data_A1AGE # _chem_comp.id A1AGE _chem_comp.name "(1R,2S)-2-{[N-({[(2S)-1-benzyl-5-oxopyrrolidin-2-yl]methoxy}carbonyl)-L-leucyl]amino}-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H38 N4 O9 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-02-29 _chem_comp.pdbx_modified_date 2024-07-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 582.666 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1AGE _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9ASV _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1AGE C10 C1 C 0 1 N N S N N N 12.105 22.086 26.843 1.192 0.629 -1.108 C10 A1AGE 1 A1AGE C11 C2 C 0 1 N N N N N N 13.240 21.838 27.885 1.751 2.007 -1.471 C11 A1AGE 2 A1AGE C12 C3 C 0 1 N N N N N N 14.612 22.325 27.443 0.815 2.690 -2.469 C12 A1AGE 3 A1AGE C13 C4 C 0 1 N N N N N N 15.125 21.558 26.244 1.306 4.114 -2.736 C13 A1AGE 4 A1AGE C14 C5 C 0 1 N N N N N N 15.669 22.179 28.560 0.803 1.901 -3.780 C14 A1AGE 5 A1AGE C15 C6 C 0 1 N N N N N N 10.756 21.602 27.429 2.174 -0.094 -0.222 C15 A1AGE 6 A1AGE C02 C7 C 0 1 N N N N N N 9.307 28.282 23.089 -4.551 0.361 1.726 C02 A1AGE 7 A1AGE C03 C8 C 0 1 N N N N N N 7.896 27.899 23.328 -4.019 1.768 1.882 C03 A1AGE 8 A1AGE C04 C9 C 0 1 N N N N N N 7.830 27.451 24.759 -4.585 2.525 0.658 C04 A1AGE 9 A1AGE C05 C10 C 0 1 N N S N N N 9.298 27.177 25.188 -4.810 1.375 -0.347 C05 A1AGE 10 A1AGE C06 C11 C 0 1 N N N N N N 9.564 25.658 25.091 -3.589 1.220 -1.257 C06 A1AGE 11 A1AGE C08 C12 C 0 1 N N N N N N 11.014 23.957 25.713 -1.226 0.928 -1.095 C08 A1AGE 12 A1AGE C17 C13 C 0 1 N N S N N N 9.041 19.769 27.592 4.407 -0.958 0.231 C17 A1AGE 13 A1AGE C18 C14 C 0 1 N N N N N N 8.013 19.692 26.391 4.582 -0.071 1.465 C18 A1AGE 14 A1AGE C19 C15 C 0 1 N N S N N N 7.628 21.056 25.777 5.149 1.286 1.042 C19 A1AGE 15 A1AGE C20 C16 C 0 1 N N N N N N 6.677 20.919 24.601 5.323 2.185 2.246 C20 A1AGE 16 A1AGE C22 C17 C 0 1 N N N N N N 5.753 22.643 25.989 7.269 2.405 0.998 C22 A1AGE 17 A1AGE C23 C18 C 0 1 N N N N N N 6.842 21.916 26.793 6.580 1.123 0.480 C23 A1AGE 18 A1AGE C25 C19 C 0 1 N N R N N N 9.266 18.360 28.158 3.924 -2.344 0.663 C25 A1AGE 19 A1AGE C30 C20 C 0 1 N N N N N N 11.532 28.082 24.200 -5.578 -1.081 -0.018 C30 A1AGE 20 A1AGE C31 C21 C 0 1 Y N N N N N 11.968 29.338 24.920 -7.069 -1.054 0.197 C31 A1AGE 21 A1AGE C32 C22 C 0 1 Y N N N N N 12.883 29.230 25.960 -7.900 -0.550 -0.786 C32 A1AGE 22 A1AGE C33 C23 C 0 1 Y N N N N N 13.320 30.347 26.661 -9.268 -0.525 -0.589 C33 A1AGE 23 A1AGE C34 C24 C 0 1 Y N N N N N 12.833 31.607 26.345 -9.805 -1.005 0.591 C34 A1AGE 24 A1AGE C35 C25 C 0 1 Y N N N N N 11.904 31.729 25.311 -8.974 -1.509 1.574 C35 A1AGE 25 A1AGE C36 C26 C 0 1 Y N N N N N 11.477 30.604 24.607 -7.607 -1.539 1.374 C36 A1AGE 26 A1AGE N09 N1 N 0 1 N N N N N N 11.976 23.512 26.551 -0.080 0.789 -0.399 N09 A1AGE 27 A1AGE N16 N2 N 0 1 N N N N N N 10.317 20.322 27.109 3.419 -0.354 -0.667 N16 A1AGE 28 A1AGE N21 N3 N 0 1 N N N N N N 5.628 21.836 24.750 6.520 2.795 2.199 N21 A1AGE 29 A1AGE N29 N4 N 0 1 N N N N N N 10.099 27.841 24.167 -4.992 0.170 0.471 N29 A1AGE 30 A1AGE O01 O1 O 0 1 N N N N N N 9.722 28.857 22.106 -4.573 -0.475 2.605 O01 A1AGE 31 A1AGE O07 O2 O 0 1 N N N N N N 10.821 25.292 25.604 -2.395 1.075 -0.444 O07 A1AGE 32 A1AGE O24 O3 O 0 1 N N N N N N 6.766 20.176 23.662 4.502 2.335 3.126 O24 A1AGE 33 A1AGE O26 O4 O 0 1 N N N N N N 10.121 18.555 29.249 4.878 -2.924 1.554 O26 A1AGE 34 A1AGE O27 O5 O 0 1 N N N N N N 10.086 22.353 28.127 1.843 -0.441 0.892 O27 A1AGE 35 A1AGE O28 O6 O 0 1 N N N N N N 10.309 23.196 25.053 -1.204 0.921 -2.310 O28 A1AGE 36 A1AGE H1 H1 H 0 1 N N N N N N 12.327 21.522 25.925 1.031 0.051 -2.018 H1 A1AGE 37 A1AGE H2 H2 H 0 1 N N N N N N 12.973 22.359 28.816 1.829 2.615 -0.570 H2 A1AGE 38 A1AGE H3 H3 H 0 1 N N N N N N 13.303 20.756 28.075 2.739 1.892 -1.918 H3 A1AGE 39 A1AGE H4 H4 H 0 1 N N N N N N 14.537 23.389 27.175 -0.193 2.725 -2.056 H4 A1AGE 40 A1AGE H5 H5 H 0 1 N N N N N N 16.116 21.941 25.959 2.315 4.079 -3.149 H5 A1AGE 41 A1AGE H6 H6 H 0 1 N N N N N N 15.204 20.491 26.498 0.639 4.601 -3.447 H6 A1AGE 42 A1AGE H7 H7 H 0 1 N N N N N N 14.428 21.684 25.403 1.315 4.677 -1.803 H7 A1AGE 43 A1AGE H8 H8 H 0 1 N N N N N N 15.335 22.724 29.455 0.453 0.886 -3.589 H8 A1AGE 44 A1AGE H9 H9 H 0 1 N N N N N N 15.798 21.115 28.806 0.135 2.388 -4.491 H9 A1AGE 45 A1AGE H10 H10 H 0 1 N N N N N N 16.627 22.594 28.214 1.811 1.866 -4.192 H10 A1AGE 46 A1AGE H11 H11 H 0 1 N N N N N N 7.232 28.761 23.166 -4.385 2.214 2.808 H11 A1AGE 47 A1AGE H12 H12 H 0 1 N N N N N N 7.603 27.079 22.656 -2.930 1.769 1.861 H12 A1AGE 48 A1AGE H13 H13 H 0 1 N N N N N N 7.389 28.239 25.387 -5.525 3.018 0.904 H13 A1AGE 49 A1AGE H14 H14 H 0 1 N N N N N N 7.229 26.534 24.845 -3.859 3.243 0.274 H14 A1AGE 50 A1AGE H15 H15 H 0 1 N N N N N N 9.497 27.557 26.201 -5.702 1.564 -0.944 H15 A1AGE 51 A1AGE H16 H16 H 0 1 N N N N N N 8.785 25.128 25.658 -3.711 0.336 -1.882 H16 A1AGE 52 A1AGE H17 H17 H 0 1 N N N N N N 9.515 25.359 24.033 -3.493 2.102 -1.890 H17 A1AGE 53 A1AGE H18 H18 H 0 1 N N N N N N 8.620 20.414 28.377 5.361 -1.051 -0.288 H18 A1AGE 54 A1AGE H19 H19 H 0 1 N N N N N N 7.094 19.211 26.758 3.616 0.073 1.949 H19 A1AGE 55 A1AGE H20 H20 H 0 1 N N N N N N 8.459 19.074 25.598 5.270 -0.551 2.162 H20 A1AGE 56 A1AGE H21 H21 H 0 1 N N N N N N 8.537 21.591 25.465 4.500 1.755 0.303 H21 A1AGE 57 A1AGE H22 H22 H 0 1 N N N N N N 6.060 23.673 25.756 8.309 2.197 1.253 H22 A1AGE 58 A1AGE H23 H23 H 0 1 N N N N N N 4.803 22.660 26.543 7.216 3.192 0.247 H23 A1AGE 59 A1AGE H24 H24 H 0 1 N N N N N N 6.385 21.275 27.561 7.059 0.232 0.885 H24 A1AGE 60 A1AGE H25 H25 H 0 1 N N N N N N 7.511 22.645 27.274 6.571 1.098 -0.609 H25 A1AGE 61 A1AGE S1 S1 S 0 1 N Y N N N N 9.711 17.717 27.428 3.740 -3.403 -0.799 S1 A1AGE 62 A1AGE H27 H27 H 0 1 N N N N N N 8.294 18.012 28.537 2.963 -2.252 1.169 H27 A1AGE 63 A1AGE H28 H28 H 0 1 N N N N N N 12.008 27.224 24.698 -5.147 -1.921 0.526 H28 A1AGE 64 A1AGE H29 H29 H 0 1 N N N N N N 11.888 28.147 23.161 -5.366 -1.190 -1.082 H29 A1AGE 65 A1AGE H30 H30 H 0 1 N N N N N N 13.263 28.256 26.230 -7.481 -0.175 -1.708 H30 A1AGE 66 A1AGE H31 H31 H 0 1 N N N N N N 14.042 30.234 27.456 -9.918 -0.131 -1.357 H31 A1AGE 67 A1AGE H32 H32 H 0 1 N N N N N N 13.167 32.478 26.890 -10.874 -0.986 0.745 H32 A1AGE 68 A1AGE H33 H33 H 0 1 N N N N N N 11.513 32.702 25.054 -9.394 -1.884 2.496 H33 A1AGE 69 A1AGE H34 H34 H 0 1 N N N N N N 10.757 30.715 23.810 -6.958 -1.937 2.140 H34 A1AGE 70 A1AGE H35 H35 H 0 1 N N N N N N 12.605 24.164 26.975 -0.097 0.795 0.570 H35 A1AGE 71 A1AGE H36 H36 H 0 1 N N N N N N 10.894 19.751 26.525 3.661 -0.143 -1.582 H36 A1AGE 72 A1AGE H37 H37 H 0 1 N N N N N N 4.879 21.935 24.095 6.847 3.412 2.871 H37 A1AGE 73 A1AGE H38 H38 H 0 1 N N N N N N 10.310 17.718 29.658 5.027 -2.410 2.360 H38 A1AGE 74 A1AGE O2 O7 O 0 1 N Y N N N N ? ? ? 2.684 -2.704 -1.643 O2 A1AGE 75 A1AGE O3 O8 O 0 1 N Y N N N N ? ? ? 4.914 -3.358 -1.598 O3 A1AGE 76 A1AGE O1 O9 O 0 1 N Y N N N N ? ? ? 3.141 -4.642 -0.444 O1 A1AGE 77 A1AGE H26 H26 H 0 1 N N N N N N ? ? ? 2.476 -3.160 -2.470 H26 A1AGE 78 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1AGE O01 C02 DOUB N N 1 A1AGE C02 C03 SING N N 2 A1AGE C02 N29 SING N N 3 A1AGE C03 C04 SING N N 4 A1AGE O24 C20 DOUB N N 5 A1AGE N29 C30 SING N N 6 A1AGE N29 C05 SING N N 7 A1AGE C30 C31 SING N N 8 A1AGE C20 N21 SING N N 9 A1AGE C20 C19 SING N N 10 A1AGE C36 C31 DOUB Y N 11 A1AGE C36 C35 SING Y N 12 A1AGE N21 C22 SING N N 13 A1AGE C04 C05 SING N N 14 A1AGE C31 C32 SING Y N 15 A1AGE O28 C08 DOUB N N 16 A1AGE C06 C05 SING N N 17 A1AGE C06 O07 SING N N 18 A1AGE C35 C34 DOUB Y N 19 A1AGE O07 C08 SING N N 20 A1AGE C08 N09 SING N N 21 A1AGE C19 C18 SING N N 22 A1AGE C19 C23 SING N N 23 A1AGE C32 C33 DOUB Y N 24 A1AGE C22 C23 SING N N 25 A1AGE C13 C12 SING N N 26 A1AGE C34 C33 SING Y N 27 A1AGE C18 C17 SING N N 28 A1AGE N09 C10 SING N N 29 A1AGE C10 C15 SING N N 30 A1AGE C10 C11 SING N N 31 A1AGE N16 C15 SING N N 32 A1AGE N16 C17 SING N N 33 A1AGE C15 O27 DOUB N N 34 A1AGE C12 C11 SING N N 35 A1AGE C12 C14 SING N N 36 A1AGE C17 C25 SING N N 37 A1AGE C25 O26 SING N N 38 A1AGE C10 H1 SING N N 39 A1AGE C11 H2 SING N N 40 A1AGE C11 H3 SING N N 41 A1AGE C12 H4 SING N N 42 A1AGE C13 H5 SING N N 43 A1AGE C13 H6 SING N N 44 A1AGE C13 H7 SING N N 45 A1AGE C14 H8 SING N N 46 A1AGE C14 H9 SING N N 47 A1AGE C14 H10 SING N N 48 A1AGE C03 H11 SING N N 49 A1AGE C03 H12 SING N N 50 A1AGE C04 H13 SING N N 51 A1AGE C04 H14 SING N N 52 A1AGE C05 H15 SING N N 53 A1AGE C06 H16 SING N N 54 A1AGE C06 H17 SING N N 55 A1AGE C17 H18 SING N N 56 A1AGE C18 H19 SING N N 57 A1AGE C18 H20 SING N N 58 A1AGE C19 H21 SING N N 59 A1AGE C22 H22 SING N N 60 A1AGE C22 H23 SING N N 61 A1AGE C23 H24 SING N N 62 A1AGE C23 H25 SING N N 63 A1AGE C25 S1 SING N N 64 A1AGE C25 H27 SING N N 65 A1AGE C30 H28 SING N N 66 A1AGE C30 H29 SING N N 67 A1AGE C32 H30 SING N N 68 A1AGE C33 H31 SING N N 69 A1AGE C34 H32 SING N N 70 A1AGE C35 H33 SING N N 71 A1AGE C36 H34 SING N N 72 A1AGE N09 H35 SING N N 73 A1AGE N16 H36 SING N N 74 A1AGE N21 H37 SING N N 75 A1AGE O26 H38 SING N N 76 A1AGE S1 O2 SING N N 77 A1AGE S1 O3 DOUB N N 78 A1AGE S1 O1 DOUB N N 79 A1AGE O2 H26 SING N N 80 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1AGE SMILES ACDLabs 12.01 "O=C1NCCC1CC(NC(=O)C(CC(C)C)NC(=O)OCC1CCC(=O)N1Cc1ccccc1)C(O)S(=O)(=O)O" A1AGE InChI InChI 1.06 "InChI=1S/C26H38N4O9S/c1-16(2)12-20(24(33)28-21(25(34)40(36,37)38)13-18-10-11-27-23(18)32)29-26(35)39-15-19-8-9-22(31)30(19)14-17-6-4-3-5-7-17/h3-7,16,18-21,25,34H,8-15H2,1-2H3,(H,27,32)(H,28,33)(H,29,35)(H,36,37,38)/t18-,19-,20-,21-,25+/m0/s1" A1AGE InChIKey InChI 1.06 AUDFKQBBLRSAHE-ROYUMMMZSA-N A1AGE SMILES_CANONICAL CACTVS 3.385 "CC(C)C[C@H](NC(=O)OC[C@@H]1CCC(=O)N1Cc2ccccc2)C(=O)N[C@@H](C[C@@H]3CCNC3=O)[C@H](O)[S](O)(=O)=O" A1AGE SMILES CACTVS 3.385 "CC(C)C[CH](NC(=O)OC[CH]1CCC(=O)N1Cc2ccccc2)C(=O)N[CH](C[CH]3CCNC3=O)[CH](O)[S](O)(=O)=O" A1AGE SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)C[C@@H](C(=O)N[C@@H](C[C@@H]1CCNC1=O)C(O)S(=O)(=O)O)NC(=O)OC[C@@H]2CCC(=O)N2Cc3ccccc3" A1AGE SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)CC(C(=O)NC(CC1CCNC1=O)C(O)S(=O)(=O)O)NC(=O)OCC2CCC(=O)N2Cc3ccccc3" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1AGE "SYSTEMATIC NAME" ACDLabs 12.01 "(1R,2S)-2-{[N-({[(2S)-1-benzyl-5-oxopyrrolidin-2-yl]methoxy}carbonyl)-L-leucyl]amino}-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid" A1AGE "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{S})-2-[[(2~{S})-4-methyl-2-[[(2~{S})-5-oxidanylidene-1-(phenylmethyl)pyrrolidin-2-yl]methoxycarbonylamino]pentanoyl]amino]-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propane-1-sulfonic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1AGE "Create component" 2024-02-29 RCSB A1AGE "Initial release" 2024-07-10 RCSB #