data_A1ADO # _chem_comp.id A1ADO _chem_comp.name "(4R)-5-fluoro-L-leucine" _chem_comp.type "L-peptide linking" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C6 H12 F N O2" _chem_comp.mon_nstd_parent_comp_id LEU _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-01-23 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 149.163 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1ADO _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8VRH _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1ADO N N1 N 0 1 N N N Y Y N 30.726 9.362 22.541 -0.891 -1.280 1.260 N A1ADO 1 A1ADO CA C1 C 0 1 N N S N Y N 30.054 9.800 21.304 -0.867 -0.057 0.447 CA A1ADO 2 A1ADO C C2 C 0 1 N N N N Y Y 30.990 10.609 20.394 -2.263 0.260 -0.024 C A1ADO 3 A1ADO O O1 O 0 1 N N N N Y Y 30.748 10.934 19.219 -3.106 -0.605 -0.039 O A1ADO 4 A1ADO CB C3 C 0 1 N N N N N N 28.860 10.665 21.620 0.045 -0.267 -0.763 CB A1ADO 5 A1ADO CG C4 C 0 1 N N R N N N 27.718 9.936 22.284 1.487 -0.460 -0.289 CG A1ADO 6 A1ADO CD1 C5 C 0 1 N N N N N N 26.606 10.965 22.563 2.374 -0.813 -1.484 CD1 A1ADO 7 A1ADO CD2 C6 C 0 1 N N N N N N 27.220 8.840 21.315 1.989 0.834 0.355 CD2 A1ADO 8 A1ADO F2 F1 F 0 1 N N N N N N 26.414 7.938 21.945 3.307 0.658 0.789 F2 A1ADO 9 A1ADO OXT O2 O 0 1 N Y N N Y Y 32.167 10.962 20.912 -2.569 1.503 -0.428 OXT A1ADO 10 A1ADO H H1 H 0 1 N N N Y Y N 30.084 8.841 23.103 -1.146 -2.081 0.702 H A1ADO 11 A1ADO H2 H2 H 0 1 N Y N Y Y N 31.509 8.786 22.308 -0.004 -1.427 1.719 H2 A1ADO 12 A1ADO HA H4 H 0 1 N N N N Y N 29.711 8.915 20.748 -0.489 0.771 1.047 HA A1ADO 13 A1ADO HB2 H5 H 0 1 N N N N N N 29.189 11.473 22.291 -0.278 -1.152 -1.312 HB2 A1ADO 14 A1ADO HB3 H6 H 0 1 N N N N N N 28.490 11.098 20.679 -0.010 0.605 -1.415 HB3 A1ADO 15 A1ADO HG H7 H 0 1 N N N N N N 28.052 9.479 23.227 1.523 -1.268 0.442 HG A1ADO 16 A1ADO HD11 H8 H 0 0 N N N N N N 26.982 11.734 23.254 3.385 -1.026 -1.136 HD11 A1ADO 17 A1ADO HD12 H9 H 0 0 N N N N N N 26.300 11.439 21.619 1.971 -1.692 -1.989 HD12 A1ADO 18 A1ADO HD13 H10 H 0 0 N N N N N N 25.742 10.457 23.016 2.398 0.026 -2.179 HD13 A1ADO 19 A1ADO HD21 H11 H 0 0 N N N N N N 28.090 8.311 20.898 1.952 1.641 -0.377 HD21 A1ADO 20 A1ADO HD22 H12 H 0 0 N N N N N N 26.654 9.315 20.500 1.357 1.086 1.206 HD22 A1ADO 21 A1ADO HXT H13 H 0 1 N Y N N Y Y 32.670 11.437 20.261 -3.477 1.658 -0.722 HXT A1ADO 22 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1ADO O C DOUB N N 1 A1ADO C CA SING N N 2 A1ADO CA CB SING N N 3 A1ADO CA N SING N N 4 A1ADO CD2 F2 SING N N 5 A1ADO CD2 CG SING N N 6 A1ADO CB CG SING N N 7 A1ADO CG CD1 SING N N 8 A1ADO C OXT SING N N 9 A1ADO N H SING N N 10 A1ADO N H2 SING N N 11 A1ADO CA HA SING N N 12 A1ADO CB HB2 SING N N 13 A1ADO CB HB3 SING N N 14 A1ADO CG HG SING N N 15 A1ADO CD1 HD11 SING N N 16 A1ADO CD1 HD12 SING N N 17 A1ADO CD1 HD13 SING N N 18 A1ADO CD2 HD21 SING N N 19 A1ADO CD2 HD22 SING N N 20 A1ADO OXT HXT SING N N 21 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1ADO SMILES ACDLabs 12.01 "FCC(C)CC(N)C(=O)O" A1ADO InChI InChI 1.06 "InChI=1S/C6H12FNO2/c1-4(3-7)2-5(8)6(9)10/h4-5H,2-3,8H2,1H3,(H,9,10)/t4-,5+/m1/s1" A1ADO InChIKey InChI 1.06 FHOARJRQRXAPOF-UHNVWZDZSA-N A1ADO SMILES_CANONICAL CACTVS 3.385 "C[C@@H](CF)C[C@H](N)C(O)=O" A1ADO SMILES CACTVS 3.385 "C[CH](CF)C[CH](N)C(O)=O" A1ADO SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H](C[C@@H](C(=O)O)N)CF" A1ADO SMILES "OpenEye OEToolkits" 2.0.7 "CC(CC(C(=O)O)N)CF" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1ADO "SYSTEMATIC NAME" ACDLabs 12.01 "(4R)-5-fluoro-L-leucine" A1ADO "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{S},4~{R})-2-azanyl-5-fluoranyl-4-methyl-pentanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1ADO "Create component" 2024-01-23 RCSB A1ADO "Modify parent residue" 2024-01-23 RCSB A1ADO "Modify linking type" 2024-05-16 RCSB A1ADO "Modify leaving atom flag" 2024-05-16 RCSB A1ADO "Initial release" 2024-05-22 RCSB A1ADO "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id A1ADO _pdbx_chem_comp_pcm.modified_residue_id LEU _pdbx_chem_comp_pcm.type Fluorination _pdbx_chem_comp_pcm.category "Named protein modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom ? _pdbx_chem_comp_pcm.modified_residue_id_linking_atom ? _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? _pdbx_chem_comp_pcm.first_instance_model_db_code 8VRH #