data_A1AE3 # _chem_comp.id A1AE3 _chem_comp.name "[3-({3-methoxy-4-[(6-methoxypyridin-3-yl)methoxy]phenyl}methyl)-3H-imidazo[4,5-b]pyridin-6-yl](2-oxa-6-azaspiro[3.3]heptan-6-yl)methanone" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H27 N5 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-02-19 _chem_comp.pdbx_modified_date 2024-05-24 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 501.534 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1AE3 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8W1L _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1AE3 N1 N1 N 0 1 N N N N N N -16.431 43.315 -10.492 -6.201 -0.997 0.669 N1 A1AE3 1 A1AE3 N3 N2 N 0 1 Y N N N N N -22.144 42.318 -7.952 -1.555 2.942 -1.014 N3 A1AE3 2 A1AE3 C4 C1 C 0 1 N N N N N N -15.246 43.016 -13.807 -6.109 -3.849 -0.628 C4 A1AE3 3 A1AE3 C5 C2 C 0 1 N N N N N N -15.893 41.350 -12.810 -7.918 -3.317 -1.329 C5 A1AE3 4 A1AE3 C6 C3 C 0 1 N N N N N N -17.066 43.618 -11.775 -6.387 -1.194 -0.780 C6 A1AE3 5 A1AE3 C7 C4 C 0 1 Y N N N N N -18.309 43.015 -8.933 -4.365 0.614 0.830 C7 A1AE3 6 A1AE3 C8 C5 C 0 1 Y N N N N N -18.616 42.218 -7.801 -3.430 1.280 1.630 C8 A1AE3 7 A1AE3 C10 C6 C 0 1 Y N N N N N -20.644 43.253 -9.291 -3.310 1.582 -1.087 C10 A1AE3 8 A1AE3 C13 C7 C 0 1 N N N N N N -22.780 41.557 -6.870 -0.443 3.780 -0.560 C13 A1AE3 9 A1AE3 C15 C8 C 0 1 Y N N N N N -25.060 42.158 -5.971 1.660 2.738 -1.426 C15 A1AE3 10 A1AE3 C17 C9 C 0 1 Y N N N N N -25.362 43.920 -4.373 3.047 1.365 -0.034 C17 A1AE3 11 A1AE3 C20 C10 C 0 1 Y N N N N N -28.052 45.028 -1.180 6.109 -1.799 -0.804 C20 A1AE3 12 A1AE3 C21 C11 C 0 1 Y N N N N N -28.988 46.981 -0.460 8.250 -2.086 0.006 C21 A1AE3 13 A1AE3 C22 C12 C 0 1 N N N N N N -29.025 49.057 0.729 9.055 -4.319 0.096 C22 A1AE3 14 A1AE3 C24 C13 C 0 1 Y N N N N N -28.558 46.716 -2.772 7.346 0.124 -0.112 C24 A1AE3 15 A1AE3 C26 C14 C 0 1 N N N N N N -22.190 45.606 -3.780 1.456 1.199 3.269 C26 A1AE3 16 A1AE3 C1 C15 C 0 1 N N N N N N -16.856 43.195 -9.216 -5.402 -0.239 1.446 C1 A1AE3 17 A1AE3 C11 C16 C 0 1 Y N N N N N -20.798 42.455 -8.155 -2.408 2.218 -0.212 C11 A1AE3 18 A1AE3 C12 C17 C 0 1 Y N N N N N -22.744 43.034 -8.957 -1.938 2.742 -2.305 C12 A1AE3 19 A1AE3 C14 C18 C 0 1 Y N N N N N -23.696 42.399 -6.007 0.785 2.927 -0.373 C14 A1AE3 20 A1AE3 C16 C19 