data_A1AG0
#
_chem_comp.id A1AG0
_chem_comp.name "9-{(1R)-1-[(5P)-5-(4-chloro-1H-imidazol-2-yl)pyridin-3-yl]ethoxy}-1,4-dihydro-2H-pyrano[3,4-c]quinoline"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C22 H19 Cl N4 O2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2024-03-01
_chem_comp.pdbx_modified_date 2024-11-22
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 406.865
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code A1AG0
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 9AUX
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
_chem_comp.pdbx_pcm ?
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
A1AG0 C4 C1 C 0 1 Y N N N N N -25.445 -23.117 49.529 -2.877 0.415 -0.521 C4 A1AG0 1
A1AG0 C5 C2 C 0 1 Y N N N N N -26.663 -23.783 49.738 -3.951 1.182 -0.056 C5 A1AG0 2
A1AG0 C6 C3 C 0 1 Y N N N N N -26.958 -24.283 51.013 -3.812 2.569 0.007 C6 A1AG0 3
A1AG0 C8 C4 C 0 1 Y N N N N N -24.969 -23.497 51.852 -1.660 2.450 -0.809 C8 A1AG0 4
A1AG0 C9 C5 C 0 1 Y N N N N N -27.643 -24.018 48.658 -5.213 0.533 0.363 C9 A1AG0 5
A1AG0 C12 C6 C 0 1 Y N N N N N -28.637 -24.257 46.711 -7.260 0.209 1.092 C12 A1AG0 6
A1AG0 C13 C7 C 0 1 Y N N N N N -29.503 -24.554 47.702 -6.698 -0.980 0.793 C13 A1AG0 7
A1AG0 C3 C8 C 0 1 Y N N N N N -24.600 -22.975 50.625 -1.719 1.071 -0.901 C3 A1AG0 8
A1AG0 C1 C9 C 0 1 N N N N N N -22.334 -23.177 49.708 -0.502 0.349 -2.938 C1 A1AG0 9
A1AG0 C17 C10 C 0 1 Y N N N N N -24.050 -19.965 50.358 1.748 0.036 -0.792 C17 A1AG0 10
A1AG0 C18 C11 C 0 1 Y N N N N N -23.957 -19.672 51.732 1.675 -1.262 -1.307 C18 A1AG0 11
A1AG0 C19 C12 C 0 1 Y N N N N N -24.601 -18.586 52.250 2.739 -2.106 -1.234 C19 A1AG0 12
A1AG0 C2 C13 C 0 1 N N R N N N -23.278 -22.274 50.500 -0.534 0.291 -1.409 C2 A1AG0 13
A1AG0 C20 C14 C 0 1 Y N N N N N -25.377 -17.748 51.420 3.934 -1.672 -0.633 C20 A1AG0 14
A1AG0 C21 C15 C 0 1 Y N N N N N -25.464 -18.051 50.040 4.009 -0.357 -0.112 C21 A1AG0 15
A1AG0 C22 C16 C 0 1 Y N N N N N -24.783 -19.162 49.523 2.894 0.490 -0.202 C22 A1AG0 16
A1AG0 C23 C17 C 0 1 Y N N N N N -26.238 -17.226 49.210 5.209 0.074 0.488 C23 A1AG0 17
A1AG0 C24 C18 C 0 1 Y N N N N N -26.889 -16.161 49.770 6.252 -0.798 0.549 C24 A1AG0 18
A1AG0 C25 C19 C 0 1 Y N N N N N -26.765 -15.906 51.136 6.111 -2.081 0.013 C25 A1AG0 19
A1AG0 C27 C20 C 0 1 N N N N N N -27.736 -15.236 48.938 7.561 -0.414 1.187 C27 A1AG0 20
A1AG0 C29 C21 C 0 1 N N N N N N -27.721 -17.044 47.293 6.507 1.574 1.981 C29 A1AG0 21
