data_A1AGA # _chem_comp.id A1AGA _chem_comp.name "(1S,2S)-2-({N-[({(2S)-1-[(3-fluorophenyl)methyl]-5-oxopyrrolidin-2-yl}methoxy)carbonyl]-L-leucyl}amino)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H37 F N4 O9 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-02-29 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 600.657 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1AGA _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9ASW _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1AGA C1 C1 C 0 1 N N S N N N 9.195 18.362 28.332 -5.125 1.257 -0.590 C1 A1AGA 1 A1AGA C10 C2 C 0 1 N N N N N N 13.174 21.714 28.244 -1.341 2.203 2.023 C10 A1AGA 2 A1AGA C11 C3 C 0 1 N N N N N N 14.528 22.302 27.847 -0.273 2.475 3.085 C11 A1AGA 3 A1AGA C12 C4 C 0 1 N N N N N N 15.600 21.985 28.889 -0.617 3.763 3.835 C12 A1AGA 4 A1AGA C2 C5 C 0 1 N N S N N N 8.966 19.731 27.724 -4.340 -0.010 -0.243 C2 A1AGA 5 A1AGA C3 C6 C 0 1 N N N N N N 7.993 19.658 26.540 -5.279 -1.031 0.401 C3 A1AGA 6 A1AGA C4 C7 C 0 1 N N S N N N 7.534 21.030 26.049 -4.503 -2.313 0.710 C4 A1AGA 7 A1AGA C5 C8 C 0 1 N N N N N N 6.609 20.938 24.850 -5.406 -3.333 1.369 C5 A1AGA 8 A1AGA C6 C9 C 0 1 N N N N N N 5.706 22.594 26.221 -4.199 -4.494 -0.240 C6 A1AGA 9 A1AGA C7 C10 C 0 1 N N N N N N 6.730 21.842 27.059 -4.049 -3.000 -0.599 C7 A1AGA 10 A1AGA C8 C11 C 0 1 N N N N N N 10.708 21.459 27.811 -2.040 0.642 0.228 C8 A1AGA 11 A1AGA C9 C12 C 0 1 N N S N N N 12.037 21.978 27.260 -0.933 0.985 1.191 C9 A1AGA 12 A1AGA N2 N1 N 0 1 N N N N N N 10.248 20.306 27.320 -3.264 0.324 0.693 N2 A1AGA 13 A1AGA O1 O1 O 0 1 N N N N N N 7.979 17.800 28.809 -4.226 2.258 -1.070 O1 A1AGA 14 A1AGA O3 O2 O 0 1 N N N N N N 10.662 25.107 26.176 2.616 1.417 0.337 O3 A1AGA 15 A1AGA O5 O3 O 0 1 N N N N N N 10.376 23.026 25.365 1.567 0.739 2.171 O5 A1AGA 16 A1AGA C13 C13 C 0 1 N N N N N N 14.948 21.805 26.478 -0.226 1.307 4.072 C13 A1AGA 17 A1AGA C14 C14 C 0 1 N N N N N N 10.916 23.774 26.142 1.493 1.135 1.025 C14 A1AGA 18 A1AGA C15 C15 C 0 1 N N N N N N 11.755 26.028 25.970 3.878 1.225 1.028 C15 A1AGA 19 A1AGA C16 C16 C 0 1 N N S N N N 12.064 25.950 24.490 5.032 1.594 0.094 C16 A1AGA 20 A1AGA C17 C17 C 0 1 N N N N N N 11.693 28.487 24.110 4.890 -0.765 -0.976 C17 A1AGA 21 A1AGA C18 C18 C 0 1 Y N N N N N 10.219 28.719 23.885 6.235 -1.418 -0.790 C18 A1AGA 22 A1AGA C19 C19 C 0 1 Y N N N N N 9.754 29.977 23.541 6.977 -1.797 -1.893 C19 A1AGA 23 A1AGA C20 C20 C 0 1 Y N N N N N 8.402 30.202 23.341 8.214 -2.392 -1.724 C20 A1AGA 24 A1AGA C21 C21 C 0 1 Y N N N N N 7.493 29.180 23.490 8.709 -2.609 -0.452 C21 A1AGA 25 A1AGA C22 C22 C 0 1 Y N N N N N 7.971 27.949 23.837 7.966 -2.230 0.653 C22 A1AGA 26 A1AGA C23 C23 C 0 1 Y N N N N N 9.303 27.693 24.043 