data_A1AGG # _chem_comp.id A1AGG _chem_comp.name "(1S,2S)-1-hydroxy-2-{[N-({[(2S)-5-oxo-1-(2-phenylethyl)pyrrolidin-2-yl]methoxy}carbonyl)-L-leucyl]amino}-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H40 N4 O9 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-02-29 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 596.693 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1AGG _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9ASZ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1AGG C1 C1 C 0 1 N N N N N N 10.751 23.970 25.833 -1.667 2.055 -0.900 C1 A1AGG 1 A1AGG C2 C2 C 0 1 N N N N N N 9.370 25.726 25.142 -4.045 2.260 -0.894 C2 A1AGG 2 A1AGG C3 C3 C 0 1 N N S N N N 9.151 27.232 25.135 -5.195 2.461 0.095 C3 A1AGG 3 A1AGG C4 C4 C 0 1 N N N N N N 11.619 27.765 24.699 -5.180 -0.083 0.595 C4 A1AGG 4 A1AGG C5 C5 C 0 1 N N N N N N 12.001 28.307 26.083 -6.571 -0.619 0.253 C5 A1AGG 5 A1AGG C6 C6 C 0 1 Y N N N N N 11.715 29.782 26.158 -6.464 -2.060 -0.174 C6 A1AGG 6 A1AGG C10 C7 C 0 1 Y N N N N N 10.165 31.608 26.472 -6.463 -4.391 0.375 C10 A1AGG 7 A1AGG C11 C8 C 0 1 Y N N N N N 10.432 30.248 26.431 -6.561 -3.069 0.766 C11 A1AGG 8 A1AGG C12 C9 C 0 1 N N N N N N 9.741 28.849 23.511 -5.472 1.721 2.278 C12 A1AGG 9 A1AGG C13 C10 C 0 1 N N N N N N 8.253 28.945 23.699 -5.521 3.234 2.341 C13 A1AGG 10 A1AGG C14 C11 C 0 1 N N N N N N 7.897 27.620 24.335 -4.920 3.689 0.991 C14 A1AGG 11 A1AGG C15 C12 C 0 1 N N S N N N 11.905 22.202 27.072 0.741 1.720 -1.069 C15 A1AGG 12 A1AGG C16 C13 C 0 1 N N N N N N 13.037 22.013 28.077 1.233 2.998 -1.752 C16 A1AGG 13 A1AGG C17 C14 C 0 1 N N N N N N 14.396 22.501 27.604 2.462 2.678 -2.606 C17 A1AGG 14 A1AGG C18 C15 C 0 1 N N N N N N 15.405 22.448 28.760 2.057 1.753 -3.755 C18 A1AGG 15 A1AGG C19 C16 C 0 1 N N N N N N 14.888 21.706 26.417 3.038 3.976 -3.175 C19 A1AGG 16 A1AGG C20 C17 C 0 1 N N N N N N 10.596 21.686 27.662 1.815 1.196 -0.151 C20 A1AGG 17 A1AGG C21 C18 C 0 1 N N S N N N 8.884 19.933 27.626 3.798 -0.159 0.259 C21 A1AGG 18 A1AGG C22 C19 C 0 1 N N N N N N 7.898 19.822 26.451 4.286 -1.485 -0.328 C22 A1AGG 19 A1AGG C23 C20 C 0 1 N N S N N N 7.464 21.159 25.842 3.102 -2.444 -0.476 C23 A1AGG 20 A1AGG C24 C21 C 0 1 N N N N N N 6.541 21.033 24.635 3.559 -3.763 -1.058 C24 A1AGG 21 A1AGG C25 C22 C 0 1 N N N N N N 5.730 22.838 25.888 2.143 -4.299 0.703 C25 A1AGG 22 A1AGG C26 C23 C 0 1 N N N N N N 6.679 22.059 26.804 2.533 -2.818 0.912 C26 A1AGG 23 A1AGG C27 C24 C 0 1 N N S N N N 9.160 18.598 28.269 4.986 0.790 0.431 C27 A1AGG 24 A1AGG C7 C25 C 0 1 Y N N N N N 12.715 30.714 25.903 -6.275 -2.374 -1.507 C7 A1AGG 25 A1AGG C8 C26 C 0 1 Y N N N N N 12.445 32.075 25.954 -6.177 -3.696 -1.899 C8 A1AGG 26 A1AGG C9 C27 C 0 1 Y N N N N N 11.172 32.519 26.237 -6.267 -4.704 -0.957 C9 A1AGG 27 A1AGG N1 N1 N 0 1 N N N N N N 10.207 27.967 24.427 -5.284 1.318 1.010 N1 A1AGG 28 A1AGG N2 N2 N 0 1 N N N N N N 11.699 23.590 26.711 -0.465 2.016 -0.291 N2 A1AGG 29 A1AGG N3 N3 N 0 1 N N N N N N 10.166 20.501 27.217 2.818 0.444 -0.647 N3 A1AGG 30 A1AGG N4 N4 N 0 1 N N N N N N 5.597 21.963 24.732 3.011 -4.784 -0.376 N4 A1AGG 31 A1AGG O1 O1 O 0 1 N N N N N N 10.080 23.210 25.158 -1.741 1.931 -2.107 O1 A1AGG 32 A1AGG O2 O2 O 0 1 N N N N N N 10.540 25.302 25.885 -2.786 2.227 -0.171 O2 A1AGG 33 A1AGG O3 O3 O 0 1 N N N N N N 10.412 29.510 22.717 -5.586 0.982 3.233 O3 A1AGG 34 A1AGG O4 O4 O 0 1 N N N N N N 6.658 20.209 23.712 4.310 -3.883 -2.003 O4 A1AGG 35 A1AGG O5 O5 O 0 1 N N N N N N 7.933 18.050 28.737 4.516 2.064 0.876 O5 A1AGG 36 A1AGG O6 O6 O 0 1 N N N N N N 9.988 22.362 28.497 1.776 1.449 1.035 O6 A1AGG 37 A1AGG H1 H1 H 0 1 N N N N N N 8.485 25.250 25.590 -4.183 1.319 -1.426 H1 A1AGG 38 A1AGG H2 H2 H 0 1 N N N N N N 9.481 25.388 24.101 -4.032 3.083 -1.609 H2 A1AGG 39 A1AGG H3 H3 H 0 1 N N N N N N 9.055 27.597 26.168 -6.135 2.589 -0.442 H3 A1AGG 40 A1AGG H4 H4 H 0 1 N N N N N N 11.841 26.688 24.662 -4.754 -0.672 1.407 H4 A1AGG 41 A1AGG H5 H5 H 0 1 N N N N N N 12.210 28.288 23.933 -4.537 -0.156 -0.282 H5 A1AGG 42 A1AGG H6 H6 H 0 1 N N N N N N 11.415 27.783 26.853 -7.214 -0.547 1.130 H6 A1AGG 43 A1AGG H7 H7 H 0 1 N N N N N N 13.073 28.135 26.258 -6.997 -0.030 -0.560 H7 A1AGG 44 A1AGG H8 H8 H 0 1 N N N N N N 9.165 31.954 26.689 -6.538 -5.179 1.109 H8 A1AGG 45 A1AGG H9 H9 H 0 1 N N N N N N 9.635 29.542 26.613 -6.713 -2.823 1.807 H9 A1AGG 46 A1AGG H10 H10 H 0 1 N N N N N N 7.993 29.783 24.362 -6.551 3.579 2.436 H10 A1AGG 47 A1AGG H11 H11 H 0 1 N N N N N N 7.741 29.069 22.733 -4.917 3.601 3.171 H11 A1AGG 48 A1AGG H12 H12 H 0 1 N N N N N N 7.028 27.729 25.001 -3.850 3.874 1.083 H12 A1AGG 49 A1AGG H13 H13 H 0 1 N N N N N N 7.677 26.865 23.566 -5.436 4.571 0.612 H13 A1AGG 50 A1AGG H14 H14 H 0 1 N N N N N N 12.137 21.617 26.170 0.511 0.969 -1.825 H14 A1AGG 51 A1AGG H15 H15 H 0 1 N N N N N N 12.776 