data_A1AAY # _chem_comp.id A1AAY _chem_comp.name "{3-[([1,1'-biphenyl]-2-yl)ethynyl]-1H-indazol-5-yl}[(3R)-3-(dimethylamino)pyrrolidin-1-yl]methanone" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C28 H26 N4 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-01-02 _chem_comp.pdbx_modified_date 2024-05-31 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 434.532 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1AAY _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8VF6 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1AAY C01 C1 C 0 1 N N N N N N -6.203 24.792 -30.031 -7.002 2.729 0.171 C01 A1AAY 1 A1AAY C03 C2 C 0 1 N N N N N N -6.610 27.058 -29.408 -5.090 4.207 0.024 C03 A1AAY 2 A1AAY C04 C3 C 0 1 N N R N N N -7.697 26.173 -31.403 -4.760 1.822 0.284 C04 A1AAY 3 A1AAY C05 C4 C 0 1 N N N N N N -8.705 27.355 -31.428 -3.312 1.924 -0.264 C05 A1AAY 4 A1AAY C06 C5 C 0 1 N N N N N N -9.642 27.018 -32.675 -2.795 0.475 -0.146 C06 A1AAY 5 A1AAY C08 C6 C 0 1 N N N N N N -10.518 24.829 -33.631 -3.944 -1.748 0.014 C08 A1AAY 6 A1AAY C10 C7 C 0 1 Y N N N N N -11.664 25.404 -34.545 -2.654 -2.465 -0.006 C10 A1AAY 7 A1AAY C11 C8 C 0 1 Y N N N N N -12.969 24.845 -34.465 -2.632 -3.868 -0.035 C11 A1AAY 8 A1AAY C12 C9 C 0 1 Y N N N N N -13.996 25.333 -35.279 -1.449 -4.543 -0.053 C12 A1AAY 9 A1AAY C13 C10 C 0 1 Y N N N N N -13.734 26.391 -36.203 -0.242 -3.844 -0.043 C13 A1AAY 10 A1AAY C16 C11 C 0 1 Y N N N N N -12.504 27.967 -37.294 1.158 -2.015 -0.011 C16 A1AAY 11 A1AAY C17 C12 C 0 1 N N N N N N -11.325 28.854 -37.743 1.640 -0.667 0.014 C17 A1AAY 12 A1AAY C18 C13 C 0 1 N N N N N N -10.399 29.544 -38.089 2.035 0.438 0.035 C18 A1AAY 13 A1AAY C19 C14 C 0 1 Y N N N N N -9.258 30.404 -38.522 2.517 1.787 0.061 C19 A1AAY 14 A1AAY C20 C15 C 0 1 Y N N N N N -9.506 31.410 -39.478 1.617 2.855 0.091 C20 A1AAY 15 A1AAY C21 C16 C 0 1 Y N N N N N -8.476 32.235 -39.910 2.088 4.151 0.116 C21 A1AAY 16 A1AAY C22 C17 C 0 1 Y N N N N N -7.190 32.062 -39.402 3.450 4.403 0.111 C22 A1AAY 17 A1AAY C23 C18 C 0 1 Y N N N N N -6.937 31.057 -38.453 4.355 3.361 0.081 C23 A1AAY 18 A1AAY C24 C19 C 0 1 Y N N N N N -7.951 30.226 -38.014 3.901 2.045 0.061 C24 A1AAY 19 A1AAY C25 C20 C 0 1 Y N N N N N -7.627 29.247 -37.058 4.869 0.923 0.034 C25 A1AAY 20 A1AAY C26 C21 C 0 1 Y N N N N N -7.891 27.861 -37.289 4.739 -0.135 0.934 C26 A1AAY 21 A1AAY C27 C22 C 0 1 Y N N N N N -7.540 26.897 -36.314 5.643 -1.177 0.904 C27 A1AAY 22 A1AAY C28 C23 C 0 1 Y N N N N N -6.916 27.292 -35.133 6.677 -1.173 -0.015 C28 A1AAY 23 A1AAY C29 C24 C 0 1 Y N N N N N -6.635 28.673 -34.903 6.812 -0.126 -0.909 C29 A1AAY 24 A1AAY C30 C25 C 0 1 Y N N N N N -6.990 29.637 -35.876 5.910 0.918 -0.893 C30 A1AAY 25 A1AAY C31 C26 C 0 1 Y N N N N N -12.447 26.941 -36.294 -0.250 -2.436 -0.015 C31 A1AAY 26 A1AAY C32 C27 C 0 1 Y N N N N N -11.403 26.449 -35.473 -1.462 -1.749 -0.002 C32 A1AAY 27 A1AAY C33 C28 C 0 1 N N N N N N -8.431 25.099 -31.861 -5.187 0.421 -0.220 C33 A1AAY 28 A1AAY N02 N1 N 0 1 N N N N N N -7.211 25.884 -29.992 -5.615 2.871 -0.289 N02 A1AAY 29 A1AAY N07 N2 N 0 1 N N N N N N -9.625 25.675 -32.804 -3.972 -0.407 -0.107 N07 A1AAY 30 A1AAY N14 N3 N 0 1 Y N N N N N -14.525 27.043 -37.094 1.071 -4.234 -0.056 N14 A1AAY 31 A1AAY N15 N4 N 0 1 Y N N N N N -13.764 28.007 -37.759 1.893 -3.104 -0.036 N15 A1AAY 32 A1AAY O09 O1 O 0 1 N N N N N N -10.355 23.686 -33.614 -4.983 -2.369 0.139 O09 A1AAY 33 A1AAY H1 H1 H 0 1 N N N N N N -5.850 24.581 -29.011 -7.035 2.807 1.258 H1 A1AAY 34 A1AAY H2 H2 H 0 1 N N N N N N -6.660 23.886 -30.455 -7.613 3.518 -0.268 H2 A1AAY 35 A1AAY H3 H3 H 0 1 N N N N N N -5.352 25.100 -30.657 -7.389 1.757 -0.135 H3 A1AAY 36 A1AAY H4 H4 H 0 1 N N N N N N -6.266 26.826 -28.389 -5.053 4.339 1.105 H4 A1AAY 37 A1AAY H5 H5 H 0 1 N N N N N N -5.753 27.375 -30.021 -4.087 4.309 -0.389 H5 A1AAY 38 A1AAY H6 H6 H 0 1 N N N N N N -7.352 27.869 -29.369 -5.741 4.964 -0.412 H6 A1AAY 39 A1AAY H7 H7 H 0 1 N N N N N N -6.843 26.402 -32.057 -4.770 1.865 1.373 H7 A1AAY 40 A1AAY H8 H8 H 0 1 N N N N N N -8.184 28.313 -31.575 -3.315 2.248 -1.304 H8 A1AAY 41 A1AAY H9 H9 H 0 1 N N N N N N -9.289 27.394 -30.497 -2.715 2.600 0.348 H9 A1AAY 42 A1AAY H10 H10 H 0 1 N N N N N N -9.251 27.494 -33.586 -2.177 0.230 -1.009 H10 A1AAY 43 A1AAY H11 H11 H 0 1 N N N N N N -10.667 27.371 -32.488 -2.215 0.362 0.770 H11 A1AAY 44 A1AAY H12 H12 H 0 1 N N N N N N -13.168 24.040 -33.773 -3.562 -4.417 -0.043 H12 A1AAY 45 A1AAY H13 H13 H 0 1 N N N N N N -14.987 24.910 -35.209 -1.446 -5.623 -0.075 H13 A1AAY 46 A1AAY H14 H14 H 0 1 N N N N N N -10.502 31.540 -39.876 0.554 2.666 0.095 H14 A1AAY 47 A1AAY H15 H15 H 0 1 N N N N N N -8.671 33.009 -40.638 1.390 4.975 0.139 H15 A1AAY 48 A1AAY H16 H16 H 0 1 N N N N N N -6.387 32.701 -39.738 3.807 5.422 0.130 H16 A1AAY 49 A1AAY H17 H17 H 0 1 N N N N N N -5.938 30.932 -38.062 5.415 3.566 0.077 H17 A1AAY 50 A1AAY H18 H18 H 0 1 N N N N N N -8.360 27.549 -38.210 3.932 -0.139 1.652 H18 A1AAY 51 A1AAY H19 H19 H 0 1 N N N N N N -7.756 25.853 -36.486 5.543 -1.997 1.600 H19 A1AAY 52 A1AAY H20 H20 H 0 1 N N N N N N -6.645 26.555 -34.392 7.383 -1.990 -0.034 H20 A1AAY 53 A1AAY H21 H21 H 0 1 N N N N N N -6.152 28.981 -33.987 7.622 -0.128 -1.623 H21 A1AAY 54 A1AAY H22 H22 H 0 1 N N N N N N -6.768 30.680 -35.705 6.013 1.733 -1.595 H22 A1AAY 55 A1AAY H23 H23 H 0 1 N N N N N N -10.410 26.867 -35.552 -1.475 -0.669 0.014 H23 A1AAY 56 A1AAY H24 H24 H 0 1 N N N N N N -8.859 24.549 -31.010 -5.982 0.018 0.408 H24 A1AAY 57 A1AAY H25 H25 H 0 1 N N N N N N -7.785 24.427 -32.445 -5.515 0.475 -1.258 H25 A1AAY 58 A1AAY H27 H27 H 0 1 N N N N N N -15.496 26.862 -37.249 1.382 -5.153 -0.075 H27 A1AAY 59 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1AAY C21 C20 DOUB Y N 1 A1AAY C21 C22 SING Y N 2 A1AAY C20 C19 SING Y N 3 A1AAY C22 C23 DOUB Y N 4 A1AAY C19 C18 SING N N 5 A1AAY C19 C24 DOUB Y N 6 A1AAY C23 C24 SING Y N 7 A1AAY C18 C17 TRIP N N 8 A1AAY C24 C25 SING N N 9 A1AAY N15 C16 DOUB Y N 10 A1AAY N15 N14 SING Y N 11 A1AAY C17 C16 SING N N 12 A1AAY C16 C31 SING Y N 13 A1AAY C26 C25 DOUB Y N 14 A1AAY C26 C27 SING Y N 15 A1AAY N14 C13 SING Y N 16 A1AAY C25 C30 SING Y N 17 A1AAY C27 C28 DOUB Y N 18 A1AAY C31 C13 DOUB Y N 19 A1AAY C31 C32 SING Y N 20 A1AAY C13 C12 SING Y N 21 A1AAY C30 C29 DOUB Y N 22 A1AAY C32 C10 DOUB Y N 23 A1AAY C12 C11 DOUB Y N 24 A1AAY C28 C29 SING Y N 25 A1AAY C10 C11 SING Y N 26 A1AAY C10 C08 SING N N 27 A1AAY C08 O09 DOUB N N 28 A1AAY C08 N07 SING N N 29 A1AAY N07 C06 SING N N 30 A1AAY N07 C33 SING N N 31 A1AAY C06 C05 SING N N 32 A1AAY C33 C04 SING N N 33 A1AAY C05 C04 SING N N 34 A1AAY C04 N02 SING N N 35 A1AAY C01 N02 SING N N 36 A1AAY N02 C03 SING N N 37 A1AAY C01 H1 SING N N 38 A1AAY C01 H2 SING N N 39 A1AAY C01 H3 SING N N 40 A1AAY C03 H4 SING N N 41 A1AAY C03 H5 SING N N 42 A1AAY C03 H6 SING N N 43 A1AAY C04 H7 SING N N 44 A1AAY C05 H8 SING N N 45 A1AAY C05 H9 SING N N 46 A1AAY C06 H10 SING N N 47 A1AAY C06 H11 SING N N 48 A1AAY C11 H12 SING N N 49 A1AAY C12 H13 SING N N 50 A1AAY C20 H14 SING N N 51 A1AAY C21 H15 SING N N 52 A1AAY C22 H16 SING N N 53 A1AAY C23 H17 SING N N 54 A1AAY C26 H18 SING N N 55 A1AAY C27 H19 SING N N 56 A1AAY C28 H20 SING N N 57 A1AAY C29 H21 SING N N 58 A1AAY C30 H22 SING N N 59 A1AAY C32 H23 SING N N 60 A1AAY C33 H24 SING N N 61 A1AAY C33 H25 SING N N 62 A1AAY N14 H27 SING N N 63 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1AAY SMILES ACDLabs 12.01 "CN(C)C1CCN(C1)C(=O)c1cc2c(cc1)[NH]nc2C#Cc1ccccc1c1ccccc1" A1AAY InChI InChI 1.06 "InChI=1S/C28H26N4O/c1-31(2)23-16-17-32(19-23)28(33)22-13-15-27-25(18-22)26(29-30-27)14-12-21-10-6-7-11-24(21)20-8-4-3-5-9-20/h3-11,13,15,18,23H,16-17,19H2,1-2H3,(H,29,30)/t23-/m1/s1" A1AAY InChIKey InChI 1.06 ZRBBUAGMFWALNG-HSZRJFAPSA-N A1AAY SMILES_CANONICAL CACTVS 3.385 "CN(C)[C@@H]1CCN(C1)C(=O)c2ccc3[nH]nc(C#Cc4ccccc4c5ccccc5)c3c2" A1AAY SMILES CACTVS 3.385 "CN(C)[CH]1CCN(C1)C(=O)c2ccc3[nH]nc(C#Cc4ccccc4c5ccccc5)c3c2" A1AAY SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN(C)[C@@H]1CCN(C1)C(=O)c2ccc3c(c2)c(n[nH]3)C#Cc4ccccc4c5ccccc5" A1AAY SMILES "OpenEye OEToolkits" 2.0.7 "CN(C)C1CCN(C1)C(=O)c2ccc3c(c2)c(n[nH]3)C#Cc4ccccc4c5ccccc5" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1AAY "SYSTEMATIC NAME" ACDLabs 12.01 "{3-[([1,1'-biphenyl]-2-yl)ethynyl]-1H-indazol-5-yl}[(3R)-3-(dimethylamino)pyrrolidin-1-yl]methanone" A1AAY "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "[(3~{R})-3-(dimethylamino)pyrrolidin-1-yl]-[3-[2-(2-phenylphenyl)ethynyl]-1~{H}-indazol-5-yl]methanone" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1AAY "Create component" 2024-01-02 RCSB A1AAY "Initial release" 2024-06-05 RCSB #