data_A1AGB # _chem_comp.id A1AGB _chem_comp.name "(1R,2S)-2-({N-[({(2S)-1-[(3-fluorophenyl)methyl]-5-oxopyrrolidin-2-yl}methoxy)carbonyl]-L-leucyl}amino)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H37 F N4 O9 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-02-29 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 600.657 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1AGB _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9ASW _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1AGB C14 C1 C 0 1 N N N N N N 10.909 23.618 26.258 -1.290 1.350 -0.906 C14 A1AGB 1 A1AGB C7 C2 C 0 1 N N N N N N 6.682 21.738 27.059 3.414 -3.651 1.178 C7 A1AGB 2 A1AGB N4 N1 N 0 1 N N N N N N 12.169 26.975 23.692 -5.143 0.879 0.582 N4 A1AGB 3 A1AGB C2 C3 C 0 1 N N S N N N 8.922 19.655 27.759 4.003 -0.635 1.192 C2 A1AGB 4 A1AGB C5 C4 C 0 1 N N N N N N 6.558 20.776 24.876 4.937 -3.856 -0.684 C5 A1AGB 5 A1AGB C6 C5 C 0 1 N N N N N N 5.657 22.471 26.203 3.467 -5.092 0.622 C6 A1AGB 6 A1AGB N3 N2 N 0 1 N N N N N N 11.883 23.225 27.099 -0.183 1.417 -0.140 N3 A1AGB 7 A1AGB N1 N3 N 0 1 N N N N N N 5.553 21.634 25.012 4.585 -5.104 -0.329 N1 A1AGB 8 A1AGB C19 C6 C 0 1 Y N N N N N 9.728 29.764 23.474 -6.418 -1.313 -1.517 C19 A1AGB 9 A1AGB C15 C7 C 0 1 N N N N N N 11.781 25.860 26.002 -3.644 1.529 -1.257 C15 A1AGB 10 A1AGB C13 C8 C 0 1 N N N N N N 14.979 21.565 26.458 3.755 2.991 -2.679 C13 A1AGB 11 A1AGB C11 C9 C 0 1 N N N N N N 14.603 22.125 27.814 2.998 1.770 -2.154 C11 A1AGB 12 A1AGB C16 C10 C 0 1 N N S N N N 12.053 25.763 24.514 -4.916 1.869 -0.478 C16 A1AGB 13 A1AGB C18 C11 C 0 1 Y N N N N N 10.201 28.511 23.830 -6.279 -1.135 -0.154 C18 A1AGB 14 A1AGB C8 C12 C 0 1 N N N N N N 10.844 21.171 28.014 1.998 0.513 0.418 C8 A1AGB 15 A1AGB C9 C13 C 0 1 N N S N N N 12.074 21.803 27.362 1.115 1.022 -0.692 C9 A1AGB 16 A1AGB C10 C14 C 0 1 N N N N N N 13.268 21.551 28.278 1.776 2.231 -1.357 C10 A1AGB 17 A1AGB N2 N4 N 0 1 N N N N N N 10.167 20.269 27.299 3.201 -0.024 0.130 N2 A1AGB 18 A1AGB O1 O1 O 0 1 N N N N N N 10.073 18.409 29.491 4.002 1.376 2.532 O1 A1AGB 19 A1AGB C12 C15 C 0 1 N N N N N N 15.690 21.837 28.846 2.542 0.907 -3.332 C12 A1AGB 20 A1AGB C4 C16 C 0 1 N N S N N N 7.481 20.897 26.072 4.065 -2.846 0.029 C4 A1AGB 21 A1AGB C3 C17 C 0 1 N N N N N N 7.925 19.535 26.601 4.917 -1.704 0.590 C3 A1AGB 22 A1AGB C1 C18 C 0 1 N N R N N N 9.213 18.298 28.370 4.855 0.440 1.870 C1 A1AGB 23 A1AGB C17 C19 C 0 1 N N N N N N 11.674 28.292 24.069 -5.000 -0.568 0.406 C17 A1AGB 24 A1AGB C20 C20 C 0 1 Y N N N N N 8.376 29.976 23.263 -7.594 -1.828 -2.032 C20 A1AGB 25 A1AGB O2 O2 O 0 1 N N N N N N 6.726 20.013 23.927 5.826 -3.580 -1.462 O2 A1AGB 26 A1AGB C21 C21 C 0 1 Y N N N N N 7.474 28.948 23.408 -8.631 -2.164 -1.184 C21 A1AGB 27 A1AGB C22 C22 C 0 1 Y N N N N N 7.958 27.722 23.765 -8.493 -1.986 0.183 C22 A1AGB 28 A1AGB C23 C23 C 0 1 Y N N N N N 9.291 27.479 23.984 -7.314 -1.476 0.697 C23 A1AGB 29 A1AGB C24 C24 C 0 1 N N N N N N 12.787 26.717 22.524 -5.493 1.472 1.737 C24 A1AGB 30 A1AGB C25 C25 C 0 1 N N N N N N 13.522 25.420 22.694 -5.534 2.974 1.559 C25 A1AGB 31 A1AGB C26 C26 C 0 1 N N N N N N 13.429 25.174 24.200 -4.752 3.222 0.250 C26 A1AGB 32 A1AGB O3 O3 O 0 1 N N N N N N 10.684 24.958 26.272 -2.496 1.621 -0.373 O3 A1AGB 33 A1AGB F1 F1 F 0 1 N N N N N N 7.080 26.695 23.918 -9.507 -2.315 1.013 F1 A1AGB 34 A1AGB O4 O4 O 0 1 N N N N N N 12.820 27.453 21.542 -5.744 0.887 2.769 O4 A1AGB 35 A1AGB O5 O5 O 0 1 N N N N N N 10.349 22.877 25.488 -1.199 1.050 -2.080 O5 A1AGB 36 A1AGB O6 O6 O 0 1 N N N N N N 10.545 21.460 29.171 1.628 0.587 1.571 O6 A1AGB 37 A1AGB H1 H1 H 0 1 N N N N N N 6.181 21.096 27.799 2.385 -3.334 1.341 H1 A1AGB 38 A1AGB H2 H2 H 0 1 N N N N N N 7.337 22.454 27.578 3.998 -3.565 2.094 H2 A1AGB 39 A1AGB H3 H3 H 0 1 N N N N N N 8.472 20.294 28.533 3.343 -1.094 1.928 H3 A1AGB 40 A1AGB H4 H4 H 0 1 N N N N N N 6.009 23.481 25.945 3.652 -5.800 1.430 H4 A1AGB 41 A1AGB H5 H5 H 0 1 N N N N N N 4.689 22.541 26.721 2.534 -5.334 0.114 H5 A1AGB 42 A1AGB H6 H6 H 0 1 N N N N N N 12.471 23.903 27.540 -0.246 1.728 0.777 H6 A1AGB 43 A1AGB H7 H7 H 0 1 N N N N N N 4.797 21.700 24.360 5.013 -5.909 -0.660 H7 A1AGB 44 A1AGB H8 H8 H 0 1 N N N N N N 10.421 30.584 23.360 -5.609 -1.046 -2.181 H8 A1AGB 45 A1AGB H9 H9 H 0 1 N N N N N N 12.672 25.558 26.573 -3.719 0.515 -1.650 H9 A1AGB 46 A1AGB H10 H10 H 0 1 N N N N N N 11.503 26.889 26.272 -3.524 2.231 -2.082 H10 A1AGB 47 A1AGB H11 H11 H 0 1 N N N N N N 15.943 21.989 26.140 4.080 3.606 -1.839 H11 A1AGB 48 A1AGB H12 H12 H 0 1 N N N N N N 15.064 20.470 26.524 4.626 2.663 -3.247 H12 A1AGB 49 A1AGB H13 H13 H 0 1 N N N N N N 14.203 21.828 25.725 3.099 3.575 -3.324 H13 A1AGB 50 A1AGB H14 H14 H 0 1 N N N N N N 14.496 23.216 27.722 3.654 1.186 -1.508 H14 A1AGB 51 A1AGB H15 H15 H 0 1 N N N N N N 11.292 25.105 24.069 -5.772 1.903 -1.151 H15 A1AGB 52 A1AGB H16 H16 H 0 1 N N N N N N 12.259 21.285 26.409 0.971 0.234 -1.431 H16 A1AGB 53 A1AGB H17 H17 H 0 1 N N N N N N 13.037 21.990 29.260 2.089 2.941 -0.591 H17 A1AGB 54 A1AGB H18 H18 H 0 1 N N N N N N 13.388 20.463 28.382 1.064 2.711 -2.028 H18 A1AGB 55 A1AGB H19 H19 H 0 1 N N N N N N 10.529 20.001 26.406 3.534 -0.005 -0.781 H19 A1AGB 56 A1AGB H20 H20 H 0 1 N N N N N N 10.237 17.546 29.852 3.385 1.831 1.943 H20 A1AGB 57 A1AGB H21 H21 H 0 1 N N N N N N 15.392 22.254 29.819 1.946 1.512 -4.016 H21 A1AGB 58 A1AGB H22 H22 H 0 1 N N N N N N 15.828 20.750 28.939 3.415 0.519 -3.858 H22 A1AGB 59 A1AGB H23 H23 H 0 1 N N N N N N 16.634 22.300 28.523 1.941 0.076 -2.963 H23 A1AGB 60 A1AGB H24 H24 H 0 1 N N N N N N 8.375 21.464 25.772 3.303 -2.456 -0.645 H24 A1AGB 61 A1AGB H25 H25 H 0 1 N N N N N N 7.039 18.987 26.953 5.510 -1.266 -0.213 H25 A1AGB 62 A1AGB H26 H26 H 0 1 N N N N N N 8.401 18.976 25.782 5.581 -2.092 1.362 H26 A1AGB 63 A1AGB S1 S1 S 0 1 N Y N N N N 9.652 17.654 27.636 5.846 1.304 0.621 S1 A1AGB 64 A1AGB H28 H28 H 0 1 N N N N N N 8.248 17.923 28.742 5.517 -0.027 2.599 H28 A1AGB 65 A1AGB H29 H29 H 0 1 N N N N N N 11.871 28.437 25.142 -4.181 -0.771 -0.284 H29 A1AGB 66 A1AGB H30 H30 H 0 1 N N N N N N 12.229 29.044 23.490 -4.787 -1.032 1.369 H30 A1AGB 67 A1AGB H31 H31 H 0 1 N N N N N N 8.026 30.958 22.982 -7.701 -1.966 -3.098 H31 A1AGB 68 A1AGB H32 H32 H 0 1 N N N N N N 6.418 29.105 23.245 -9.550 -2.565 -1.586 H32 A1AGB 69 A1AGB H33 H33 H 0 1 N N N N N N 9.626 26.494 24.273 -7.205 -1.337 1.763 H33 A1AGB 70 A1AGB H34 H34 H 0 1 N N N N N N 13.035 24.611 22.129 -6.563 3.319 1.463 H34 A1AGB 71 A1AGB H35 H35 H 0 1 N N N N N N 14.570 25.513 22.371 -5.041 3.470 2.395 H35 A1AGB 72 A1AGB H36 H36 H 0 1 N N N N N N 13.471 24.101 24.436 -3.702 3.428 0.456 H36 A1AGB 73 A1AGB H37 H37 H 0 1 N N N N N N 14.227 25.701 24.744 -5.202 4.031 -0.326 H37 A1AGB 74 A1AGB O7 O7 O 0 1 N Y N N N N ? ? ? 5.012 2.079 -0.229 O7 A1AGB 75 A1AGB O8 O8 O 0 1 N Y N N N N ? ? ? 6.639 2.335 1.411 O8 A1AGB 76 A1AGB O9 O9 O 0 1 N Y N N N N ? ? ? 6.836 0.437 0.083 O9 A1AGB 77 A1AGB H27 H27 H 0 1 N N N N N N ? ? ? 7.224 2.881 0.869 H27 A1AGB 78 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1AGB O4 C24 DOUB N N 1 A1AGB C24 C25 SING N N 2 A1AGB C24 N4 SING N N 3 A1AGB C25 C26 SING N N 4 A1AGB C20 C21 DOUB Y N 5 A1AGB C20 C19 SING Y N 6 A1AGB C21 C22 SING Y N 7 A1AGB C19 C18 DOUB Y N 8 A1AGB N4 C17 SING N N 9 A1AGB N4 C16 SING N N 10 A1AGB C22 F1 SING N N 11 A1AGB C22 C23 DOUB Y N 12 A1AGB C18 C23 SING Y N 13 A1AGB C18 C17 SING N N 14 A1AGB O2 C5 DOUB N N 15 A1AGB C26 C16 SING N N 16 A1AGB C16 C15 SING N N 17 A1AGB C5 N1 SING N N 18 A1AGB C5 C4 SING N N 19 A1AGB N1 C6 SING N N 20 A1AGB O5 C14 DOUB N N 21 A1AGB C15 O3 SING N N 22 A1AGB C4 C3 SING N N 23 A1AGB C4 C7 SING N N 24 A1AGB C6 C7 SING N N 25 A1AGB C14 O3 SING N N 26 A1AGB C14 N3 SING N N 27 A1AGB C13 C11 SING N N 28 A1AGB C3 C2 SING N N 29 A1AGB N3 C9 SING N N 30 A1AGB N2 C2 SING N N 31 A1AGB N2 C8 SING N N 32 A1AGB C9 C8 SING N N 33 A1AGB C9 C10 SING N N 34 A1AGB C2 C1 SING N N 35 A1AGB C11 C10 SING N N 36 A1AGB C11 C12 SING N N 37 A1AGB C8 O6 DOUB N N 38 A1AGB C1 O1 SING N N 39 A1AGB C7 H1 SING N N 40 A1AGB C7 H2 SING N N 41 A1AGB C2 H3 SING N N 42 A1AGB C6 H4 SING N N 43 A1AGB C6 H5 SING N N 44 A1AGB N3 H6 SING N N 45 A1AGB N1 H7 SING N N 46 A1AGB