6.728 -1.634 0.483 C23 A1AGA 27 A1AGA C24 C24 C 0 1 N N N N N N 12.784 26.934 22.523 5.263 1.362 -2.206 C24 A1AGA 28 A1AGA C25 C25 C 0 1 N N N N N N 13.550 25.653 22.682 5.385 2.845 -1.921 C25 A1AGA 29 A1AGA C26 C26 C 0 1 N N N N N N 13.450 25.378 24.183 4.814 3.006 -0.493 C26 A1AGA 30 A1AGA F1 F1 F 0 1 N N N N N N 7.086 26.928 23.993 8.449 -2.441 1.897 F1 A1AGA 31 A1AGA N1 N2 N 0 1 N N N N N N 5.585 21.766 25.026 -5.219 -4.543 0.815 N1 A1AGA 32 A1AGA N3 N3 N 0 1 N N N N N N 11.908 23.395 26.964 0.288 1.292 0.442 N3 A1AGA 33 A1AGA N4 N4 N 0 1 N N N N N N 12.179 27.178 23.699 5.061 0.688 -1.061 N4 A1AGA 34 A1AGA O2 O4 O 0 1 N N N N N N 6.786 20.212 23.867 -6.185 -3.093 2.268 O2 A1AGA 35 A1AGA O4 O5 O 0 1 N N N N N N 12.792 27.675 21.544 5.335 0.858 -3.306 O4 A1AGA 36 A1AGA O6 O6 O 0 1 N N N N N N 10.073 22.130 28.622 -1.830 0.653 -0.967 O6 A1AGA 37 A1AGA H1 H1 H 0 1 N N N N N N 9.868 18.501 29.191 -5.635 1.623 0.301 H1 A1AGA 38 A1AGA S1 S1 S 0 1 N Y N N N N 9.581 17.720 27.568 -6.349 0.877 -1.874 S1 A1AGA 39 A1AGA H3 H3 H 0 1 N N N N N N 12.889 22.142 29.216 -2.296 2.007 2.511 H3 A1AGA 40 A1AGA H4 H4 H 0 1 N N N N N N 13.292 20.625 28.343 -1.436 3.072 1.373 H4 A1AGA 41 A1AGA H5 H5 H 0 1 N N N N N N 14.420 23.395 27.795 0.699 2.583 2.603 H5 A1AGA 42 A1AGA H6 H6 H 0 1 N N N N N N 15.276 22.354 29.873 -1.589 3.655 4.317 H6 A1AGA 43 A1AGA H7 H7 H 0 1 N N N N N N 15.754 20.897 28.937 0.144 3.957 4.591 H7 A1AGA 44 A1AGA H8 H8 H 0 1 N N N N N N 16.543 22.476 28.606 -0.650 4.595 3.132 H8 A1AGA 45 A1AGA H9 H9 H 0 1 N N N N N N 8.515 20.376 28.493 -3.913 -0.432 -1.153 H9 A1AGA 46 A1AGA H10 H10 H 0 1 N N N N N N 7.107 19.084 26.851 -5.684 -0.620 1.326 H10 A1AGA 47 A1AGA H11 H11 H 0 1 N N N N N N 8.493 19.139 25.709 -6.096 -1.257 -0.284 H11 A1AGA 48 A1AGA H12 H12 H 0 1 N N N N N N 8.422 21.612 25.762 -3.644 -2.095 1.344 H12 A1AGA 49 A1AGA H13 H13 H 0 1 N N N N N N 6.066 23.602 25.968 -4.530 -5.060 -1.111 H13 A1AGA 50 A1AGA H14 H14 H 0 1 N N N N N N 4.743 22.670 26.748 -3.254 -4.891 0.130 H14 A1AGA 51 A1AGA H15 H15 H 0 1 N N N N N N 6.230 21.179 27.780 -4.703 -2.730 -1.428 H15 A1AGA 52 A1AGA H16 H16 H 0 1 N N N N N N 7.382 22.545 27.598 -3.011 -2.756 -0.827 H16 A1AGA 53 A1AGA H17 H17 H 0 1 N N N N N N 12.257 21.435 26.329 -0.751 0.138 1.852 H17 A1AGA 54 A1AGA H18 H18 H 0 1 N N N N N N 10.803 19.815 26.648 -3.432 0.315 1.648 H18 A1AGA 55 A1AGA H19 H19 H 0 1 N N N N N N 8.151 16.944 29.184 -3.543 2.511 -0.434 H19 A1AGA 56 A1AGA H20 H20 H 0 1 N N N N N N 15.923 22.240 26.213 0.019 0.389 3.537 H20 A1AGA 57 A1AGA H21 H21 H 0 1 N N N N N N 15.028 20.708 26.495 0.535 1.501 4.828 H21 A1AGA 58 A1AGA H22 H22 H 0 1 N N N N N N 14.197 22.106 25.732 -1.197 1.199 4.554 H22 A1AGA 59 A1AGA H23 H23 H 0 1 N N N N N N 12.631 25.727 26.564 3.909 1.861 1.912 H23 A1AGA 60 A1AGA H24 H24 H 0 1 N N N N N N 11.457 27.049 26.249 3.973 0.181 1.328 H24 A1AGA 61 A1AGA H25 H25 H 0 1 N N N N N N 11.316 25.295 24.019 5.980 1.551 0.630 H25 A1AGA 62 A1AGA H26 H26 H 0 1 N N N N N N 11.897 28.605 25.184 4.432 -1.131 -1.895 H26 A1AGA 63 A1AGA H27 H27 H 0 1 N N N N N N 12.249 29.250 23.545 4.248 -1.006 -0.129 H27 A1AGA 64 A1AGA H28 H28 H 0 1 N N N N N N 10.453 30.792 23.427 6.591 -1.628 -2.887 H28 A1AGA 65 A1AGA H29 H29 H 0 1 N N N N N N 8.058 31.188 23.066 8.793 -2.687 -2.586 H29 A1AGA 66 A1AGA H30 H30 H 0 1 N N N N N N 6.437 29.346 23.338 9.675 -3.073 -0.321 H30 A1AGA 67 A1AGA H31 H31 H 0 1 N N N N N N 9.633 26.704 24.325 6.150 -1.335 1.344 H31 A1AGA 68 A1AGA H32 H32 H 0 1 N N N N N N 13.089 24.842 22.100 6.430 3.155 -1.951 H32 A1AGA 69 A1AGA H33 H33 H 0 1 N N N N N N 14.598 25.778 22.372 4.796 3.421 -2.635 H33 A1AGA 70 A1AGA H34 H34 H 0 1 N N N N N N 13.500 24.301 24.401 3.754 3.256 -0.523 H34 A1AGA 71 A1AGA H35 H35 H 0 1 N N N N N N 14.237 25.903 24.744 5.374 3.753 0.069 H35 A1AGA 72 A1AGA H36 H36 H 0 1 N N N N N N 4.807 21.817 24.400 -5.697 -5.345 1.078 H36 A1AGA 73 A1AGA H37 H37 H 0 1 N N N N N N 12.537 24.065 27.359 0.229 1.609 -0.473 H37 A1AGA 74 A1AGA O7 O7 O 0 1 N Y N N N N ? ? ? -7.107 2.035 -2.198 O7 A1AGA 75 A1AGA O9 O9 O 0 1 N Y N N N N ? ? ? -5.770 0.073 -2.892 O9 A1AGA 76 A1AGA O8 O8 O 0 1 N Y N N N N ? ? ? -7.346 -0.045 -1.188 O8 A1AGA 77 A1AGA H2 H2 H 0 1 N N N N N N ? ? ? -8.070 -0.336 -1.759 H2 A1AGA 78 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1AGA O4 C24 DOUB N N 1 A1AGA C24 C25 SING N N 2 A1AGA C24 N4 SING N N 3 A1AGA C25 C26 SING N N 4 A1AGA C20 C21 DOUB Y N 5 A1AGA C20 C19 SING Y N 6 A1AGA C21 C22 SING Y N 7 A1AGA C19 C18 DOUB Y N 8 A1AGA N4 C17 SING N N 9 A1AGA N4 C16 SING N N 10 A1AGA C22 F1 SING N N 11 A1AGA C22 C23 DOUB Y N 12 A1AGA O2 C5 DOUB N N 13 A1AGA C18 C23 SING Y N 14 A1AGA C18 C17 SING N N 15 A1AGA C26 C16 SING N N 16 A1AGA C16 C15 SING N N 17 A1AGA C5 N1 SING N N 18 A1AGA C5 C4 SING N N 19 A1AGA N1 C6 SING N N 20 A1AGA O5 C14 DOUB N N 21 A1AGA C15 O3 SING N N 22 A1AGA C4 C3 SING N N 23 A1AGA C4 C7 SING N N 24 A1AGA C14 O3 SING N N 25 A1AGA C14 N3 SING N N 26 A1AGA C6 C7 SING N N 27 A1AGA C13 C11 SING N N 28 A1AGA C3 C2 SING N N 29 A1AGA N3 C9 SING N N 30 A1AGA C9 C8 SING N N 31 A1AGA C9 C10 SING N N 32 A1AGA N2 C2 SING N N 33 A1AGA N2 C8 SING N N 34 A1AGA C2 C1 SING N N 35 A1AGA C8 O6 DOUB N N 36 A1AGA C11 C10 SING N N 37 A1AGA C11 C12 SING N N 38 A1AGA C1 O1 SING N N 39 A1AGA C1 H1 SING N N 40 A1AGA C1 S1 SING N N 41 A1AGA C10 H3 SING N N 42 A1AGA C10 H4 SING N N 43 A1AGA C11 H5 SING N N 44 A1AGA C12 H6 SING N N 45 A1AGA C12 H7 SING N N 46 A1AGA C12 H8 SING N N 47 A1AGA C2 H9 SING N N 48 A1AGA C3 H10 SING N N 49 A1AGA C3 H11 SING N N 50 A1AGA C4 H12 SING N N 51 A1AGA C6 H13 SING N N 52 A1AGA C6 H14 SING N N 53 A1AGA C7 H15 SING N N 54 A1AGA C7 H16 SING N N 55 A1AGA C9 H17 SING N N 56 A1AGA N2 H18 SING N N 57 A1AGA O1 H19 SING N N 58 A1AGA C13 H20 SING N N 59 A1AGA C13 H21 SING N N 60 A1AGA C13 H22 SING N N 61 A1AGA C15 H23 SING N N 62 A1AGA C15 H24 SING N N 63 A1AGA C16 H25 SING N N 64 A1AGA C17 H26 SING N N 65 A1AGA C17 H27 SING N N 66 A1AGA C19 H28 SING N N 67 A1AGA C20 H29 SING N N 68 A1AGA C21 H30 SING N N 69 A1AGA C23 H31 SING N N 70 A1AGA C25 H32 SING N N 71 A1AGA C25 H33 SING N N 72 A1AGA C26 H34 SING N N 73 A1AGA C26 H35 SING N N 74 A1AGA N1 H36 SING N N 75 A1AGA N3 H37 SING N N 76 A1AGA S1 O7 DOUB N N 77 A1AGA S1 O9 DOUB N N 78 A1AGA S1 O8 SING N N 79 A1AGA O8 H2 SING N N 80 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1AGA SMILES ACDLabs 12.01 "O=C1NCCC1CC(NC(=O)C(CC(C)C)NC(=O)OCC1CCC(=O)N1Cc1cc(F)ccc1)C(O)S(=O)(=O)O" A1AGA InChI InChI 1.06 "InChI=1S/C26H37FN4O9S/c1-15(2)10-20(24(34)29-21(25(35)41(37,38)39)12-17-8-9-28-23(17)33)30-26(36)40-14-19-6-7-22(32)31(19)13-16-4-3-5-18(27)11-16/h3-5,11,15,17,19-21,25,35H,6-10,12-14H2,1-2H3,(H,28,33)(H,29,34)(H,30,36)(H,37,38,39)/t17-,19-,20-,21-,25-/m0/s1" A1AGA InChIKey InChI 1.06 WUKOFKVFVKFOQQ-BEGIFEFTSA-N A1AGA SMILES_CANONICAL CACTVS 3.385 "CC(C)C[C@H](NC(=O)OC[C@@H]1CCC(=O)N1Cc2cccc(F)c2)C(=O)N[C@@H](C[C@@H]3CCNC3=O)[C@@H](O)[S](O)(=O)=O" A1AGA SMILES CACTVS 3.385 "CC(C)C[CH](NC(=O)OC[CH]1CCC(=O)N1Cc2cccc(F)c2)C(=O)N[CH](C[CH]3CCNC3=O)[CH](O)[S](O)(=O)=O" A1AGA SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)C[C@@H](C(=O)N[C@@H](C[C@@H]1CCNC1=O)[C@@H](O)S(=O)(=O)O)NC(=O)OC[C@@H]2CCC(=O)N2Cc3cccc(c3)F" A1AGA SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)CC(C(=O)NC(CC1CCNC1=O)C(O)S(=O)(=O)O)NC(=O)OCC2CCC(=O)N2Cc3cccc(c3)F" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1AGA "SYSTEMATIC NAME" ACDLabs 12.01 "(1S,2S)-2-({N-[({(2S)-1-[(3-fluorophenyl)methyl]-5-oxopyrrolidin-2-yl}methoxy)carbonyl]-L-leucyl}amino)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid" A1AGA "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(1~{S},2~{S})-2-[[(2~{S})-2-[[(2~{S})-1-[(3-fluorophenyl)methyl]-5-oxidanylidene-pyrrolidin-2-yl]methoxycarbonylamino]-4-methyl-pentanoyl]amino]-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propane-1-sulfonic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1AGA "Create component" 2024-02-29 RCSB A1AGA "Initial release" 2024-07-10 RCSB A1AGA "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id A1AGA _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C1 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #