 16 A1A9M C13 N4 SING Y N 17 A1A9M C9 N3 DOUB Y N 18 A1A9M C10 N4 SING Y N 19 A1A9M C10 N3 SING Y N 20 A1A9M C3 H1 SING N N 21 A1A9M C6 H11 SING N N 22 A1A9M C6 H12 SING N N 23 A1A9M C9 H15 SING N N 24 A1A9M C12 H16 SING N N 25 A1A9M C1 H4 SING N N 26 A1A9M C1 H5 SING N N 27 A1A9M C1 H3 SING N N 28 A1A9M C13 H17 SING N N 29 A1A9M C2 H6 SING N N 30 A1A9M C2 H7 SING N N 31 A1A9M C4 H2 SING N N 32 A1A9M C5 H9 SING N N 33 A1A9M C5 H10 SING N N 34 A1A9M C7 H14 SING N N 35 A1A9M C7 H13 SING N N 36 A1A9M N4 H18 SING N N 37 A1A9M O1 H8 SING N N 38 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1A9M SMILES ACDLabs 14.52 "CCC(O)C1CCCN1c1ncnc2[NH]ccc12" A1A9M InChI InChI 1.06 "InChI=1S/C13H18N4O/c1-2-11(18)10-4-3-7-17(10)13-9-5-6-14-12(9)15-8-16-13/h5-6,8,10-11,18H,2-4,7H2,1H3,(H,14,15,16)/t10-,11-/m1/s1" A1A9M InChIKey InChI 1.06 TZOYIYWBSDLREJ-GHMZBOCLSA-N A1A9M SMILES_CANONICAL CACTVS 3.385 "CC[C@@H](O)[C@H]1CCCN1c2ncnc3[nH]ccc23" A1A9M SMILES CACTVS 3.385 "CC[CH](O)[CH]1CCCN1c2ncnc3[nH]ccc23" A1A9M SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CC[C@H]([C@H]1CCCN1c2c3cc[nH]c3ncn2)O" A1A9M SMILES "OpenEye OEToolkits" 3.1.0.0 "CCC(C1CCCN1c2c3cc[nH]c3ncn2)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1A9M "SYSTEMATIC NAME" ACDLabs 14.52 "(1R)-1-[(2R)-1-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)pyrrolidin-2-yl]propan-1-ol" A1A9M "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(1~{R})-1-[(2~{R})-1-(7~{H}-pyrrolo[2,3-d]pyrimidin-4-yl)pyrrolidin-2-yl]propan-1-ol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1A9M "Create component" 2024-09-23 RCSB A1A9M "Initial release" 2025-06-11 RCSB #