A1AG0 C30 C22 C 0 1 N N N N N N -26.347 -17.540 47.740 5.308 1.472 1.035 C30 A1AG0 22
A1AG0 N10 N1 N 0 1 Y N N N N N -27.447 -23.926 47.311 -6.324 1.173 0.826 N10 A1AG0 23
A1AG0 N14 N2 N 0 1 Y N N N N N -28.877 -24.410 48.861 -5.456 -0.759 0.346 N14 A1AG0 24
A1AG0 N26 N3 N 0 1 Y N N N N N -26.031 -16.682 51.903 4.996 -2.479 -0.547 N26 A1AG0 25
A1AG0 N7 N4 N 0 1 Y N N N N N -26.115 -24.128 52.010 -2.689 3.147 -0.366 N7 A1AG0 26
A1AG0 O16 O1 O 0 1 N N N N N N -23.402 -21.028 49.802 0.669 0.857 -0.885 O16 A1AG0 27
A1AG0 O28 O2 O 0 1 N N N N N N -27.780 -15.631 47.564 7.647 1.003 1.329 O28 A1AG0 28
A1AG0 CL15 CL1 CL 0 0 N N N N N N -31.154 -25.048 47.537 -7.459 -2.533 0.949 CL15 A1AG0 29
A1AG0 H1 H1 H 0 1 N N N N N N -25.175 -22.731 48.557 -2.949 -0.661 -0.579 H1 A1AG0 30
A1AG0 H2 H2 H 0 1 N N N N N N -27.890 -24.803 51.179 -4.632 3.174 0.364 H2 A1AG0 31
A1AG0 H3 H3 H 0 1 N N N N N N -24.305 -23.385 52.696 -0.758 2.964 -1.105 H3 A1AG0 32
A1AG0 H4 H4 H 0 1 N N N N N N -28.840 -24.276 45.650 -8.257 0.370 1.474 H4 A1AG0 33
A1AG0 H5 H5 H 0 1 N N N N N N -22.225 -24.140 50.228 0.355 -0.215 -3.305 H5 A1AG0 34
A1AG0 H6 H6 H 0 1 N N N N N N -22.747 -23.348 48.703 -1.419 -0.083 -3.337 H6 A1AG0 35
A1AG0 H7 H7 H 0 1 N N N N N N -21.350 -22.693 49.623 -0.419 1.387 -3.260 H7 A1AG0 36
A1AG0 H8 H8 H 0 1 N N N N N N -23.373 -20.310 52.379 0.759 -1.600 -1.770 H8 A1AG0 37
A1AG0 H9 H9 H 0 1 N N N N N N -24.516 -18.366 53.304 2.667 -3.106 -1.636 H9 A1AG0 38
A1AG0 H10 H10 H 0 1 N N N N N N -22.857 -22.109 51.503 -0.617 -0.747 -1.087 H10 A1AG0 39
A1AG0 H12 H11 H 0 1 N N N N N N -24.836 -19.385 48.468 2.940 1.494 0.193 H12 A1AG0 40
A1AG0 H13 H12 H 0 1 N N N N N N -27.278 -15.060 51.569 6.946 -2.764 0.063 H13 A1AG0 41
A1AG0 H14 H13 H 0 1 N N N N N N -27.318 -14.220 49.001 7.633 -0.880 2.170 H14 A1AG0 42
A1AG0 H15 H14 H 0 1 N N N N N N -28.760 -15.237 49.339 8.383 -0.762 0.562 H15 A1AG0 43
A1AG0 H16 H15 H 0 1 N N N N N N -28.510 -17.567 47.853 6.702 2.621 2.213 H16 A1AG0 44
A1AG0 H17 H16 H 0 1 N N N N N N -27.854 -17.226 46.216 6.297 1.027 2.900 H17 A1AG0 45
A1AG0 H18 H17 H 0 1 N N N N N N -26.262 -18.624 47.575 5.435 2.174 0.211 H18 A1AG0 46
A1AG0 H19 H18 H 0 1 N N N N N N -25.555 -17.021 47.180 4.395 1.714 1.579 H19 A1AG0 47
A1AG0 H11 H19 H 0 1 N N N N N N -26.599 -23.667 46.849 -6.431 2.130 0.945 H11 A1AG0 48
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
A1AG0 C12 N10 SING Y N 1
A1AG0 C12 C13 DOUB Y N 2
A1AG0 C29 O28 SING N N 3
A1AG0 C29 C30 SING N N 4
