data_A1AB7 # _chem_comp.id A1AB7 _chem_comp.name "N-[1,5-dimethyl-4-(2-{[(2M)-2'-(piperazin-1-yl)[2,4'-bipyridin]-3-yl]oxy}ethyl)-1H-pyrazole-3-carbonyl]glycine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H29 N7 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-01-09 _chem_comp.pdbx_modified_date 2024-07-12 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 479.532 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1AB7 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8VKA _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1AB7 C01 C1 C 0 1 N N N N N N 29.344 14.533 25.953 -2.691 4.003 -1.389 C01 A1AB7 1 A1AB7 C02 C2 C 0 1 Y N N N N N 28.206 13.533 25.786 -3.552 2.793 -1.131 C02 A1AB7 2 A1AB7 C03 C3 C 0 1 Y N N N N N 26.993 13.534 26.438 -3.116 1.528 -0.921 C03 A1AB7 3 A1AB7 C04 C4 C 0 1 Y N N N N N 26.269 12.435 25.968 -4.285 0.753 -0.728 C04 A1AB7 4 A1AB7 C05 C5 C 0 1 N N N N N N 24.867 11.968 26.350 -4.342 -0.698 -0.461 C05 A1AB7 5 A1AB7 C07 C6 C 0 1 N N N N N N 23.067 11.511 28.036 -5.591 -2.746 -0.032 C07 A1AB7 6 A1AB7 C08 C7 C 0 1 N N N N N N 22.021 12.620 27.948 -7.029 -3.174 0.110 C08 A1AB7 7 A1AB7 C14 C8 C 0 1 N N N N N N 29.311 12.147 24.095 -5.769 3.937 -1.226 C14 A1AB7 8 A1AB7 C15 C9 C 0 1 N N N N N N 26.541 14.560 27.490 -1.689 1.047 -0.899 C15 A1AB7 9 A1AB7 C16 C10 C 0 1 N N N N N N 25.770 15.732 26.871 -1.141 1.141 0.526 C16 A1AB7 10 A1AB7 C18 C11 C 0 1 Y N N N N N 26.142 17.939 26.023 0.852 0.704 1.746 C18 A1AB7 11 A1AB7 C19 C12 C 0 1 Y N N N N N 26.951 18.830 25.324 2.179 0.279 1.850 C19 A1AB7 12 A1AB7 C20 C13 C 0 1 Y N N N N N 28.423 18.542 25.075 2.897 -0.196 0.642 C20 A1AB7 13 A1AB7 C21 C14 C 0 1 Y N N N N N 28.993 18.961 23.888 4.261 0.046 0.479 C21 A1AB7 14 A1AB7 C22 C15 C 0 1 Y N N N N N 30.335 18.715 23.647 4.893 -0.417 -0.668 C22 A1AB7 15 A1AB7 C24 C16 C 0 1 N N N N N N 30.225 19.859 21.293 6.723 -0.753 -2.117 C24 A1AB7 16 A1AB7 C25 C17 C 0 1 N N N N N N 30.971 21.083 20.761 8.201 -0.407 -2.312 C25 A1AB7 17 A1AB7 C27 C18 C 0 1 N N N N N N 33.048 20.204 21.534 8.508 -0.366 0.089 C27 A1AB7 18 A1AB7 C28 C19 C 0 1 N N N N N N 32.365 18.951 22.066 7.030 -0.712 0.284 C28 A1AB7 19 A1AB7 C30 C20 C 0 1 Y N N N N N 30.560 17.688 25.683 2.926 -1.330 -1.468 C30 A1AB7 20 A1AB7 C31 C21 C 0 1 Y N N N N N 29.225 17.894 26.007 2.225 -0.905 -0.361 C31 A1AB7 21 A1AB7 C33 C22 C 0 1 Y N N N N N 25.196 20.301 25.020 2.201 0.712 4.117 C33 A1AB7 22 A1AB7 C34 C23 C 0 1 Y N N N N N 24.330 19.477 25.712 0.889 1.153 4.088 C34 A1AB7 23 A1AB7 C35 C24 C 0 1 Y N N N N N 24.803 18.271 26.221 0.197 1.151 2.888 C35 A1AB7 24 A1AB7 N06 N1 N 0 1 N N N N N N 24.407 11.985 27.723 -5.534 -1.306 -0.297 N06 A1AB7 25 A1AB7 N12 N2 N 0 1 Y N N N N N 27.037 11.807 25.066 -5.311 1.574 -0.830 N12 A1AB7 26 A1AB7 N13 N3 N 0 1 Y N N N N N 28.209 12.505 24.976 -4.900 2.769 -1.060 N13 A1AB7 27 A1AB7 N23 N4 N 0 1 N N N N N N 30.940 19.166 22.400 6.253 -0.184 -0.846 N23 A1AB7 28 A1AB7 N26 N5 N 0 1 N N N N N N 32.342 20.857 20.491 8.978 -0.935 -1.182 N26 A1AB7 29 A1AB7 N29 N6 N 0 1 Y N N N N N 31.080 18.093 24.533 4.216 -1.079 -1.594 N29 A1AB7 30 A1AB7 N32 N7 N 0 1 Y N N N N N 26.460 19.964 24.843 2.802 0.298 3.021 N32 A1AB7 31 A1AB7 O09 O1 O 0 1 N N N N N N 22.368 13.799 27.706 -7.915 -2.360 0.002 O09 A1AB7 32 A1AB7 O10 O2 O 0 1 N N N N N N 20.799 12.343 28.117 -7.326 -4.459 0.357 O10 A1AB7 33 A1AB7 O11 O3 O 0 1 N N N N N N 24.150 11.568 25.491 -3.315 -1.345 -0.390 O11 A1AB7 34 A1AB7 O17 O4 O 0 1 N N N N N N 26.685 16.732 26.511 0.213 0.685 0.547 O17 A1AB7 35 A1AB7 H012 H1 H 0 0 N N N N N N 30.024 14.186 26.745 -2.435 4.475 -0.440 H012 A1AB7 36 A1AB7 H013 H2 H 0 0 N N N N N N 29.897 14.620 25.006 -1.779 3.698 -1.901 H013 A1AB7 37 A1AB7 H011 H3 H 0 0 N N N N N N 28.932 15.515 26.228 -3.238 4.711 -2.011 H011 A1AB7 38 A1AB7 H072 H4 H 0 0 N N N N N N 22.799 10.715 27.325 -5.053 -2.968 0.889 H072 A1AB7 39 A1AB7 H071 H5 H 0 0 N N N N N N 23.066 11.105 29.058 -5.132 -3.286 -0.860 H071 A1AB7 40 A1AB7 H141 H6 H 0 0 N N N N N N 29.048 11.242 23.527 -6.034 4.046 -2.278 H141 A1AB7 41 A1AB7 H143 H7 H 0 0 N N N N N N 29.505 12.974 23.396 -6.674 3.802 -0.635 H143 A1AB7 42 A1AB7 H142 H8 H 0 0 N N N N N N 30.212 11.954 24.695 -5.244 4.830 -0.889 H142 A1AB7 43 A1AB7 H152 H9 H 0 0 N N N N N N 25.890 14.055 28.219 -1.649 0.011 -1.236 H152 A1AB7 44 A1AB7 H151 H10 H 0 0 N N N N N N 27.430 14.954 28.004 -1.086 1.667 -1.562 H151 A1AB7 45 A1AB7 H161 H11 H 0 0 N N N N N N 25.228 15.388 25.978 -1.180 2.177 0.863 H161 A1AB7 46 A1AB7 H162 H12 H 0 0 N N N N N N 25.054 16.132 27.604 -1.744 0.521 1.189 H162 A1AB7 47 A1AB7 H211 H13 H 0 0 N N N N N N 28.395 19.478 23.152 4.816 0.586 1.232 H211 A1AB7 48 A1AB7 H242 H14 H 0 0 N N N N N N 30.089 19.147 20.466 6.140 -0.338 -2.939 H242 A1AB7 49 A1AB7 H241 H15 H 0 0 N N N N N N 29.241 20.184 21.663 6.602 -1.837 -2.097 H241 A1AB7 50 A1AB7 H251 H16 H 0 0 N N N N N N 30.485 21.405 19.828 8.559 -0.853 -3.240 H251 A1AB7 51 A1AB7 H252 H17 H 0 0 N N N N N N 30.895 21.885 21.510 8.317 0.675 -2.360 H252 A1AB7 52 A1AB7 H271 H18 H 0 0 N N N N N N 34.040 19.920 21.153 8.628 0.717 0.069 H271 A1AB7 53 A1AB7 H272 H19 H 0 0 N N N N N N 33.164 20.913 22.367 9.090 -0.781 0.911 H272 A1AB7 54 A1AB7 H282 H20 H 0 0 N N N N N N 32.430 18.164 21.300 6.913 -1.795 0.331 H282 A1AB7 55 A1AB7 H281 H21 H 0 0 N N N N N N 32.892 18.623 22.974 6.671 -0.266 1.212 H281 A1AB7 56 A1AB7 H301 H22 H 0 0 N N N N N N 31.196 17.180 26.393 2.411 -1.873 -2.247 H301 A1AB7 57 A1AB7 H311 H23 H 0 0 N N N N N N 28.823 17.561 26.953 1.169 -1.115 -0.268 H311 A1AB7 58 A1AB7 H331 H24 H 0 0 N N N N N N 24.833 21.235 24.618 2.742 0.713 5.052 H331 A1AB7 59 A1AB7 H341 H25 H 0 0 N N N N N N 23.299 19.765 25.856 0.408 1.490 4.994 H341 A1AB7 60 A1AB7 H351 H26 H 0 0 N N N N N N 24.145 17.605 26.759 -0.827 1.491 2.840 H351 A1AB7 61 A1AB7 H061 H27 H 0 0 N N N N N N 25.006 12.320 28.451 -6.354 -0.791 -0.354 H061 A1AB7 62 A1AB7 H262 H28 H 0 0 N N N N N N 32.409 20.293 19.668 8.946 -1.943 -1.160 H262 A1AB7 63 A1AB7 H1 H30 H 0 1 N N N N N N 20.280 13.133 28.029 -8.262 -4.686 0.441 H1 A1AB7 64 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1AB7 C02 C01 SING N N 1 A1AB7 C03 C02 DOUB Y N 2 A1AB7 C07 N06 SING N N 3 A1AB7 C08 C07 SING N N 4 A1AB7 O09 C08 DOUB N N 5 A1AB7 O10 C08 SING N N 6 A1AB7 N06 C05 SING N N 7 A1AB7 O11 C05 DOUB N N 8 A1AB7 C05 C04 SING N N 9 A1AB7 N12 C04 DOUB Y N 10 A1AB7 N13 N12 SING Y N 11 A1AB7 C14 N13 SING N N 12 A1AB7 C04 C03 SING Y N 13 A1AB7 C15 C03 SING N N 14 A1AB7 C16 C15 SING N N 15 A1AB7 O17 C16 SING N N 16 A1AB7 C18 O17 SING N N 17 A1AB7 C19 C18 DOUB Y N 18 A1AB7 C21 C20 DOUB Y N 19 A1AB7 C22 C21 SING Y N 20 A1AB7 C24 N23 SING N N 21 A1AB7 C25 C24 SING N N 22 A1AB7 N26 C25 SING N N 23 A1AB7 C27 N26 SING N N 24 A1AB7 C28 C27 SING N N 25 A1AB7 N23 C22 SING N N 26 A1AB7 N29 C22 DOUB Y N 27 A1AB7 C30 N29 SING Y N 28 A1AB7 C31 C30 DOUB Y N 29 A1AB7 C20 C19 SING