C 0 1 Y N N N N N -25.901 42.915 -5.160 2.788 1.956 -1.260 C16 A1AE3 21 A1AE3 C18 C20 C 0 1 N N N N N N -27.511 44.538 -3.555 5.018 0.448 -0.999 C18 A1AE3 22 A1AE3 C19 C21 C 0 1 Y N N N N N -28.047 45.452 -2.498 6.184 -0.432 -0.630 C19 A1AE3 23 A1AE3 C2 C22 C 0 1 N N N N N N -15.090 43.161 -11.059 -7.270 -1.985 0.898 C2 A1AE3 24 A1AE3 C23 C23 C 0 1 Y N N N N N -29.025 47.506 -1.747 8.398 -0.719 0.203 C23 A1AE3 25 A1AE3 C25 C24 C 0 1 Y N N N N N -23.973 44.160 -4.386 2.163 1.551 1.025 C25 A1AE3 26 A1AE3 C27 C25 C 0 1 Y N N N N N -23.154 43.400 -5.207 1.035 2.336 0.852 C27 A1AE3 27 A1AE3 C3 C26 C 0 1 N N N N N N -15.852 42.843 -12.377 -6.920 -2.578 -0.456 C3 A1AE3 28 A1AE3 C9 C27 C 0 1 Y N N N N N -19.340 43.539 -9.698 -4.308 0.765 -0.558 C9 A1AE3 29 A1AE3 N2 N3 N 0 1 Y N N N N N -19.840 41.938 -7.406 -2.502 2.044 1.098 N2 A1AE3 30 A1AE3 N4 N4 N 0 1 Y N N N N N -21.893 43.603 -9.782 -2.962 1.942 -2.350 N4 A1AE3 31 A1AE3 N5 N5 N 0 1 Y N N N N N -28.525 45.781 -0.166 7.125 -2.579 -0.485 N5 A1AE3 32 A1AE3 O1 O1 O 0 1 N N N N N N -16.038 43.146 -8.304 -5.535 -0.257 2.654 O1 A1AE3 33 A1AE3 O2 O2 O 0 1 N N N N N N -14.670 41.713 -13.509 -7.344 -4.547 -0.857 O2 A1AE3 34 A1AE3 O3 O3 O 0 1 N N N N N N -26.088 44.733 -3.558 4.156 0.595 0.131 O3 A1AE3 35 A1AE3 O4 O4 O 0 1 N N N N N N -29.462 47.697 0.597 9.269 -2.924 0.321 O4 A1AE3 36 A1AE3 O5 O5 O 0 1 N N N N N N -23.533 45.180 -3.582 2.406 0.964 2.227 O5 A1AE3 37 A1AE3 H3 H1 H 0 1 N N N N N N -15.971 43.040 -14.634 -5.454 -3.831 -1.499 H3 A1AE3 38 A1AE3 H4 H2 H 0 1 N N N N N N -14.528 43.841 -13.925 -5.595 -4.163 0.280 H4 A1AE3 39 A1AE3 H5 H3 H 0 1 N N N N N N -16.740 41.062 -13.450 -8.954 -3.175 -1.020 H5 A1AE3 40 A1AE3 H6 H4 H 0 1 N N N N N N -15.779 40.615 -12.000 -7.769 -3.149 -2.395 H6 A1AE3 41 A1AE3 H7 H5 H 0 1 N N N N N N -17.119 44.686 -12.034 -7.134 -0.531 -1.217 H7 A1AE3 42 A1AE3 H8 H6 H 0 1 N N N N N N -18.049 43.152 -11.936 -5.453 -1.206 -1.342 H8 A1AE3 43 A1AE3 H9 H7 H 0 1 N N N N N N -17.794 41.816 -7.227 -3.472 1.166 2.703 H9 A1AE3 44 A1AE3 H12 H8 H 0 1 N N N N N N -23.370 40.743 -7.315 -0.241 4.550 -1.304 H12 A1AE3 45 A1AE3 H13 H9 H 0 1 N N N N N N -21.992 41.132 -6.232 -0.706 4.251 0.387 H13 A1AE3 46 A1AE3 H14 H10 H 0 1 N N N N N N -25.477 41.371 -6.581 1.460 3.198 -2.382 H14 A1AE3 47 A1AE3 H18 