A1AG0 N10 C9 SING Y N 5
A1AG0 CL15 C13 SING N N 6
A1AG0 O28 C27 SING N N 7
A1AG0 C13 N14 SING Y N 8
A1AG0 C30 C23 SING N N 9
A1AG0 C9 N14 DOUB Y N 10
A1AG0 C9 C5 SING N N 11
A1AG0 C27 C24 SING N N 12
A1AG0 C23 C24 DOUB Y N 13
A1AG0 C23 C21 SING Y N 14
A1AG0 C22 C21 DOUB Y N 15
A1AG0 C22 C17 SING Y N 16
A1AG0 C4 C5 DOUB Y N 17
A1AG0 C4 C3 SING Y N 18
A1AG0 C1 C2 SING N N 19
A1AG0 C5 C6 SING Y N 20
A1AG0 C24 C25 SING Y N 21
A1AG0 O16 C17 SING N N 22
A1AG0 O16 C2 SING N N 23
A1AG0 C21 C20 SING Y N 24
A1AG0 C17 C18 DOUB Y N 25
A1AG0 C2 C3 SING N N 26
A1AG0 C3 C8 DOUB Y N 27
A1AG0 C6 N7 DOUB Y N 28
A1AG0 C25 N26 DOUB Y N 29
A1AG0 C20 N26 SING Y N 30
A1AG0 C20 C19 DOUB Y N 31
A1AG0 C18 C19 SING Y N 32
A1AG0 C8 N7 SING Y N 33
A1AG0 C4 H1 SING N N 34
A1AG0 C6 H2 SING N N 35
A1AG0 C8 H3 SING N N 36
A1AG0 C12 H4 SING N N 37
A1AG0 C1 H5 SING N N 38
A1AG0 C1 H6 SING N N 39
A1AG0 C1 H7 SING N N 40
A1AG0 C18 H8 SING N N 41
A1AG0 C19 H9 SING N N 42
A1AG0 C2 H10 SING N N 43
A1AG0 C22 H12 SING N N 44
A1AG0 C25 H13 SING N N 45
A1AG0 C27 H14 SING N N 46
A1AG0 C27 H15 SING N N 47
A1AG0 C29 H16 SING N N 48
A1AG0 C29 H17 SING N N 49
A1AG0 C30 H18 SING N N 50
A1AG0 C30 H19 SING N N 51
A1AG0 N10 H11 SING N N 52
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
A1AG0 SMILES ACDLabs 12.01 "Clc1nc([NH]c1)c1cc(cnc1)C(C)Oc1cc2c3CCOCc3cnc2cc1"
A1AG0 InChI InChI 1.06 "InChI=1S/C22H19ClN4O2/c1-13(14-6-15(9-24-8-14)22-26-11-21(23)27-22)29-17-2-3-20-19(7-17)18-4-5-28-12-16(18)10-25-20/h2-3,6-11,13H,4-5,12H2,1H3,(H,26,27)/t13-/m1/s1"
A1AG0 InChIKey InChI 1.06 ZZTIEDAGFODKQY-CYBMUJFWSA-N
A1AG0 SMILES_CANONICAL CACTVS 3.385 "C[C@@H](Oc1ccc2ncc3COCCc3c2c1)c4cncc(c4)c5[nH]cc(Cl)n5"
A1AG0 SMILES CACTVS 3.385 "C[CH](Oc1ccc2ncc3COCCc3c2c1)c4cncc(c4)c5[nH]cc(Cl)n5"
A1AG0 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H](c1cc(cnc1)c2[nH]cc(n2)Cl)Oc3ccc4c(c3)c5c(cn4)COCC5"
A1AG0 SMILES "OpenEye OEToolkits" 2.0.7 "CC(c1cc(cnc1)c2[nH]cc(n2)Cl)Oc3ccc4c(c3)c5c(cn4)COCC5"
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
A1AG0 "SYSTEMATIC NAME" ACDLabs 12.01 "9-{(1R)-1-[(5P)-5-(4-chloro-1H-imidazol-2-yl)pyridin-3-yl]ethoxy}-1,4-dihydro-2H-pyrano[3,4-c]quinoline"
A1AG0 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "9-[(1~{R})-1-[5-(4-chloranyl-1~{H}-imidazol-2-yl)pyridin-3-yl]ethoxy]-2,4-dihydro-1~{H}-pyrano[3,4-c]quinoline"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
A1AG0 "Create component" 2024-03-01 RCSB
A1AG0 "Initial release" 2024-11-27 RCSB
#