N N 30 A1AB7 N32 C19 SING Y N 31 A1AB7 C33 N32 DOUB Y N 32 A1AB7 C34 C33 SING Y N 33 A1AB7 C35 C34 DOUB Y N 34 A1AB7 C02 N13 SING Y N 35 A1AB7 C18 C35 SING Y N 36 A1AB7 C20 C31 SING Y N 37 A1AB7 N23 C28 SING N N 38 A1AB7 C01 H012 SING N N 39 A1AB7 C01 H013 SING N N 40 A1AB7 C01 H011 SING N N 41 A1AB7 C07 H072 SING N N 42 A1AB7 C07 H071 SING N N 43 A1AB7 C14 H141 SING N N 44 A1AB7 C14 H143 SING N N 45 A1AB7 C14 H142 SING N N 46 A1AB7 C15 H152 SING N N 47 A1AB7 C15 H151 SING N N 48 A1AB7 C16 H161 SING N N 49 A1AB7 C16 H162 SING N N 50 A1AB7 C21 H211 SING N N 51 A1AB7 C24 H242 SING N N 52 A1AB7 C24 H241 SING N N 53 A1AB7 C25 H251 SING N N 54 A1AB7 C25 H252 SING N N 55 A1AB7 C27 H271 SING N N 56 A1AB7 C27 H272 SING N N 57 A1AB7 C28 H282 SING N N 58 A1AB7 C28 H281 SING N N 59 A1AB7 C30 H301 SING N N 60 A1AB7 C31 H311 SING N N 61 A1AB7 C33 H331 SING N N 62 A1AB7 C34 H341 SING N N 63 A1AB7 C35 H351 SING N N 64 A1AB7 N06 H061 SING N N 65 A1AB7 N26 H262 SING N N 66 A1AB7 O10 H1 SING N N 67 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1AB7 SMILES ACDLabs 12.01 "O=C(NCC(=O)O)c1nn(C)c(C)c1CCOc1cccnc1c1ccnc(c1)N1CCNCC1" A1AB7 InChI InChI 1.06 "InChI=1S/C24H29N7O4/c1-16-18(23(29-30(16)2)24(34)28-15-21(32)33)6-13-35-19-4-3-7-27-22(19)17-5-8-26-20(14-17)31-11-9-25-10-12-31/h3-5,7-8,14,25H,6,9-13,15H2,1-2H3,(H,28,34)(H,32,33)" A1AB7 InChIKey InChI 1.06 DIEPVGQTGONRKV-UHFFFAOYSA-N A1AB7 SMILES_CANONICAL CACTVS 3.385 "Cn1nc(C(=O)NCC(O)=O)c(CCOc2cccnc2c3ccnc(c3)N4CCNCC4)c1C" A1AB7 SMILES CACTVS 3.385 "Cn1nc(C(=O)NCC(O)=O)c(CCOc2cccnc2c3ccnc(c3)N4CCNCC4)c1C" A1AB7 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1c(c(nn1C)C(=O)NCC(=O)O)CCOc2cccnc2c3ccnc(c3)N4CCNCC4" A1AB7 SMILES "OpenEye OEToolkits" 2.0.7 "Cc1c(c(nn1C)C(=O)NCC(=O)O)CCOc2cccnc2c3ccnc(c3)N4CCNCC4" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1AB7 "SYSTEMATIC NAME" ACDLabs 12.01 "N-[1,5-dimethyl-4-(2-{[(2M)-2'-(piperazin-1-yl)[2,4'-bipyridin]-3-yl]oxy}ethyl)-1H-pyrazole-3-carbonyl]glycine" A1AB7 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-[[1,5-dimethyl-4-[2-[2-(2-piperazin-1-ylpyridin-4-yl)pyridin-3-yl]oxyethyl]pyrazol-3-yl]carbonylamino]ethanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1AB7 "Create component" 2024-01-09 RCSB A1AB7 "Initial release" 2024-07-17 RCSB #