H11 H 0 1 N N N N N N -27.659 44.048 -0.953 5.206 -2.237 -1.202 H18 A1AE3 48 A1AE3 H21 H12 H 0 1 N N N N N N -29.486 49.506 1.621 8.205 -4.656 0.689 H21 A1AE3 49 A1AE3 H20 H13 H 0 1 N N N N N N -27.930 49.082 0.830 8.851 -4.490 -0.961 H20 A1AE3 50 A1AE3 H19 H14 H 0 1 N N N N N N -29.324 49.626 -0.164 9.946 -4.875 0.389 H19 A1AE3 51 A1AE3 H23 H15 H 0 1 N N N N N N -28.588 47.077 -3.789 7.431 1.191 0.034 H23 A1AE3 52 A1AE3 H26 H16 H 0 1 N N N N N N -21.957 46.423 -3.081 1.397 2.268 3.472 H26 A1AE3 53 A1AE3 H25 H17 H 0 1 N N N N N N -21.507 44.763 -3.599 0.478 0.834 2.957 H25 A1AE3 54 A1AE3 H24 H18 H 0 1 N N N N N N -22.067 45.962 -4.814 1.769 0.674 4.171 H24 A1AE3 55 A1AE3 H11 H19 H 0 1 N N N N N N -23.815 43.122 -9.061 -1.461 3.185 -3.167 H11 A1AE3 56 A1AE3 H15 H20 H 0 1 N N N N N N -26.963 42.721 -5.144 3.468 1.806 -2.085 H15 A1AE3 57 A1AE3 H16 H21 H 0 1 N N N N N N -27.935 44.797 -4.536 5.384 1.428 -1.306 H16 A1AE3 58 A1AE3 H17 H22 H 0 1 N N N N N N -27.754 43.492 -3.316 4.465 -0.007 -1.821 H17 A1AE3 59 A1AE3 H1 H23 H 0 1 N N N N N N -14.479 44.075 -11.077 -7.070 -2.657 1.733 H1 A1AE3 60 A1AE3 H2 H24 H 0 1 N N N N N N -14.497 42.332 -10.646 -8.267 -1.546 0.937 H2 A1AE3 61 A1AE3 H22 H25 H 0 1 N N N N N N -29.407 48.499 -1.935 9.318 -0.320 0.604 H22 A1AE3 62 A1AE3 H27 H26 H 0 1 N N N N N N -22.090 43.586 -5.226 0.350 2.486 1.673 H27 A1AE3 63 A1AE3 H10 H27 H 0 1 N N N N N N -19.142 44.143 -10.571 -5.015 0.263 -1.201 H10 A1AE3 64 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1AE3 O1 C1 DOUB N N 1 A1AE3 C1 N1 SING N N 2 A1AE3 N1 C2 SING N N 3 A1AE3 C2 C3 SING N N 4 A1AE3 C3 C4 SING N N 5 A1AE3 C4 O2 SING N N 6 A1AE3 O2 C5 SING N N 7 A1AE3 C3 C6 SING N N 8 A1AE3 C1 C7 SING N N 9 A1AE3 C7 C8 DOUB Y N 10 A1AE3 C8 N2 SING Y N 11 A1AE3 C7 C9 SING Y N 12 A1AE3 C9 C10 DOUB Y N 13 A1AE3 C10 C11 SING Y N 14 A1AE3 C11 N3 SING Y N 15 A1AE3 N3 C12 SING Y N 16 A1AE3 C12 N4 DOUB Y N 17 A1AE3 N3 C13 SING N N 18 A1AE3 C13 C14 SING N N 19 A1AE3 C14 C15 DOUB Y N 20 A1AE3 C15 C16 SING Y N 21 A1AE3 C16 C17 DOUB Y N 22 A1AE3 C17 O3 SING N N 23 A1AE3 O3 C18 SING N N 24 A1AE3 C18 C19 SING N N 25 A1AE3 C19 C20 DOUB Y N 26 A1AE3 C20 N5 SING Y N 27 A1AE3 N5 C21 DOUB Y N 28 A1AE3 C21 O4 SING N N 29 A1AE3 O4 C22 SING N N 30 A1AE3 C21 C23 SING Y N 31 A1AE3 C23 C24 DOUB Y N 32 A1AE3 C17 C25 SING Y N 33 A1AE3 C25 O5 SING N N 34 A1AE3 O5 C26 SING N N 35 A1AE3 C25 C27 DOUB Y N 36 A1AE3 N1 C6 SING N N 37 A1AE3 C3 C5 SING N N 38 A1AE3 N2 C11 DOUB Y N 39 A1AE3 C10 N4 SING Y N 40 A1AE3 C14 C27 SING Y N 41 A1AE3 C19 C24 SING Y N 42 A1AE3 C4 H3 SING N N 43 A1AE3 C4 H4 SING N N 44 A1AE3 C5 H5 SING N N 45 A1AE3 C5 H6 SING N N 46 A1AE3 C6 H7 SING N N 47 A1AE3 C6 H8 SING N N 48 A1AE3 C8 H9 SING N N 49 A1AE3 C13 H12 SING N N 50 A1AE3 C13 H13 SING N N 51 A1AE3 C15 H14 SING N N 52 A1AE3 C20 H18 SING N N 53 A1AE3 C22 H21 SING N N 54 A1AE3 C22 H20 SING N N 55 A1AE3 C22 H19 SING N N 56 A1AE3 C24 H23 SING N N 57 A1AE3 C26 H26 SING N N 58 A1AE3 C26 H25 SING N N 59 A1AE3 C26 H24 SING N N 60 A1AE3 C12 H11 SING N N 61 A1AE3 C16 H15 SING N N 62 A1AE3 C18 H16 SING N N 63 A1AE3 C18 H17 SING N N 64 A1AE3 C2 H1 SING N N 65 A1AE3 C2 H2 SING N N 66 A1AE3 C23 H22 SING N N 67 A1AE3 C27 H27 SING N N 68 A1AE3 C9 H10 SING N N 69 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1AE3 SMILES ACDLabs 12.01 "O=C(N1CC2(C1)COC2)c1cc2ncn(Cc3ccc(OCc4ccc(OC)nc4)c(OC)c3)c2nc1" A1AE3 InChI InChI 1.06 "InChI=1S/C27H27N5O5/c1-34-23-7-18(3-5-22(23)37-12-19-4-6-24(35-2)28-9-19)11-31-17-30-21-8-20(10-29-25(21)31)26(33)32-13-27(14-32)15-36-16-27/h3-10,17H,11-16H2,1-2H3" A1AE3 InChIKey InChI 1.06 GGMUAMIMZXIUOT-UHFFFAOYSA-N A1AE3 SMILES_CANONICAL CACTVS 3.385 "COc1ccc(COc2ccc(Cn3cnc4cc(cnc34)C(=O)N5CC6(COC6)C5)cc2OC)cn1" A1AE3 SMILES CACTVS 3.385 "COc1ccc(COc2ccc(Cn3cnc4cc(cnc34)C(=O)N5CC6(COC6)C5)cc2OC)cn1" A1AE3 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COc1ccc(cn1)COc2ccc(cc2OC)Cn3cnc4c3ncc(c4)C(=O)N5CC6(C5)COC6" A1AE3 SMILES "OpenEye OEToolkits" 2.0.7 "COc1ccc(cn1)COc2ccc(cc2OC)Cn3cnc4c3ncc(c4)C(=O)N5CC6(C5)COC6" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1AE3 "SYSTEMATIC NAME" ACDLabs 12.01 "[3-({3-methoxy-4-[(6-methoxypyridin-3-yl)methoxy]phenyl}methyl)-3H-imidazo[4,5-b]pyridin-6-yl](2-oxa-6-azaspiro[3.3]heptan-6-yl)methanone" A1AE3 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "[3-[[3-methoxy-4-[(6-methoxypyridin-3-yl)methoxy]phenyl]methyl]imidazo[4,5-b]pyridin-6-yl]-(2-oxa-6-azaspiro[3.3]heptan-6-yl)methanone" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1AE3 "Create component" 2024-02-19 RCSB A1AE3 "Initial release" 2024-05-29 RCSB #