data_A1AD3 # _chem_comp.id A1AD3 _chem_comp.name "(1M)-5-amino-1-(1,8-naphthyridin-3-yl)-1H-imidazole-4-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H10 N6 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-02-02 _chem_comp.pdbx_modified_date 2025-06-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 254.247 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1AD3 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8VVJ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1AD3 C02 C1 C 0 1 N N N N N N 85.719 -5.469 18.291 -4.477 0.127 0.253 C02 A1AD3 1 A1AD3 C04 C2 C 0 1 Y N N N N N 85.385 -5.102 16.966 -3.117 -0.314 -0.066 C04 A1AD3 2 A1AD3 C06 C3 C 0 1 Y N N N N N 85.336 -5.384 14.796 -1.474 -1.550 -0.758 C06 A1AD3 3 A1AD3 C08 C4 C 0 1 Y N N N N N 84.210 -3.347 14.017 0.438 -0.062 -0.280 C08 A1AD3 4 A1AD3 C09 C5 C 0 1 Y N N N N N 84.426 -1.927 14.029 0.878 1.161 -0.799 C09 A1AD3 5 A1AD3 C11 C6 C 0 1 Y N N N N N 83.420 -1.709 11.933 3.084 0.681 -0.302 C11 A1AD3 6 A1AD3 C13 C7 C 0 1 Y N N N N N 82.420 -1.301 9.849 5.304 0.254 0.171 C13 A1AD3 7 A1AD3 C14 C8 C 0 1 Y N N N N N 82.128 -2.681 9.657 5.005 -0.991 0.718 C14 A1AD3 8 A1AD3 C15 C9 C 0 1 Y N N N N N 82.499 -3.564 10.652 3.708 -1.416 0.770 C15 A1AD3 9 A1AD3 C16 C10 C 0 1 Y N N N N N 83.166 -3.070 11.831 2.711 -0.570 0.251 C16 A1AD3 10 A1AD3 C17 C11 C 0 1 Y N N N N N 83.596 -3.907 12.913 1.357 -0.946 0.254 C17 A1AD3 11 A1AD3 C18 C12 C 0 1 Y N N N N N 84.754 -3.976 16.444 -1.949 0.404 0.146 C18 A1AD3 12 A1AD3 N01 N1 N 0 1 N N N N N N 86.550 -6.548 18.599 -5.525 -0.679 -0.008 N01 A1AD3 13 A1AD3 N05 N2 N 0 1 Y N N N N N 85.741 -5.955 15.910 -2.765 -1.507 -0.619 N05 A1AD3 14 A1AD3 N07 N3 N 0 1 Y N N N N N 84.682 -4.135 15.054 -0.926 -0.387 -0.296 N07 A1AD3 15 A1AD3 N10 N4 N 0 1 Y N N N N N 84.052 -1.138 13.039 2.145 1.493 -0.798 N10 A1AD3 16 A1AD3 N12 N5 N 0 1 Y N N N N N 83.039 -0.800 10.933 4.372 1.040 -0.312 N12 A1AD3 17 A1AD3 N19 N6 N 0 1 N N N N N N 84.238 -2.872 17.088 -1.842 1.666 0.694 N19 A1AD3 18 A1AD3 O03 O1 O 0 1 N N N N N N 85.299 -4.797 19.240 -4.660 1.219 0.759 O03 A1AD3 19 A1AD3 H1 H1 H 0 1 N N N N N N 85.478 -5.804 13.811 -0.919 -2.379 -1.173 H1 A1AD3 20 A1AD3 H2 H2 H 0 1 N N N N N N 84.915 -1.486 14.885 0.154 1.848 -1.210 H2 A1AD3 21 A1AD3 H3 H3 H 0 1 N N N N N N 82.125 -0.610 9.073 6.333 0.583 0.144 H3 A1AD3 22 A1AD3 H4 H4 H 0 1 N N N N N N 81.632 -3.026 8.762 5.796 -1.615 1.109 H4 A1AD3 23 A1AD3 H5 H5 H 0 1 N N N N N N 82.291 -4.619 10.548 3.455 -2.378 1.191 H5 A1AD3 24 A1AD3 H6 H6 H 0 1 N N N N N N 83.440 -4.975 12.865 1.043 -1.896 0.660 H6 A1AD3 25 A1AD3 H7 H7 H 0 1 N N N N N N 86.779 -6.746 19.552 -6.426 -0.389 0.207 H7 A1AD3 26 A1AD3 H8 H8 H 0 1 N N N N N N 86.916 -7.122 17.867 -5.380 -1.549 -0.411 H8 A1AD3 27 A1AD3 H9 H9 H 0 1 N N N N N N 84.394 -2.956 18.072 -2.638 2.141 0.977 H9 A1AD3 28 A1AD3 H10 H10 H 0 1 N N N N N N 84.690 -2.047 16.749 -0.969 2.078 0.796 H10 A1AD3 29 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1AD3 C14 C13 DOUB Y N 1 A1AD3 C14 C15 SING Y N 2 A1AD3 C13 N12 SING Y N 3 A1AD3 C15 C16 DOUB Y N 4 A1AD3 N12 C11 DOUB Y N 5 A1AD3 C16 C11 SING Y N 6 A1AD3 C16 C17 SING Y N 7 A1AD3 C11 N10 SING Y N 8 A1AD3 C17 C08 DOUB Y N 9 A1AD3 N10 C09 DOUB Y N 10 A1AD3 C08 C09 SING Y N 11 A1AD3 C08 N07 SING N N 12 A1AD3 C06 N07 SING Y N 13 A1AD3 C06 N05 DOUB Y N 14 A1AD3 N07 C18 SING Y N 15 A1AD3 N05 C04 SING Y N 16 A1AD3 C18 C04 DOUB Y N 17 A1AD3 C18 N19 SING N N 18 A1AD3 C04 C02 SING N N 19 A1AD3 C02 N01 SING N N 20 A1AD3 C02 O03 DOUB N N 21 A1AD3 C06 H1 SING N N 22 A1AD3 C09 H2 SING N N 23 A1AD3 C13 H3 SING N N 24 A1AD3 C14 H4 SING N N 25 A1AD3 C15 H5 SING N N 26 A1AD3 C17 H6 SING N N 27 A1AD3 N01 H7 SING N N 28 A1AD3 N01 H8 SING N N 29 A1AD3 N19 H9 SING N N 30 A1AD3 N19 H10 SING N N 31 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1AD3 SMILES ACDLabs 12.01 "NC(=O)c1ncn(c2cnc3ncccc3c2)c1N" A1AD3 InChI InChI 1.06 "InChI=1S/C12H10N6O/c13-10-9(11(14)19)17-6-18(10)8-4-7-2-1-3-15-12(7)16-5-8/h1-6H,13H2,(H2,14,19)" A1AD3 InChIKey InChI 1.06 XEVIHIZMGQWKDF-UHFFFAOYSA-N A1AD3 SMILES_CANONICAL CACTVS 3.385 "NC(=O)c1ncn(c2cnc3ncccc3c2)c1N" A1AD3 SMILES CACTVS 3.385 "NC(=O)c1ncn(c2cnc3ncccc3c2)c1N" A1AD3 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc2cc(cnc2nc1)n3cnc(c3N)C(=O)N" A1AD3 SMILES "OpenEye OEToolkits" 2.0.7 "c1cc2cc(cnc2nc1)n3cnc(c3N)C(=O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1AD3 "SYSTEMATIC NAME" ACDLabs 12.01 "(1M)-5-amino-1-(1,8-naphthyridin-3-yl)-1H-imidazole-4-carboxamide" A1AD3 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "5-azanyl-1-(1,8-naphthyridin-3-yl)imidazole-4-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1AD3 "Create component" 2024-02-02 RCSB A1AD3 "Initial release" 2025-06-11 RCSB #