data_A1AFY # _chem_comp.id A1AFY _chem_comp.name "(R)-mevaldehyde" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C6 H10 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "(3R)-3-hydroxy-3-methyl-5-oxopentanoic acid" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-02-26 _chem_comp.pdbx_modified_date 2024-03-15 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 146.141 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1AFY _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8VLQ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1AFY C02 C1 C 0 1 N N R N N N 84.191 124.685 107.865 0.308 0.026 0.142 C02 A1AFY 1 A1AFY C03 C2 C 0 1 N N N N N N 83.250 124.292 106.701 0.401 -0.753 -1.172 C03 A1AFY 2 A1AFY C04 C3 C 0 1 N N N N N N 84.798 123.427 108.509 -0.907 0.954 0.100 C04 A1AFY 3 A1AFY C05 C4 C 0 1 N N N N N N 85.652 122.558 107.528 -2.158 0.135 -0.088 C05 A1AFY 4 A1AFY C08 C5 C 0 1 N N N N N N 83.417 125.508 108.939 1.578 0.857 0.333 C08 A1AFY 5 A1AFY C09 C6 C 0 1 N N N N N N 83.287 126.966 108.569 2.784 -0.043 0.252 C09 A1AFY 6 A1AFY O01 O1 O 0 1 N N N N N N 85.130 125.559 107.314 0.171 -0.891 1.230 O01 A1AFY 7 A1AFY O06 O2 O 0 1 N N N N N N 85.663 121.328 107.769 -3.354 0.742 -0.154 O06 A1AFY 8 A1AFY O07 O3 O 0 1 N N N N N N 86.252 123.129 106.598 -2.085 -1.068 -0.179 O07 A1AFY 9 A1AFY O10 O4 O 0 1 N N N N N N 83.472 127.860 109.369 3.667 0.201 -0.536 O10 A1AFY 10 A1AFY H1 H1 H 0 1 N N N N N N 82.480 123.599 107.070 0.506 -0.054 -2.002 H1 A1AFY 11 A1AFY H2 H2 H 0 1 N N N N N N 82.768 125.195 106.299 1.267 -1.414 -1.142 H2 A1AFY 12 A1AFY H3 H3 H 0 1 N N N N N N 83.834 123.803 105.907 -0.504 -1.345 -1.308 H3 A1AFY 13 A1AFY H4 H4 H 0 1 N N N N N N 83.977 122.806 108.896 -0.974 1.508 1.036 H4 A1AFY 14 A1AFY H5 H5 H 0 1 N N N N N N 85.443 123.742 109.343 -0.803 1.653 -0.730 H5 A1AFY 15 A1AFY H6 H6 H 0 1 N N N N N N 82.409 125.082 109.051 1.637 1.615 -0.448 H6 A1AFY 16 A1AFY H7 H7 H 0 1 N N N N N N 83.955 125.434 109.895 1.552 1.342 1.309 H7 A1AFY 17 A1AFY H8 H8 H 0 1 N N N N N N 83.019 127.223 107.555 2.859 -0.905 0.897 H8 A1AFY 18 A1AFY H9 H9 H 0 1 N N N N N N 85.818 125.059 106.891 0.106 -0.466 2.096 H9 A1AFY 19 A1AFY H10 H10 H 0 1 N N N N N N 86.206 120.884 107.128 -4.128 0.175 -0.276 H10 A1AFY 20 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1AFY O07 C05 DOUB N N 1 A1AFY C03 C02 SING N N 2 A1AFY O01 C02 SING N N 3 A1AFY C05 O06 SING N N 4 A1AFY C05 C04 SING N N 5 A1AFY C02 C04 SING N N 6 A1AFY C02 C08 SING N N 7 A1AFY C09 C08 SING N N 8 A1AFY C09 O10 DOUB N N 9 A1AFY C03 H1 SING N N 10 A1AFY C03 H2 SING N N 11 A1AFY C03 H3 SING N N 12 A1AFY C04 H4 SING N N 13 A1AFY C04 H5 SING N N 14 A1AFY C08 H6 SING N N 15 A1AFY C08 H7 SING N N 16 A1AFY C09 H8 SING N N 17 A1AFY O01 H9 SING N N 18 A1AFY O06 H10 SING N N 19 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1AFY SMILES ACDLabs 12.01 "CC(O)(CC=O)CC(O)=O" A1AFY InChI InChI 1.06 "InChI=1S/C6H10O4/c1-6(10,2-3-7)4-5(8)9/h3,10H,2,4H2,1H3,(H,8,9)/t6-/m1/s1" A1AFY InChIKey InChI 1.06 CWCYSIIDJAVQSK-ZCFIWIBFSA-N A1AFY SMILES_CANONICAL CACTVS 3.385 "C[C@@](O)(CC=O)CC(O)=O" A1AFY SMILES CACTVS 3.385 "C[C](O)(CC=O)CC(O)=O" A1AFY SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@](CC=O)(CC(=O)O)O" A1AFY SMILES "OpenEye OEToolkits" 2.0.7 "CC(CC=O)(CC(=O)O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1AFY "SYSTEMATIC NAME" ACDLabs 12.01 "(3R)-3-hydroxy-3-methyl-5-oxopentanoic acid" A1AFY "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(3~{R})-3-methyl-3-oxidanyl-5-oxidanylidene-pentanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1AFY "Create component" 2024-02-26 RCSB A1AFY "Initial release" 2024-03-20 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id A1AFY _pdbx_chem_comp_synonyms.name "(3R)-3-hydroxy-3-methyl-5-oxopentanoic acid" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type "systematic name" #