data_A1ACL # _chem_comp.id A1ACL _chem_comp.name "5-[(5,6-dichloropyrimidin-4-yl)amino]-1,3-dihydro-2H-indol-2-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H8 Cl2 N4 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-01-12 _chem_comp.pdbx_modified_date 2024-12-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 295.124 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1ACL _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7GV7 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1ACL C1 C1 C 0 1 Y N N N N N 27.243 -10.243 13.329 -2.699 -0.349 0.011 C1 A1ACL 1 A1ACL N1 N1 N 0 1 N N N N N N 22.334 -9.546 19.269 4.977 0.848 0.338 N1 A1ACL 2 A1ACL C2 C2 C 0 1 Y N N N N N 26.168 -10.029 14.203 -1.374 0.089 -0.034 C2 A1ACL 3 A1ACL N2 N2 N 0 1 Y N N N N N 25.002 -9.488 13.789 -1.128 1.375 -0.266 N2 A1ACL 4 A1ACL C3 C3 C 0 1 Y N N N N N 25.460 -10.041 16.584 0.987 -0.335 0.234 C3 A1ACL 5 A1ACL N3 N3 N 0 1 Y N N N N N 25.876 -9.299 11.574 -3.378 1.847 -0.415 N3 A1ACL 6 A1ACL C4 C4 C 0 1 Y N N N N N 24.873 -8.771 16.647 1.260 0.890 0.829 C4 A1ACL 7 A1ACL C5 C5 C 0 1 Y N N N N N 23.815 -8.517 17.510 2.556 1.354 0.903 C5 A1ACL 8 A1ACL C6 C6 C 0 1 Y N N N N N 23.360 -9.551 18.321 3.603 0.597 0.382 C6 A1ACL 9 A1ACL C7 C7 C 0 1 N N N N N N 22.160 -10.773 19.829 5.657 -0.146 -0.258 C7 A1ACL 10 A1ACL C8 C8 C 0 1 N N N N N N 23.163 -11.712 19.195 4.646 -1.198 -0.663 C8 A1ACL 11 A1ACL C9 C9 C 0 1 Y N N N N N 23.926 -10.820 18.263 3.321 -0.628 -0.211 C9 A1ACL 12 A1ACL C10 C10 C 0 1 Y N N N N N 24.989 -11.066 17.402 2.029 -1.094 -0.287 C10 A1ACL 13 A1ACL C11 C11 C 0 1 Y N N N N N 24.932 -9.170 12.499 -2.117 2.227 -0.451 C11 A1ACL 14 A1ACL O O1 O 0 1 N N N N N N 21.330 -11.053 20.684 6.855 -0.192 -0.438 O A1ACL 15 A1ACL N N4 N 0 1 N N N N N N 26.250 -10.440 15.493 -0.330 -0.803 0.161 N A1ACL 16 A1ACL CL1 CL1 CL 0 0 N N N N N N 28.728 -10.983 13.803 -3.076 -2.017 0.311 CL1 A1ACL 17 A1ACL C C12 C 0 1 Y N N N N N 27.012 -9.815 11.999 -3.704 0.582 -0.184 C A1ACL 18 A1ACL CL CL2 CL 0 0 N N N N N N 28.272 -9.856 10.841 -5.371 0.098 -0.140 CL A1ACL 19 A1ACL H1 H1 H 0 1 N N N N N N 21.794 -8.739 19.507 5.392 1.650 0.693 H1 A1ACL 20 A1ACL H2 H2 H 0 1 N N N N N N 25.248 -7.979 16.016 0.453 1.482 1.234 H2 A1ACL 21 A1ACL H3 H3 H 0 1 N N N N N N 23.357 -7.540 17.550 2.761 2.308 1.366 H3 A1ACL 22 A1ACL H4 H4 H 0 1 N N N N N N 22.656 -12.517 18.643 4.648 -1.332 -1.744 H4 A1ACL 23 A1ACL H5 H5 H 0 1 N N N N N N 23.828 -12.150 19.954 4.856 -2.142 -0.161 H5 A1ACL 24 A1ACL H6 H6 H 0 1 N N N N N N 25.446 -12.044 17.367 1.824 -2.048 -0.750 H6 A1ACL 25 A1ACL H7 H7 H 0 1 N N N N N N 23.993 -8.756 12.163 -1.887 3.264 -0.642 H7 A1ACL 26 A1ACL H8 H8 H 0 1 N N N N N N 26.963 -11.112 15.693 -0.513 -1.752 0.247 H8 A1ACL 27 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1ACL CL C SING N N 1 A1ACL N3 C DOUB Y N 2 A1ACL N3 C11 SING Y N 3 A1ACL C C1 SING Y N 4 A1ACL C11 N2 DOUB Y N 5 A1ACL C1 CL1 SING N N 6 A1ACL C1 C2 DOUB Y N 7 A1ACL N2 C2 SING Y N 8 A1ACL C2 N SING N N 9 A1ACL N C3 SING N N 10 A1ACL C3 C4 DOUB Y N 11 A1ACL C3 C10 SING Y N 12 A1ACL C4 C5 SING Y N 13 A1ACL C10 C9 DOUB Y N 14 A1ACL C5 C6 DOUB Y N 15 A1ACL C9 C6 SING Y N 16 A1ACL C9 C8 SING N N 17 A1ACL C6 N1 SING N N 18 A1ACL C8 C7 SING N N 19 A1ACL N1 C7 SING N N 20 A1ACL C7 O DOUB N N 21 A1ACL N1 H1 SING N N 22 A1ACL C4 H2 SING N N 23 A1ACL C5 H3 SING N N 24 A1ACL C8 H4 SING N N 25 A1ACL C8 H5 SING N N 26 A1ACL C10 H6 SING N N 27 A1ACL C11 H7 SING N N 28 A1ACL N H8 SING N N 29 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1ACL SMILES ACDLabs 12.01 "Clc1c(Cl)ncnc1Nc1cc2CC(=O)Nc2cc1" A1ACL InChI InChI 1.06 "InChI=1S/C12H8Cl2N4O/c13-10-11(14)15-5-16-12(10)17-7-1-2-8-6(3-7)4-9(19)18-8/h1-3,5H,4H2,(H,18,19)(H,15,16,17)" A1ACL InChIKey InChI 1.06 BBFLDVQVTYHLEG-UHFFFAOYSA-N A1ACL SMILES_CANONICAL CACTVS 3.385 "Clc1ncnc(Nc2ccc3NC(=O)Cc3c2)c1Cl" A1ACL SMILES CACTVS 3.385 "Clc1ncnc(Nc2ccc3NC(=O)Cc3c2)c1Cl" A1ACL SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc2c(cc1Nc3c(c(ncn3)Cl)Cl)CC(=O)N2" A1ACL SMILES "OpenEye OEToolkits" 2.0.7 "c1cc2c(cc1Nc3c(c(ncn3)Cl)Cl)CC(=O)N2" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1ACL "SYSTEMATIC NAME" ACDLabs 12.01 "5-[(5,6-dichloropyrimidin-4-yl)amino]-1,3-dihydro-2H-indol-2-one" A1ACL "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "5-[[5,6-bis(chloranyl)pyrimidin-4-yl]amino]-1,3-dihydroindol-2-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1ACL "Create component" 2024-01-12 RCSB A1ACL "Initial release" 2024-12-11 RCSB #