data_A1ADM # _chem_comp.id A1ADM _chem_comp.name "N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-1-(1H-indole-2-carbonyl)-4,4-dimethyl-L-prolinamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C23 H30 N4 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-01-22 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 426.509 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1ADM _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8VQX _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1ADM N1 N1 N 0 1 Y N N N N N 9.591 -4.145 23.014 3.882 -0.067 0.189 N1 A1ADM 1 A1ADM C5 C1 C 0 1 Y N N N N N 10.679 -3.062 24.620 3.413 2.030 -0.417 C5 A1ADM 2 A1ADM C6 C2 C 0 1 Y N N N N N 11.538 -6.653 25.629 7.036 2.582 0.466 C6 A1ADM 3 A1ADM C7 C3 C 0 1 Y N N N N N 10.861 -7.286 24.589 7.306 1.271 0.839 C7 A1ADM 4 A1ADM C8 C4 C 0 1 Y N N N N N 11.567 -5.257 25.757 5.791 2.940 0.038 C8 A1ADM 5 A1ADM C10 C5 C 0 1 Y N N N N N 10.870 -4.463 24.809 4.773 1.980 -0.028 C10 A1ADM 6 A1ADM N12 N2 N 0 1 N N N N N N 9.470 -0.498 23.389 1.146 -0.903 -0.522 N12 A1ADM 7 A1ADM C13 C6 C 0 1 N N S N N N 9.017 0.706 22.649 -0.222 -1.417 -0.684 C13 A1ADM 8 A1ADM C17 C7 C 0 1 N N N N N N 9.564 -0.264 24.842 2.055 -2.042 -0.299 C17 A1ADM 9 A1ADM C20 C8 C 0 1 N N N N N N 9.602 1.847 26.221 1.791 -4.566 -0.285 C20 A1ADM 10 A1ADM C22 C9 C 0 1 N N S N N N 9.807 1.831 19.113 -3.306 -0.359 1.322 C22 A1ADM 11 A1ADM C26 C10 C 0 1 N N N N N N 9.209 -1.144 16.751 -5.782 1.526 -0.933 C26 A1ADM 12 A1ADM C28 C11 C 0 1 N N N N N N 11.494 -1.699 16.805 -4.832 3.558 -0.329 C28 A1ADM 13 A1ADM C2 C12 C 0 1 Y N N N N N 9.876 -2.893 23.495 2.897 0.781 -0.278 C2 A1ADM 14 A1ADM C3 C13 C 0 1 N N N N N N 9.384 -1.723 22.806 1.510 0.393 -0.576 C3 A1ADM 15 A1ADM O4 O1 O 0 1 N N N N N N 9.020 -1.822 21.640 0.691 1.243 -0.871 O4 A1ADM 16 A1ADM C9 C14 C 0 1 Y N N N N N 10.167 -6.520 23.637 6.322 0.309 0.783 C9 A1ADM 17 A1ADM C11 C15 C 0 1 Y N N N N N 10.187 -5.126 23.790 5.044 0.650 0.350 C11 A1ADM 18 A1ADM C14 C16 C 0 1 N N N N N N 9.858 0.923 21.418 -1.107 -0.870 0.407 C14 A1ADM 19 A1ADM O15 O2 O 0 1 N N N N N N 11.054 0.639 21.365 -0.613 -0.412 1.416 O15 A1ADM 20 A1ADM C16 C17 C 0 1 N N N N N N 9.225 1.833 23.676 -0.150 -2.955 -0.580 C16 A1ADM 21 A1ADM C18 C18 C 0 1 N N N N N N 8.949 1.136 25.040 1.331 -3.257 -0.931 C18 A1ADM 22 A1ADM C19 C19 C 0 1 N N N N N N 7.459 1.019 25.243 1.540 -3.293 -2.446 C19 A1ADM 23 A1ADM N21 N3 N 0 1 N N N N N N 9.164 1.458 20.361 -2.447 -0.891 0.262 N21 A1ADM 24 A1ADM C23 C20 C 0 1 N N N N N N 9.418 3.261 18.861 -3.510 -1.429 2.397 C23 A1ADM 25 A1ADM O24 O3 O 0 1 N N N N N N 10.137 3.935 17.823 -4.231 -2.531 1.842 O24 A1ADM 26 A1ADM C25 C21 C 0 1 N N N N N N 9.307 1.071 17.902 -4.662 0.034 0.731 C25 A1ADM 27 A1ADM C27 C22 C 0 1 N N N N N N 11.294 -0.478 17.695 -4.087 2.484 0.495 C27 A1ADM 28 A1ADM C29 C23 C 0 1 N N S N N N 9.776 -0.365 17.928 -4.472 1.188 -0.256 C29 A1ADM 29 A1ADM N30 N4 N 0 1 N N N N N N 10.225 -1.816 16.113 -5.960 2.859 -0.955 N30 A1ADM 30 A1ADM O31 O4 O 0 1 N N N N N N 8.026 -1.191 16.420 -6.556 0.714 -1.394 O31 A1ADM 31 A1ADM H1 H1 H 0 1 N N N N N N 9.027 -4.326 22.209 3.772 -1.013 0.377 H1 A1ADM 32 A1ADM H2 H2 H 0 1 N N N N N N 11.084 -2.274 25.238 2.881 2.904 -0.764 H2 A1ADM 33 A1ADM H3 H3 H 0 1 N N N N N N 12.057 -7.256 26.359 7.819 3.324 0.516 H3 A1ADM 34 A1ADM H4 H4 H 0 1 N N N N N N 10.870 -8.363 24.515 8.297 1.004 1.175 H4 A1ADM 35 A1ADM H5 H5 H 0 1 N N N N N N 12.112 -4.792 26.565 5.591 3.962 -0.249 H5 A1ADM 36 A1ADM H6 H6 H 0 1 N N N N N N 7.953 0.627 22.382 -0.613 -1.129 -1.660 H6 A1ADM 37 A1ADM H7 H7 H 0 1 N N N N N N 8.993 -1.023 25.397 3.010 -1.869 -0.795 H7 A1ADM 38 A1ADM H8 H8 H 0 1 N N N N N N 10.613 -0.280 25.173 2.205 -2.203 0.769 H8 A1ADM 39 A1ADM H9 H9 H 0 1 N N N N N N 9.369 1.306 27.150 1.592 -4.532 0.786 H9 A1ADM 40 A1ADM H10 H10 H 0 1 N N N N N N 10.692 1.873 26.076 1.248 -5.400 -0.730 H10 A1ADM 41 A1ADM H11 H11 H 0 1 N N N N N N 9.216 2.875 26.289 2.860 -4.697 -0.452 H11 A1ADM 42 A1ADM H12 H12 H 0 1 N N N N N N 10.901 1.742 19.191 -2.836 0.517 1.766 H12 A1ADM 43 A1ADM H13 H13 H 0 1 N N N N N N 11.699 -2.597 17.407 -5.196 4.350 0.326 H13 A1ADM 44 A1ADM H14 H14 H 0 1 N N N N N N 12.318 -1.538 16.094 -4.173 3.972 -1.092 H14 A1ADM 45 A1ADM H15 H15 H 0 1 N N N N N N 9.639 -6.987 22.819 6.542 -0.708 1.074 H15 A1ADM 46 A1ADM H16 H16 H 0 1 N N N N N N 10.254 2.219 23.633 -0.381 -3.284 0.433 H16 A1ADM 47 A1ADM H17 H17 H 0 1 N N N N N N 8.516 2.657 23.505 -0.820 -3.422 -1.301 H17 A1ADM 48 A1ADM H18 H18 H 0 1 N N N N N N 7.257 0.527 26.206 2.603 -3.394 -2.664 H18 A1ADM 49 A1ADM H19 H19 H 0 1 N N N N N N 7.009 2.023 25.243 1.000 -4.141 -2.867 H19 A1ADM 50 A1ADM H20 H20 H 0 1 N N N N N N 7.024 0.422 24.428 1.165 -2.368 -2.886 H20 A1ADM 51 A1ADM H21 H21 H 0 1 N N N N N N 8.178 1.596 20.454 -2.841 -1.257 -0.545 H21 A1ADM 52 A1ADM H22 H22 H 0 1 N Y N N N N 9.572 3.821 19.795 -2.540 -1.773 2.756 H22 A1ADM 53 A1ADM H23 H23 H 0 1 N N N N N N 8.351 3.277 18.596 -4.076 -1.006 3.227 H23 A1ADM 54 A1ADM H24 H24 H 0 1 N N N N N N 9.818 4.826 17.744 -4.397 -3.248 2.469 H24 A1ADM 55 A1ADM H25 H25 H 0 1 N N N N N N 9.687 1.557 16.991 -5.093 -0.821 0.211 H25 A1ADM 56 A1ADM H26 H26 H 0 1 N N N N N N 8.207 1.089 17.895 -5.331 0.347 1.532 H26 A1ADM 57 A1ADM H27 H27 H 0 1 N N N N N N 11.818 -0.613 18.652 -3.010 2.647 0.465 H27 A1ADM 58 A1ADM H28 H28 H 0 1 N N N N N N 11.672 0.426 17.194 -4.448 2.461 1.523 H28 A1ADM 59 A1ADM H29 H29 H 0 1 N N N N N N 9.500 -0.846 18.878 -3.714 0.934 -0.997 H29 A1ADM 60 A1ADM H30 H30 H 0 1 N N N N N N 10.102 -2.330 15.264 -6.735 3.301 -1.336 H30 A1ADM 61 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1ADM N30 C26 SING N N 1 A1ADM N30 C28 SING N N 2 A1ADM O31 C26 DOUB N N 3 A1ADM C26 C29 SING N N 4 A1ADM C28 C27 SING N N 5 A1ADM C27 C29 SING N N 6 A1ADM O24 C23 SING N N 7 A1ADM C25 C29 SING N N 8 A1ADM C25 C22 SING N N 9 A1ADM C23 C22 SING N N 10 A1ADM C22 N21 SING N N 11 A1ADM N21 C14 SING N N 12 A1ADM O15 C14 DOUB N N 13 A1ADM C14 C13 SING N N 14 A1ADM O4 C3 DOUB N N 15 A1ADM C13 N12 SING N N 16 A1ADM C13 C16 SING N N 17 A1ADM C3 N12 SING N N 18 A1ADM C3 C2 SING N N 19 A1ADM N1 C2 SING Y N 20 A1ADM N1 C11 SING Y N 21 A1ADM N12 C17 SING N N 22 A1ADM C2 C5 DOUB Y N 23 A1ADM C9 C11 DOUB Y N 24 A1ADM C9 C7 SING Y N 25 A1ADM C16 C18 SING N N 26 A1ADM C11 C10 SING Y N 27 A1ADM C7 C6 DOUB Y N 28 A1ADM C5 C10 SING Y N 29 A1ADM C10 C8 DOUB Y N 30 A1ADM C17 C18 SING N N 31 A1ADM C18 C19 SING N N 32 A1ADM C18 C20 SING N N 33 A1ADM C6 C8 SING Y N 34 A1ADM N1 H1 SING N N 35 A1ADM C5 H2 SING N N 36 A1ADM C6 H3 SING N N 37 A1ADM C7 H4 SING N N 38 A1ADM C8 H5 SING N N 39 A1ADM C13 H6 SING N N 40 A1ADM C17 H7 SING N N 41 A1ADM C17 H8 SING N N 42 A1ADM C20 H9 SING N N 43 A1ADM C20 H10 SING N N 44 A1ADM C20 H11 SING N N 45 A1ADM C22 H12 SING N N 46 A1ADM C28 H13 SING N N 47 A1ADM C28 H14 SING N N 48 A1ADM C9 H15 SING N N 49 A1ADM C16 H16 SING N N 50 A1ADM C16 H17 SING N N 51 A1ADM C19 H18 SING N N 52 A1ADM C19 H19 SING N N 53 A1ADM C19 H20 SING N N 54 A1ADM N21 H21 SING N N 55 A1ADM C23 H22 SING N N 56 A1ADM C23 H23 SING N N 57 A1ADM O24 H24 SING N N 58 A1ADM C25 H25 SING N N 59 A1ADM C25 H26 SING N N 60 A1ADM C27 H27 SING N N 61 A1ADM C27 H28 SING N N 62 A1ADM C29 H29 SING N N 63 A1ADM N30 H30 SING N N 64 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1ADM SMILES ACDLabs 12.01 "CC1(C)CC(C(=O)NC(CC2CCNC2=O)CO)N(C1)C(=O)c1cc2ccccc2[NH]1" A1ADM InChI InChI 1.06 "InChI=1S/C23H30N4O4/c1-23(2)11-19(21(30)25-16(12-28)9-15-7-8-24-20(15)29)27(13-23)22(31)18-10-14-5-3-4-6-17(14)26-18/h3-6,10,15-16,19,26,28H,7-9,11-13H2,1-2H3,(H,24,29)(H,25,30)/t15-,16-,19-/m0/s1" A1ADM InChIKey InChI 1.06 VFSCZUUJUPXSPK-BXWFABGCSA-N A1ADM SMILES_CANONICAL CACTVS 3.385 "CC1(C)C[C@H](N(C1)C(=O)c2[nH]c3ccccc3c2)C(=O)N[C@H](CO)C[C@@H]4CCNC4=O" A1ADM SMILES CACTVS 3.385 "CC1(C)C[CH](N(C1)C(=O)c2[nH]c3ccccc3c2)C(=O)N[CH](CO)C[CH]4CCNC4=O" A1ADM SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1(C[C@H](N(C1)C(=O)c2cc3ccccc3[nH]2)C(=O)N[C@@H](C[C@@H]4CCNC4=O)CO)C" A1ADM SMILES "OpenEye OEToolkits" 2.0.7 "CC1(CC(N(C1)C(=O)c2cc3ccccc3[nH]2)C(=O)NC(CC4CCNC4=O)CO)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1ADM "SYSTEMATIC NAME" ACDLabs 12.01 "N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-1-(1H-indole-2-carbonyl)-4,4-dimethyl-L-prolinamide" A1ADM "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{S})-1-(1~{H}-indol-2-ylcarbonyl)-4,4-dimethyl-~{N}-[(2~{S})-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]pyrrolidine-2-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1ADM "Create component" 2024-01-22 RCSB A1ADM "Initial release" 2024-08-07 RCSB A1ADM "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id A1ADM _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C23 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #