data_A1AFT # _chem_comp.id A1AFT _chem_comp.name "(5M)-5-(3-bromo-4-fluorophenyl)-6-ethynyl-3-[2-(3-fluoro-3-methylazetidin-1-yl)-2-oxoethyl]thieno[2,3-d]pyrimidin-4(3H)-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H14 Br F2 N3 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-02-26 _chem_comp.pdbx_modified_date 2025-10-24 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 478.310 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1AFT _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9ARE _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1AFT C13 C1 C 0 1 N N N N N N 194.310 187.581 130.588 7.540 1.335 0.193 C13 A1AFT 1 A1AFT C15 C2 C 0 1 N N N N N N 193.210 187.630 128.464 5.525 0.361 -1.069 C15 A1AFT 2 A1AFT C17 C3 C 0 1 N N N N N N 193.149 185.534 123.539 1.520 -3.530 0.170 C17 A1AFT 3 A1AFT C20 C4 C 0 1 Y N N N N N 193.309 184.036 121.506 -0.765 -3.492 -0.210 C20 A1AFT 4 A1AFT C22 C5 C 0 1 Y N N N N N 194.168 180.558 122.299 -2.514 -0.225 0.454 C22 A1AFT 5 A1AFT C24 C6 C 0 1 Y N N N N N 196.038 179.663 123.466 -3.644 1.346 1.877 C24 A1AFT 6 A1AFT C01 C7 C 0 1 N N N N N N 193.705 180.764 117.727 -5.645 -2.009 -0.605 C01 A1AFT 7 A1AFT C02 C8 C 0 1 N N N N N N 193.677 181.249 118.803 -4.502 -2.240 -0.478 C02 A1AFT 8 A1AFT C03 C9 C 0 1 Y N N N N N 193.611 182.010 120.097 -3.106 -2.523 -0.323 C03 A1AFT 9 A1AFT C04 C10 C 0 1 Y N N N N N 193.783 181.737 121.505 -2.179 -1.622 0.100 C04 A1AFT 10 A1AFT C05 C11 C 0 1 Y N N N N N 193.611 183.000 122.348 -0.829 -2.156 0.173 C05 A1AFT 11 A1AFT C06 C12 C 0 1 N N N N N N 193.694 183.184 123.876 0.385 -1.516 0.575 C06 A1AFT 12 A1AFT N07 N1 N 0 1 N N N N N N 193.455 184.449 124.448 1.529 -2.228 0.555 N07 A1AFT 13 A1AFT C08 C13 C 0 1 N N N N N N 193.533 184.589 125.893 2.789 -1.594 0.952 C08 A1AFT 14 A1AFT C09 C14 C 0 1 N N N N N N 193.322 186.015 126.416 3.444 -0.980 -0.258 C09 A1AFT 15 A1AFT N10 N2 N 0 1 N N N N N N 193.374 186.331 127.800 4.623 -0.337 -0.133 N10 A1AFT 16 A1AFT C11 C15 C 0 1 N N N N N N 193.567 185.655 129.084 5.529 -0.050 0.996 C11 A1AFT 17 A1AFT C12 C16 C 0 1 N N N N N N 193.239 186.937 129.733 6.023 1.144 0.159 C12 A1AFT 18 A1AFT O16 O1 O 0 1 N N N N N N 193.137 186.989 125.779 2.912 -1.064 -1.345 O16 A1AFT 19 A1AFT N18 N3 N 0 1 N N N N N N 193.070 185.365 122.080 0.426 -4.130 -0.194 N18 A1AFT 20 A1AFT O19 O2 O 0 1 N N N N N N 193.955 182.326 124.622 0.386 -0.347 0.920 O19 A1AFT 21 A1AFT S21 S1 S 0 1 Y N N N N N 193.253 183.538 119.939 -2.363 -4.075 -0.654 S21 A1AFT 22 A1AFT C23 C17 C 0 1 Y N N N N N 195.480 180.641 122.687 -3.339 0.042 1.548 C23 A1AFT 23 A1AFT C25 C18 C 0 1 Y N N N N N 195.241 178.621 123.886 -3.133 2.391 1.125 C25 A1AFT 24 A1AFT C27 C19 C 0 1 Y N N N N N 193.929 178.588 123.514 -2.312 2.133 0.038 C27 A1AFT 25 A1AFT C29 C20 C 0 1 Y N N N N N 193.346 179.550 122.731 -2.001 0.831 -0.300 C29 A1AFT 26 A1AFT BR28 BR1 BR 0 0 N N N N N N 192.959 177.107 124.165 -1.619 3.565 -0.984 BR28 A1AFT 27 A1AFT F14 F1 F 0 1 N N N N N N 192.048 186.854 130.279 5.317 2.328 0.396 F14 A1AFT 28 A1AFT F26 F2 F 0 1 N N N N N N 195.749 177.631 124.664 -3.435 3.667 1.452 F26 A1AFT 29 A1AFT H1 H1 H 0 1 N N N N N N 194.356 187.074 131.563 7.858 1.886 -0.692 H1 A1AFT 30 A1AFT H2 H2 H 0 1 N N N N N N 195.283 187.494 130.083 7.816 1.895 1.087 H2 A1AFT 31 A1AFT H3 H3 H 0 1 N N N N N N 194.069 188.644 130.739 8.029 0.361 0.210 H3 A1AFT 32 A1AFT H4 H4 H 0 1 N N N N N N 194.044 188.330 128.308 6.281 -0.285 -1.515 H4 A1AFT 33 A1AFT H5 H5 H 0 1 N N N N N N 192.259 188.138 128.244 5.006 0.978 -1.804 H5 A1AFT 34 A1AFT H6 H6 H 0 1 N N N N N N 192.970 186.515 123.953 2.448 -4.081 0.162 H6 A1AFT 35 A1AFT H7 H7 H 0 1 N N N N N N 197.080 179.708 123.745 -4.283 1.553 2.723 H7 A1AFT 36 A1AFT H8 H8 H 0 1 N N N N N N 193.730 180.329 116.761 -6.668 -1.802 -0.719 H8 A1AFT 37 A1AFT H9 H9 H 0 1 N N N N N N 192.763 183.943 126.341 2.588 -0.817 1.689 H9 A1AFT 38 A1AFT H10 H10 H 0 1 N N N N N N 194.529 184.251 126.216 3.452 -2.342 1.384 H10 A1AFT 39 A1AFT H11 H11 H 0 1 N N N N N N 192.854 184.842 129.287 5.013 0.239 1.911 H11 A1AFT 40 A1AFT H12 H12 H 0 1 N N N N N N 194.591 185.298 129.265 6.287 -0.817 1.156 H12 A1AFT 41 A1AFT H13 H13 H 0 1 N N N N N N 196.078 181.485 122.376 -3.739 -0.772 2.135 H13 A1AFT 42 A1AFT H14 H14 H 0 1 N N N N N N 192.299 179.516 122.469 -1.362 0.631 -1.147 H14 A1AFT 43 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1AFT C01 C02 TRIP N N 1 A1AFT C02 C03 SING N N 2 A1AFT S21 C03 SING Y N 3 A1AFT S21 C20 SING Y N 4 A1AFT C03 C04 DOUB Y N 5 A1AFT C04 C22 SING N N 6 A1AFT C04 C05 SING Y N 7 A1AFT C20 N18 SING N N 8 A1AFT C20 C05 DOUB Y N 9 A1AFT N18 C17 DOUB N N 10 A1AFT C22 C23 DOUB Y N 11 A1AFT C22 C29 SING Y N 12 A1AFT C05 C06 SING N N 13 A1AFT C23 C24 SING Y N 14 A1AFT C29 C27 DOUB Y N 15 A1AFT C24 C25 DOUB Y N 16 A1AFT C27 C25 SING Y N 17 A1AFT C27 BR28 SING N N 18 A1AFT C17 N07 SING N N 19 A1AFT C06 N07 SING N N 20 A1AFT C06 O19 DOUB N N 21 A1AFT C25 F26 SING N N 22 A1AFT N07 C08 SING N N 23 A1AFT O16 C09 DOUB N N 24 A1AFT C08 C09 SING N N 25 A1AFT C09 N10 SING N N 26 A1AFT N10 C15 SING N N 27 A1AFT N10 C11 SING N N 28 A1AFT C15 C12 SING N N 29 A1AFT C11 C12 SING N N 30 A1AFT C12 F14 SING N N 31 A1AFT C12 C13 SING N N 32 A1AFT C13 H1 SING N N 33 A1AFT C13 H2 SING N N 34 A1AFT C13 H3 SING N N 35 A1AFT C15 H4 SING N N 36 A1AFT C15 H5 SING N N 37 A1AFT C17 H6 SING N N 38 A1AFT C24 H7 SING N N 39 A1AFT C01 H8 SING N N 40 A1AFT C08 H9 SING N N 41 A1AFT C08 H10 SING N N 42 A1AFT C11 H11 SING N N 43 A1AFT C11 H12 SING N N 44 A1AFT C23 H13 SING N N 45 A1AFT C29 H14 SING N N 46 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1AFT SMILES ACDLabs 12.01 "CC1(F)CN(C1)C(=O)CN1C=Nc2sc(C#C)c(c2C1=O)c1ccc(F)c(Br)c1" A1AFT InChI InChI 1.06 "InChI=1S/C20H14BrF2N3O2S/c1-3-14-16(11-4-5-13(22)12(21)6-11)17-18(29-14)24-10-25(19(17)28)7-15(27)26-8-20(2,23)9-26/h1,4-6,10H,7-9H2,2H3" A1AFT InChIKey InChI 1.06 YKNBSYYYBWQJQW-UHFFFAOYSA-N A1AFT SMILES_CANONICAL CACTVS 3.385 "CC1(F)CN(C1)C(=O)CN2C=Nc3sc(C#C)c(c4ccc(F)c(Br)c4)c3C2=O" A1AFT SMILES CACTVS 3.385 "CC1(F)CN(C1)C(=O)CN2C=Nc3sc(C#C)c(c4ccc(F)c(Br)c4)c3C2=O" A1AFT SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1(CN(C1)C(=O)CN2C=Nc3c(c(c(s3)C#C)c4ccc(c(c4)Br)F)C2=O)F" A1AFT SMILES "OpenEye OEToolkits" 2.0.7 "CC1(CN(C1)C(=O)CN2C=Nc3c(c(c(s3)C#C)c4ccc(c(c4)Br)F)C2=O)F" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1AFT "SYSTEMATIC NAME" ACDLabs 12.01 "(5M)-5-(3-bromo-4-fluorophenyl)-6-ethynyl-3-[2-(3-fluoro-3-methylazetidin-1-yl)-2-oxoethyl]thieno[2,3-d]pyrimidin-4(3H)-one" A1AFT "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "5-(3-bromanyl-4-fluoranyl-phenyl)-6-ethynyl-3-[2-(3-fluoranyl-3-methyl-azetidin-1-yl)-2-oxidanylidene-ethyl]thieno[2,3-d]pyrimidin-4-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1AFT "Create component" 2024-02-26 RCSB A1AFT "Initial release" 2025-10-29 RCSB #