C19 H8 SING N N 47 A1AGB C15 H9 SING N N 48 A1AGB C15 H10 SING N N 49 A1AGB C13 H11 SING N N 50 A1AGB C13 H12 SING N N 51 A1AGB C13 H13 SING N N 52 A1AGB C11 H14 SING N N 53 A1AGB C16 H15 SING N N 54 A1AGB C9 H16 SING N N 55 A1AGB C10 H17 SING N N 56 A1AGB C10 H18 SING N N 57 A1AGB N2 H19 SING N N 58 A1AGB O1 H20 SING N N 59 A1AGB C12 H21 SING N N 60 A1AGB C12 H22 SING N N 61 A1AGB C12 H23 SING N N 62 A1AGB C4 H24 SING N N 63 A1AGB C3 H25 SING N N 64 A1AGB C3 H26 SING N N 65 A1AGB C1 S1 SING N N 66 A1AGB C1 H28 SING N N 67 A1AGB C17 H29 SING N N 68 A1AGB C17 H30 SING N N 69 A1AGB C20 H31 SING N N 70 A1AGB C21 H32 SING N N 71 A1AGB C23 H33 SING N N 72 A1AGB C25 H34 SING N N 73 A1AGB C25 H35 SING N N 74 A1AGB C26 H36 SING N N 75 A1AGB C26 H37 SING N N 76 A1AGB S1 O7 DOUB N N 77 A1AGB S1 O8 SING N N 78 A1AGB S1 O9 DOUB N N 79 A1AGB O8 H27 SING N N 80 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1AGB SMILES ACDLabs 12.01 "O=C1NCCC1CC(NC(=O)C(CC(C)C)NC(=O)OCC1CCC(=O)N1Cc1cc(F)ccc1)C(O)S(=O)(=O)O" A1AGB InChI InChI 1.06 "InChI=1S/C26H37FN4O9S/c1-15(2)10-20(24(34)29-21(25(35)41(37,38)39)12-17-8-9-28-23(17)33)30-26(36)40-14-19-6-7-22(32)31(19)13-16-4-3-5-18(27)11-16/h3-5,11,15,17,19-21,25,35H,6-10,12-14H2,1-2H3,(H,28,33)(H,29,34)(H,30,36)(H,37,38,39)/t17-,19-,20-,21-,25+/m0/s1" A1AGB InChIKey InChI 1.06 WUKOFKVFVKFOQQ-SCILSMOKSA-N A1AGB SMILES_CANONICAL CACTVS 3.385 "CC(C)C[C@H](NC(=O)OC[C@@H]1CCC(=O)N1Cc2cccc(F)c2)C(=O)N[C@@H](C[C@@H]3CCNC3=O)[C@H](O)[S](O)(=O)=O" A1AGB SMILES CACTVS 3.385 "CC(C)C[CH](NC(=O)OC[CH]1CCC(=O)N1Cc2cccc(F)c2)C(=O)N[CH](C[CH]3CCNC3=O)[CH](O)[S](O)(=O)=O" A1AGB SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)C[C@@H](C(=O)N[C@@H](C[C@@H]1CCNC1=O)C(O)S(=O)(=O)O)NC(=O)OC[C@@H]2CCC(=O)N2Cc3cccc(c3)F" A1AGB SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)CC(C(=O)NC(CC1CCNC1=O)C(O)S(=O)(=O)O)NC(=O)OCC2CCC(=O)N2Cc3cccc(c3)F" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1AGB "SYSTEMATIC NAME" ACDLabs 12.01 "(1R,2S)-2-({N-[({(2S)-1-[(3-fluorophenyl)methyl]-5-oxopyrrolidin-2-yl}methoxy)carbonyl]-L-leucyl}amino)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid" A1AGB "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{S})-2-[[(2~{S})-2-[[(2~{S})-1-[(3-fluorophenyl)methyl]-5-oxidanylidene-pyrrolidin-2-yl]methoxycarbonylamino]-4-methyl-pentanoyl]amino]-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propane-1-sulfonic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1AGB "Create component" 2024-02-29 RCSB A1AGB "Initial release" 2024-07-10 RCSB A1AGB "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id A1AGB _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C1 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #