data_A1ACX
#
_chem_comp.id A1ACX
_chem_comp.name "3-[oxidanyl-[2-(trimethyl-$l^{4}-azanyl)ethoxy]phosphoryl]oxypropyl hexadecanoate"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C24 H51 N O6 P"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 1
_chem_comp.pdbx_initial_date 2024-01-17
_chem_comp.pdbx_modified_date 2024-10-25
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 480.639
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code A1ACX
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 8VP6
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
_chem_comp.pdbx_pcm ?
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
A1ACX C10 C1 C 0 1 N N N N N N 134.253 108.489 88.370 -6.863 -0.350 0.069 C10 A1ACX 1
A1ACX C01 C2 C 0 1 N N N N N N 136.569 113.297 94.760 -18.082 0.797 -0.019 C01 A1ACX 2
A1ACX C02 C3 C 0 1 N N N N N N 135.095 113.011 95.034 -16.853 -0.091 0.184 C02 A1ACX 3
A1ACX C03 C4 C 0 1 N N N N N N 134.304 112.785 93.750 -15.585 0.732 -0.048 C03 A1ACX 4
A1ACX C04 C5 C 0 1 N N N N N N 133.086 111.895 93.975 -14.356 -0.156 0.155 C04 A1ACX 5
A1ACX C05 C6 C 0 1 N N N N N N 132.411 111.524 92.659 -13.087 0.667 -0.076 C05 A1ACX 6
A1ACX C06 C7 C 0 1 N N N N N N 132.183 110.021 92.549 -11.858 -0.221 0.127 C06 A1ACX 7
A1ACX C07 C8 C 0 1 N N N N N N 132.081 109.569 91.098 -10.590 0.603 -0.105 C07 A1ACX 8
A1ACX C08 C9 C 0 1 N N N N N N 133.285 108.724 90.695 -9.361 -0.286 0.098 C08 A1ACX 9
A1ACX C09 C10 C 0 1 N N N N N N 133.120 108.101 89.314 -8.092 0.538 -0.134 C09 A1ACX 10
A1ACX C11 C11 C 0 1 N N N N N N 134.293 107.583 87.144 -5.595 0.473 -0.163 C11 A1ACX 11
A1ACX C12 C12 C 0 1 N N N N N N 134.040 108.340 85.843 -4.366 -0.415 0.040 C12 A1ACX 12
A1ACX C13 C13 C 0 1 N N N N N N 133.884 107.380 84.667 -3.098 0.408 -0.192 C13 A1ACX 13
A1ACX C14 C14 C 0 1 N N N N N N 132.913 107.901 83.612 -1.868 -0.480 0.011 C14 A1ACX 14
A1ACX C15 C15 C 0 1 N N N N N N 132.415 106.789 82.692 -0.600 0.344 -0.221 C15 A1ACX 15
A1ACX C16 C16 C 0 1 N N N N N N 132.112 107.291 81.283 0.611 -0.531 -0.021 C16 A1ACX 16
A1ACX C19 C17 C 0 1 N N N N N N 130.700 106.426 79.632 2.961 -0.919 0.035 C19 A1ACX 17
A1ACX C20 C18 C 0 1 N N N N N N 130.723 105.463 78.451 4.273 -0.162 -0.182 C20 A1ACX 18
A1ACX C21 C19 C 0 1 N N N N N N 131.024 104.037 78.896 5.452 -1.111 0.038 C21 A1ACX 19
A1ACX C27 C20 C 0 1 N N N N N N 132.761 103.992 75.563 10.652 -0.386 -0.515 C27 A1ACX 20
A1ACX C28 C21 C 0 1 N N N N N N 131.885 103.273 74.538 11.459 0.840 -0.945 C28 A1ACX 21
A1ACX C30 C22 C 0 1 N N N N N N 130.126 104.833 74.883 10.022 2.346 0.247 C30 A1ACX 22
A1ACX C31 C23 C 0 1 N N N N N N 130.144 103.480 72.941 11.841 1.273 1.383 C31 A1ACX 23
A1ACX C32 C24 C 0 1 N N N N N N 131.732 105.216 73.183 12.283 2.981 -0.242 C32 A1ACX 24
A1ACX N29 N1 N 1 1 N N N N N N 130.973 104.200 73.890 11.401 1.860 0.111 N29 A1ACX 25
A1ACX O17 O1 O 0 1 N N N N N N 131.995 108.451 81.074 0.473 -1.694 0.276 O17 A1ACX 26
A1ACX O18 O2 O 0 1 N N N N N N 131.962 106.383 80.233 1.842 -0.019 -0.174 O18 A1ACX 27
A1ACX O22 O3 O 0 1 N N N N N N 130.968 103.202 77.777 6.677 -0.403 -0.164 O22 A1ACX 28
A1ACX O24 O4 O 0 1 N N N N N N 132.999 101.974 78.770 8.349 -1.543 1.515 O24 A1ACX 29
A1ACX O25 O5 O 0 1 N N N N N N 131.833 100.951 76.853 8.196 -2.282 -0.894 O25 A1ACX 30
A1ACX O26 O6 O 0 1 N N N N N N 133.295 103.042 76.442 9.267 -0.042 -0.439 O26 A1ACX 31
A1ACX P23 P1 P 0 1 N N N N N N 132.279 102.254 77.472 8.124 -1.094 -0.015 P23 A1ACX 32
A1ACX H1 H1 H 0 1 N N N N N N 135.210 108.407 88.907 -6.862 -0.741 1.086 H1 A1ACX 33
A1ACX H2 H2 H 0 1 N N N N N N 134.105 109.528 88.042 -6.893 -1.179 -0.639 H2 A1ACX 34
A1ACX H3 H3 H 0 1 N N N N N N 137.096 113.453 95.713 -18.053 1.625 0.689 H3 A1ACX 35
A1ACX H4 H4 H 0 1 N N N N N N 137.016 112.443 94.229 -18.084 1.188 -1.036 H4 A1ACX 36
A1ACX H5 H5 H 0 1 N N N N N N 136.658 114.201 94.140 -18.986 0.210 0.147 H5 A1ACX 37
A1ACX H6 H6 H 0 1 N N N N N N 134.662 113.868 95.571 -16.852 -0.482 1.202 H6 A1ACX 38
A1ACX H7 H7 H 0 1 N N N N N N 135.019 112.110 95.660 -16.883 -0.920 -0.523 H7 A1ACX 39
A1ACX H8 H8 H 0 1 N N N N N N 134.961 112.307 93.009 -15.587 1.123 -1.065 H8 A1ACX 40
A1ACX H9 H9 H 0 1 N N N N N N 133.966 113.759 93.366 -15.555 1.561 0.660 H9 A1ACX 41
A1ACX H10 H10 H 0 1 N N N N N N 132.364 112.432 94.608 -14.354 -0.547 1.173 H10 A1ACX 42
A1ACX H11 H11 H 0 1 N N N N N N 133.406 110.974 94.484 -14.385 -0.985 -0.552 H11 A1ACX 43
A1ACX H12 H12 H 0 1 N N N N N N 133.051 111.850 91.826 -13.089 1.058 -1.094 H12 A1ACX 44
A1ACX H13 H13 H 0 1 N N N N N N 131.440 112.038 92.599 -13.058 1.496 0.631 H13 A1ACX 45
A1ACX H14 H14 H 0 1 N N N N N N 131.248 109.764 93.069 -11.857 -0.612 1.144 H14 A1ACX 46
A1ACX H15 H15 H 0 1 N N N N N N 133.024 109.497 93.027 -11.888 -1.050 -0.581 H15 A1ACX 47
A1ACX H16 H16 H 0 1 N N N N N N 132.032 110.456 90.449 -10.592 0.993 -1.123 H16 A1ACX 48
A1ACX H17 H17 H 0 1 N N N N N N 131.166 108.972 90.972 -10.560 1.431 0.602 H17 A1ACX 49
A1ACX H18 H18 H 0 1 N N N N N N 133.414 107.919 91.433 -9.359 -0.677 1.115 H18 A1ACX 50
A1ACX H19 H19 H 0 1 N N N N N N 134.180 109.364 90.690 -9.391 -1.114 -0.610 H19 A1ACX 51
A1ACX H20 H20 H 0 1 N N N N N N 132.167 108.442 88.883 -8.063 1.367 0.573 H20 A1ACX 52
A1ACX H21 H21 H 0 1 N N N N N N 133.105 107.006 89.418 -8.094 0.929 -1.152 H21 A1ACX 53
A1ACX H22 H22 H 0 1 N N N N N N 133.522 106.807 87.255 -5.597 0.864 -1.181 H22 A1ACX 54
A1ACX H23 H23 H 0 1 N N N N N N 135.284 107.110 87.089 -5.565 1.302 0.544 H23 A1ACX 55
A1ACX H24 H24 H 0 1 N N N N N N 134.889 109.012 85.648 -4.364 -0.806 1.057 H24 A1ACX 56
A1ACX H25 H25 H 0 1 N N N N N N 133.119 108.933 85.946 -4.396 -1.244 -0.668 H25 A1ACX 57
A1ACX H26 H26 H 0 1 N N N N N N 133.511 106.417 85.045 -3.099 0.799 -1.210 H26 A1ACX 58
A1ACX H27 H27 H 0 1 N N N N N N 134.868 107.233 84.199 -3.068 1.237 0.515 H27 A1ACX 59
A1ACX H28 H28 H 0 1 N N N N N N 133.424 108.662 83.004 -1.867 -0.871 1.028 H28 A1ACX 60
A1ACX H29 H29 H 0 1 N N N N N N 132.049 108.356 84.119 -1.898 -1.309 -0.697 H29 A1ACX 61
A1ACX H30 H30 H 0 1 N N N N N N 131.496 106.362 83.120 -0.602 0.734 -1.239 H30 A1ACX 62
A1ACX H31 H31 H 0 1 N N N N N N 133.188 106.009 82.630 -0.570 1.172 0.486 H31 A1ACX 63
A1ACX H32 H32 H 0 1 N N N N N N 130.486 107.446 79.281 2.899 -1.746 -0.673 H32 A1ACX 64
A1ACX H33 H33 H 0 1 N N N N N N 129.929 106.117 80.354 2.930 -1.309 1.052 H33 A1ACX 65
A1ACX H34 H34 H 0 1 N N N N N N 131.499 105.787 77.741 4.304 0.228 -1.199 H34 A1ACX 66
A1ACX H35 H35 H 0 1 N N N N N N 129.741 105.483 77.955 4.335 0.665 0.526 H35 A1ACX 67
A1ACX H36 H36 H 0 1 N N N N N N 130.278 103.714 79.637 5.421 -1.500 1.056 H36 A1ACX 68
A1ACX H37 H37 H 0 1 N N N N N N 132.028 103.992 79.343 5.390 -1.938 -0.669 H37 A1ACX 69
A1ACX H38 H38 H 0 1 N N N N N N 133.577 104.519 75.047 10.789 -1.185 -1.243 H38 A1ACX 70
A1ACX H39 H39 H 0 1 N N N N N N 132.154 104.717 76.125 10.996 -0.723 0.463 H39 A1ACX 71
A1ACX H40 H40 H 0 1 N N N N N N 131.302 102.492 75.048 12.497 0.551 -1.115 H40 A1ACX 72
A1ACX H41 H41 H 0 1 N N N N N N 132.529 102.810 73.776 11.040 1.246 -1.866 H41 A1ACX 73
A1ACX H42 H42 H 0 1 N N N N N N 130.751 105.380 75.604 10.010 3.231 0.883 H42 A1ACX 74
A1ACX H43 H43 H 0 1 N N N N N N 129.440 105.535 74.386 9.627 2.600 -0.737 H43 A1ACX 75
A1ACX H44 H44 H 0 1 N N N N N N 129.544 104.064 75.412 9.405 1.568 0.696 H44 A1ACX 76
A1ACX H45 H45 H 0 1 N N N N N N 129.566 102.708 73.470 11.799 2.030 2.167 H45 A1ACX 77
A1ACX H46 H46 H 0 1 N N N N N N 129.454 104.182 72.450 11.187 0.441 1.645 H46 A1ACX 78
A1ACX H47 H47 H 0 1 N N N N N N 130.783 103.004 72.183 12.865 0.912 1.282 H47 A1ACX 79
A1ACX H48 H48 H 0 1 N N N N N N 132.363 105.766 73.897 13.307 2.620 -0.343 H48 A1ACX 80
A1ACX H49 H49 H 0 1 N N N N N N 132.369 104.737 72.425 11.957 3.416 -1.187 H49 A1ACX 81
A1ACX H50 H50 H 0 1 N N N N N N 131.039 105.915 72.692 12.240 3.737 0.541 H50 A1ACX 82
A1ACX H51 H51 H 0 1 N N N N N N 133.020 101.037 78.925 8.315 -0.813 2.148 H51 A1ACX 83
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
A1ACX C31 N29 SING N N 1
A1ACX C32 N29 SING N N 2
A1ACX N29 C28 SING N N 3
A1ACX N29 C30 SING N N 4
A1ACX C28 C27 SING N N 5
A1ACX C27 O26 SING N N 6
A1ACX O26 P23 SING N N 7
A1ACX O25 P23 DOUB N N 8
A1ACX P23 O22 SING N N 9
A1ACX P23 O24 SING N N 10
A1ACX O22 C21 SING N N 11
A1ACX C20 C21 SING N N 12
A1ACX C20 C19 SING N N 13
A1ACX C19 O18 SING N N 14
A1ACX O18 C16 SING N N 15
A1ACX O17 C16 DOUB N N 16
A1ACX C16 C15 SING N N 17
A1ACX C15 C14 SING N N 18
A1ACX C14 C13 SING N N 19
A1ACX C13 C12 SING N N 20
A1ACX C12 C11 SING N N 21
A1ACX C11 C10 SING N N 22
A1ACX C10 C09 SING N N 23
A1ACX C09 C08 SING N N 24
A1ACX C08 C07 SING N N 25
A1ACX C07 C06 SING N N 26
A1ACX C06 C05 SING N N 27
A1ACX C05 C04 SING N N 28
A1ACX C03 C04 SING N N 29
A1ACX C03 C02 SING N N 30
A1ACX C01 C02 SING N N 31
A1ACX C10 H1 SING N N 32
A1ACX C10 H2 SING N N 33
A1ACX C01 H3 SING N N 34
A1ACX C01 H4 SING N N 35
A1ACX C01 H5 SING N N 36
A1ACX C02 H6 SING N N 37
A1ACX C02 H7 SING N N 38
A1ACX C03 H8 SING N N 39
A1ACX C03 H9 SING N N 40
A1ACX C04 H10 SING N N 41
A1ACX C04 H11 SING N N 42
A1ACX C05 H12 SING N N 43
A1ACX C05 H13 SING N N 44
A1ACX C06 H14 SING N N 45
A1ACX C06 H15 SING N N 46
A1ACX C07 H16 SING N N 47
A1ACX C07 H17 SING N N 48
A1ACX C08 H18 SING N N 49
A1ACX C08 H19 SING N N 50
A1ACX C09 H20 SING N N 51
A1ACX C09 H21 SING N N 52
A1ACX C11 H22 SING N N 53
A1ACX C11 H23 SING N N 54
A1ACX C12 H24 SING N N 55
A1ACX C12 H25 SING N N 56
A1ACX C13 H26 SING N N 57
A1ACX C13 H27 SING N N 58
A1ACX C14 H28 SING N N 59
A1ACX C14 H29 SING N N 60
A1ACX C15 H30 SING N N 61
A1ACX C15 H31 SING N N 62
A1ACX C19 H32 SING N N 63
A1ACX C19 H33 SING N N 64
A1ACX C20 H34 SING N N 65
A1ACX C20 H35 SING N N 66
A1ACX C21 H36 SING N N 67
A1ACX C21 H37 SING N N 68
A1ACX C27 H38 SING N N 69
A1ACX C27 H39 SING N N 70
A1ACX C28 H40 SING N N 71
A1ACX C28 H41 SING N N 72
A1ACX C30 H42 SING N N 73
A1ACX C30 H43 SING N N 74
A1ACX C30 H44 SING N N 75
A1ACX C31 H45 SING N N 76
A1ACX C31 H46 SING N N 77
A1ACX C31 H47 SING N N 78
A1ACX C32 H48 SING N N 79
A1ACX C32 H49 SING N N 80
A1ACX C32 H50 SING N N 81
A1ACX O24 H51 SING N N 82
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
A1ACX SMILES ACDLabs 12.01 "C[N+](C)(C)CCOP(O)(=O)OCCCOC(=O)CCCCCCCCCCCCCCC"
A1ACX InChI InChI 1.06 "InChI=1S/C24H50NO6P/c1-5-6-7-8-9-10-11-12-13-14-15-16-17-19-24(26)29-21-18-22-30-32(27,28)31-23-20-25(2,3)4/h5-23H2,1-4H3/p+1"
A1ACX InChIKey InChI 1.06 RADDWOTUVGBPAO-UHFFFAOYSA-O
A1ACX SMILES_CANONICAL CACTVS 3.385 "CCCCCCCCCCCCCCCC(=O)OCCCO[P](O)(=O)OCC[N+](C)(C)C"
A1ACX SMILES CACTVS 3.385 "CCCCCCCCCCCCCCCC(=O)OCCCO[P](O)(=O)OCC[N+](C)(C)C"
A1ACX SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCCCCCCCCCCCCCC(=O)OCCCOP(=O)(O)OCC[N+](C)(C)C"
A1ACX SMILES "OpenEye OEToolkits" 2.0.7 "CCCCCCCCCCCCCCCC(=O)OCCCOP(=O)(O)OCC[N+](C)(C)C"
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
A1ACX "SYSTEMATIC NAME" ACDLabs 12.01 "(4S)-4-hydroxy-N,N,N-trimethyl-4,10-dioxo-3,5,9-trioxa-4lambda~5~-phosphapentacosan-1-aminium"
A1ACX "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-[3-hexadecanoyloxypropoxy(oxidanyl)phosphoryl]oxyethyl-trimethyl-azanium"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
A1ACX "Create component" 2024-01-17 RCSB
A1ACX "Initial release" 2024-10-30 RCSB
#