data_A1AAL # _chem_comp.id A1AAL _chem_comp.name "(4bS)-1-ethyl-21-methyl-4b,11,12,22-tetrahydro-2H,10H,18H-dibenzo[13',14':6',7'][1,5,9]trioxacyclotetradecino[12',11':4,5]pyrido[2,3-d]pyrimidine-2,4,20(1H,3H)-trione" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H27 N3 O6" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2023-12-17 _chem_comp.pdbx_modified_date 2025-03-14 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 489.520 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1AAL _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8V92 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1AAL C10 C1 C 0 1 Y N N N N N 47.446 37.786 -4.001 0.027 2.529 -0.195 C10 A1AAL 1 A1AAL C13 C2 C 0 1 N N N N N N 47.416 35.213 -5.970 3.516 2.339 0.902 C13 A1AAL 2 A1AAL C17 C3 C 0 1 Y N N N N N 47.239 31.651 -3.483 6.194 -0.586 0.542 C17 A1AAL 3 A1AAL C20 C4 C 0 1 Y N N N N N 45.826 32.144 -1.138 4.547 -2.773 0.142 C20 A1AAL 4 A1AAL C21 C5 C 0 1 Y N N N N N 45.883 33.096 -2.137 4.174 -1.536 -0.346 C21 A1AAL 5 A1AAL C22 C6 C 0 1 N N N N N N 45.170 34.429 -1.992 2.880 -1.380 -1.105 C22 A1AAL 6 A1AAL C24 C7 C 0 1 N N N N N N 45.612 36.447 -0.888 0.974 -0.840 0.224 C24 A1AAL 7 A1AAL C26 C8 C 0 1 N N N N N N 48.957 38.360 -0.907 -2.606 0.034 0.658 C26 A1AAL 8 A1AAL C01 C9 C 0 1 N N N N N N 45.335 38.148 1.595 -0.242 -2.336 -2.001 C01 A1AAL 9 A1AAL C02 C10 C 0 1 N N N N N N 46.528 38.185 0.676 -0.996 -1.467 -1.029 C02 A1AAL 10 A1AAL C03 C11 C 0 1 N N N N N N 46.683 37.378 -0.508 -0.380 -0.697 -0.127 C03 A1AAL 11 A1AAL C04 C12 C 0 1 N N S N N N 47.817 37.548 -1.489 -1.150 0.415 0.544 C04 A1AAL 12 A1AAL C05 C13 C 0 1 Y N N N N N 47.273 38.296 -2.720 -1.068 1.686 -0.255 C05 A1AAL 13 A1AAL C06 C14 C 0 1 Y N N N N N 46.533 39.439 -2.539 -2.148 2.031 -1.056 C06 A1AAL 14 A1AAL C07 C15 C 0 1 Y N N N N N 46.007 40.122 -3.621 -2.148 3.216 -1.759 C07 A1AAL 15 A1AAL C08 C16 C 0 1 Y N N N N N 46.199 39.632 -4.890 -1.062 4.066 -1.686 C08 A1AAL 16 A1AAL C09 C17 C 0 1 Y N N N N N 46.908 38.473 -5.089 0.024 3.724 -0.909 C09 A1AAL 17 A1AAL C12 C18 C 0 1 N N N N N N 48.494 36.111 -5.388 2.389 2.290 -0.129 C12 A1AAL 18 A1AAL C14 C19 C 0 1 N N N N N N 47.421 33.827 -5.352 4.836 1.913 0.258 C14 A1AAL 19 A1AAL C16 C20 C 0 1 Y N N N N N 46.606 32.871 -3.284 4.995 -0.434 -0.136 C16 A1AAL 20 A1AAL C18 C21 C 0 1 Y N N N N N 47.181 30.700 -2.477 6.568 -1.829 1.018 C18 A1AAL 21 A1AAL C19 C22 C 0 1 Y N N N N N 46.469 30.936 -1.311 5.745 -2.921 0.819 C19 A1AAL 22 A1AAL C27 C23 C 0 1 N N N N N N 48.815 39.007 0.367 -3.159 -0.853 -0.221 C27 A1AAL 23 A1AAL C29 C24 C 0 1 N N N N N N 49.704 40.401 2.223 -5.132 -2.096 -1.041 C29 A1AAL 24 A1AAL C30 C25 C 0 1 N N N N N N 49.117 41.779 2.153 -5.054 -3.504 -0.448 C30 A1AAL 25 A1AAL C31 C26 C 0 1 N N N N N N 51.092 39.967 0.257 -5.255 -0.558 0.823 C31 A1AAL 26 A1AAL C33 C27 C 0 1 N N N N N N 50.226 38.481 -1.591 -3.407 0.595 1.664 C33 A1AAL 27 A1AAL N28 N1 N 0 1 N N N N N N 49.846 39.780 0.930 -4.497 -1.144 -0.125 N28 A1AAL 28 A1AAL N32 N2 N 0 1 N N N N N N 51.236 39.277 -1.002 -4.719 0.292 1.718 N32 A1AAL 29 A1AAL N36 N3 N 0 1 N N N N N N 47.604 38.950 1.111 -2.365 -1.462 -1.156 N36 A1AAL 30 A1AAL O11 O1 O 0 1 N N N N N N 48.152 36.609 -4.115 1.126 2.221 0.540 O11 A1AAL 31 A1AAL O15 O2 O 0 1 N N N N N N 46.611 33.895 -4.208 4.620 0.789 -0.595 O15 A1AAL 32 A1AAL O23 O3 O 0 1 N N N N N N 46.088 35.459 -1.691 1.786 -1.781 -0.287 O23 A1AAL 33 A1AAL O25 O4 O 0 1 N N N N N N 44.463 36.506 -0.561 1.444 -0.084 1.073 O25 A1AAL 34 A1AAL O34 O5 O 0 1 N N N N N N 50.444 37.951 -2.622 -2.925 1.359 2.485 O34 A1AAL 35 A1AAL O35 O6 O 0 1 N N N N N N 51.935 40.658 0.709 -6.443 -0.808 0.871 O35 A1AAL 36 A1AAL H131 H1 H 0 0 N N N N N N 46.435 35.677 -5.790 3.615 3.358 1.281 H131 A1AAL 37 A1AAL H132 H2 H 0 0 N N N N N N 47.583 35.117 -7.053 3.282 1.669 1.731 H132 A1AAL 38 A1AAL H171 H3 H 0 0 N N N N N N 47.766 31.448 -4.404 6.841 0.263 0.694 H171 A1AAL 39 A1AAL H201 H4 H 0 0 N N N N N N 45.281 32.344 -0.227 3.904 -3.628 -0.011 H201 A1AAL 40 A1AAL H221 H5 H 0 0 N N N N N N 44.657 34.668 -2.935 2.753 -0.342 -1.406 H221 A1AAL 41 A1AAL H222 H6 H 0 0 N N N N N N 44.431 34.356 -1.181 2.913 -2.009 -1.997 H222 A1AAL 42 A1AAL H013 H7 H 0 0 N N N N N N 45.482 38.865 2.416 -0.947 -2.833 -2.667 H013 A1AAL 43 A1AAL H012 H8 H 0 0 N N N N N N 44.430 38.417 1.031 0.439 -1.719 -2.587 H012 A1AAL 44 A1AAL H011 H9 H 0 0 N N N N N N 45.222 37.135 2.009 0.328 -3.086 -1.451 H011 A1AAL 45 A1AAL H041 H10 H 0 0 N N N N N N 48.189 36.560 -1.800 -0.741 0.569 1.538 H041 A1AAL 46 A1AAL H061 H11 H 0 0 N N N N N N 46.360 39.809 -1.539 -2.999 1.371 -1.127 H061 A1AAL 47 A1AAL H071 H12 H 0 0 N N N N N N 45.449 41.034 -3.469 -2.999 3.479 -2.372 H071 A1AAL 48 A1AAL H081 H13 H 0 0 N N N N N N 45.789 40.162 -5.737 -1.065 4.995 -2.234 H081 A1AAL 49 A1AAL H091 H14 H 0 0 N N N N N N 47.049 38.093 -6.090 0.876 4.388 -0.853 H091 A1AAL 50 A1AAL H122 H15 H 0 0 N N N N N N 49.426 35.533 -5.302 2.426 3.187 -0.747 H122 A1AAL 51 A1AAL H121 H16 H 0 0 N N N N N N 48.651 36.961 -6.069 2.509 1.413 -0.764 H121 A1AAL 52 A1AAL H141 H17 H 0 0 N N N N N N 47.013 33.093 -6.063 5.236 2.740 -0.329 H141 A1AAL 53 A1AAL H142 H18 H 0 0 N N N N N N 48.446 33.539 -5.075 5.550 1.653 1.040 H142 A1AAL 54 A1AAL H181 H19 H 0 0 N N N N N N 47.698 29.760 -2.603 7.505 -1.945 1.545 H181 A1AAL 55 A1AAL H191 H20 H 0 0 N N N N N N 46.418 30.179 -0.543 6.036 -3.891 1.192 H191 A1AAL 56 A1AAL H291 H21 H 0 0 N N N N N N 49.048 39.772 2.843 -4.616 -2.077 -2.001 H291 A1AAL 57 A1AAL H292 H22 H 0 0 N N N N N N 50.698 40.467 2.691 -6.177 -1.821 -1.185 H292 A1AAL 58 A1AAL H301 H23 H 0 0 N N N N N N 49.035 42.195 3.168 -4.009 -3.780 -0.304 H301 A1AAL 59 A1AAL H302 H24 H 0 0 N N N N N N 49.767 42.424 1.543 -5.570 -3.524 0.512 H302 A1AAL 60 A1AAL H303 H25 H 0 0 N N N N N N 48.118 41.729 1.696 -5.526 -4.212 -1.129 H303 A1AAL 61 A1AAL H321 H26 H 0 0 N N N N N N 52.105 39.367 -1.489 -5.277 0.684 2.407 H321 A1AAL 62 A1AAL H361 H27 H 0 0 N N N N N N 47.525 39.469 1.962 -2.739 -1.887 -1.940 H361 A1AAL 63 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1AAL C13 C12 SING N N 1 A1AAL C13 C14 SING N N 2 A1AAL C12 O11 SING N N 3 A1AAL C14 O15 SING N N 4 A1AAL C09 C08 DOUB Y N 5 A1AAL C09 C10 SING Y N 6 A1AAL C08 C07 SING Y N 7 A1AAL O15 C16 SING N N 8 A1AAL O11 C10 SING N N 9 A1AAL C10 C05 DOUB Y N 10 A1AAL C07 C06 DOUB Y N 11 A1AAL C17 C16 DOUB Y N 12 A1AAL C17 C18 SING Y N 13 A1AAL C16 C21 SING Y N 14 A1AAL C05 C06 SING Y N 15 A1AAL C05 C04 SING N N 16 A1AAL O34 C33 DOUB N N 17 A1AAL C18 C19 DOUB Y N 18 A1AAL C21 C22 SING N N 19 A1AAL C21 C20 DOUB Y N 20 A1AAL C22 O23 SING N N 21 A1AAL O23 C24 SING N N 22 A1AAL C33 N32 SING N N 23 A1AAL C33 C26 SING N N 24 A1AAL C04 C26 SING N N 25 A1AAL C04 C03 SING N N 26 A1AAL C19 C20 SING Y N 27 A1AAL N32 C31 SING N N 28 A1AAL C26 C27 DOUB N N 29 A1AAL C24 O25 DOUB N N 30 A1AAL C24 C03 SING N N 31 A1AAL C03 C02 DOUB N N 32 A1AAL C31 O35 DOUB N N 33 A1AAL C31 N28 SING N N 34 A1AAL C27 N28 SING N N 35 A1AAL C27 N36 SING N N 36 A1AAL C02 N36 SING N N 37 A1AAL C02 C01 SING N N 38 A1AAL N28 C29 SING N N 39 A1AAL C30 C29 SING N N 40 A1AAL C13 H131 SING N N 41 A1AAL C13 H132 SING N N 42 A1AAL C17 H171 SING N N 43 A1AAL C20 H201 SING N N 44 A1AAL C22 H221 SING N N 45 A1AAL C22 H222 SING N N 46 A1AAL C01 H013 SING N N 47 A1AAL C01 H012 SING N N 48 A1AAL C01 H011 SING N N 49 A1AAL C04 H041 SING N N 50 A1AAL C06 H061 SING N N 51 A1AAL C07 H071 SING N N 52 A1AAL C08 H081 SING N N 53 A1AAL C09 H091 SING N N 54 A1AAL C12 H122 SING N N 55 A1AAL C12 H121 SING N N 56 A1AAL C14 H141 SING N N 57 A1AAL C14 H142 SING N N 58 A1AAL C18 H181 SING N N 59 A1AAL C19 H191 SING N N 60 A1AAL C29 H291 SING N N 61 A1AAL C29 H292 SING N N 62 A1AAL C30 H301 SING N N 63 A1AAL C30 H302 SING N N 64 A1AAL C30 H303 SING N N 65 A1AAL N32 H321 SING N N 66 A1AAL N36 H361 SING N N 67 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1AAL SMILES ACDLabs 12.01 "O=C1OCc2ccccc2OCCCOc2ccccc2C2C1=C(C)NC=1N(CC)C(=O)NC(=O)C=12" A1AAL InChI InChI 1.06 "InChI=1S/C27H27N3O6/c1-3-30-24-23(25(31)29-27(30)33)22-18-10-5-7-12-20(18)35-14-8-13-34-19-11-6-4-9-17(19)15-36-26(32)21(22)16(2)28-24/h4-7,9-12,22,28H,3,8,13-15H2,1-2H3,(H,29,31,33)/t22-/m1/s1" A1AAL InChIKey InChI 1.06 RGIXLJBDKWVKHS-JOCHJYFZSA-N A1AAL SMILES_CANONICAL CACTVS 3.385 "CCN1C(=O)NC(=O)C2=C1NC(=C3[C@H]2c4ccccc4OCCCOc5ccccc5COC3=O)C" A1AAL SMILES CACTVS 3.385 "CCN1C(=O)NC(=O)C2=C1NC(=C3[CH]2c4ccccc4OCCCOc5ccccc5COC3=O)C" A1AAL SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCN1C2=C([C@@H]3c4ccccc4OCCCOc5ccccc5COC(=O)C3=C(N2)C)C(=O)NC1=O" A1AAL SMILES "OpenEye OEToolkits" 2.0.7 "CCN1C2=C(C3c4ccccc4OCCCOc5ccccc5COC(=O)C3=C(N2)C)C(=O)NC1=O" # _pdbx_chem_comp_identifier.comp_id A1AAL _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program ACDLabs _pdbx_chem_comp_identifier.program_version 12.01 _pdbx_chem_comp_identifier.identifier "(4bS)-1-ethyl-21-methyl-4b,11,12,22-tetrahydro-2H,10H,18H-dibenzo[13',14':6',7'][1,5,9]trioxacyclotetradecino[12',11':4,5]pyrido[2,3-d]pyrimidine-2,4,20(1H,3H)-trione" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1AAL "Create component" 2023-12-17 RCSB A1AAL "Initial release" 2025-03-19 RCSB #