22.562 28.994 0.443 3.398 -2.387 H15 A1AGG 52 A1AGG H16 H16 H 0 1 N N N N N N 13.118 20.940 28.303 1.499 3.735 -0.995 H16 A1AGG 53 A1AGG H17 H17 H 0 1 N N N N N N 14.292 23.551 27.294 3.214 2.186 -1.990 H17 A1AGG 54 A1AGG H18 H18 H 0 1 N N N N N N 15.022 23.034 29.609 1.354 2.270 -4.408 H18 A1AGG 55 A1AGG H19 H19 H 0 1 N N N N N N 15.551 21.403 29.072 2.943 1.472 -4.325 H19 A1AGG 56 A1AGG H20 H20 H 0 1 N N N N N N 16.365 22.869 28.428 1.587 0.856 -3.351 H20 A1AGG 57 A1AGG H21 H21 H 0 1 N N N N N N 15.871 22.086 26.103 3.326 4.636 -2.357 H21 A1AGG 58 A1AGG H22 H22 H 0 1 N N N N N N 14.977 20.646 26.697 3.914 3.749 -3.784 H22 A1AGG 59 A1AGG H23 H23 H 0 1 N N N N N N 14.174 21.807 25.587 2.286 4.469 -3.791 H23 A1AGG 60 A1AGG H24 H24 H 0 1 N N N N N N 8.432 20.591 28.383 3.334 -0.340 1.229 H24 A1AGG 61 A1AGG H25 H25 H 0 1 N N N N N N 6.997 19.302 26.809 4.734 -1.307 -1.306 H25 A1AGG 62 A1AGG H26 H26 H 0 1 N N N N N N 8.376 19.226 25.660 5.029 -1.926 0.337 H26 A1AGG 63 A1AGG H27 H27 H 0 1 N N N N N N 8.368 21.701 25.528 2.327 -1.997 -1.099 H27 A1AGG 64 A1AGG H28 H28 H 0 1 N N N N N N 6.164 23.807 25.602 2.321 -4.868 1.616 H28 A1AGG 65 A1AGG H29 H29 H 0 1 N N N N N N 4.757 23.001 26.374 1.096 -4.375 0.410 H29 A1AGG 66 A1AGG H30 H30 H 0 1 N N N N N N 6.115 21.457 27.531 3.294 -2.721 1.686 H30 A1AGG 67 A1AGG H31 H31 H 0 1 N N N N N N 7.354 22.742 27.340 1.657 -2.214 1.151 H31 A1AGG 68 A1AGG H32 H32 H 0 1 N N N N N N 9.797 18.792 29.144 5.500 0.905 -0.523 H32 A1AGG 69 A1AGG S1 S1 S 0 1 N Y N N N N 9.597 17.937 27.550 6.133 0.106 1.658 S1 A1AGG 70 A1AGG H34 H34 H 0 1 N N N N N N 13.712 30.376 25.663 -6.204 -1.586 -2.243 H34 A1AGG 71 A1AGG H35 H35 H 0 1 N N N N N N 13.235 32.788 25.771 -6.029 -3.941 -2.940 H35 A1AGG 72 A1AGG H36 H36 H 0 1 N N N N N N 10.964 33.578 26.275 -6.191 -5.737 -1.263 H36 A1AGG 73 A1AGG H37 H37 H 0 1 N N N N N N 12.280 24.289 27.128 -0.399 2.183 0.662 H37 A1AGG 74 A1AGG H38 H38 H 0 1 N N N N N N 10.742 19.986 26.582 2.891 0.303 -1.604 H38 A1AGG 75 A1AGG H39 H39 H 0 1 N N N N N N 4.857 22.054 24.066 3.170 -5.720 -0.571 H39 A1AGG 76 A1AGG H40 H40 H 0 1 N N N N N N 8.097 17.208 29.144 3.897 2.490 0.267 H40 A1AGG 77 A1AGG O7 O7 O 0 1 N Y N N N N ? ? ? 5.420 -0.429 2.764 O7 A1AGG 78 A1AGG O9 O9 O 0 1 N Y N N N N ? ? ? 6.737 -1.113 0.975 O9 A1AGG 79 A1AGG O8 O8 O 0 1 N Y N N N N ? ? ? 7.236 0.981 1.852 O8 A1AGG 80 A1AGG H33 H33 H 0 1 N N N N N N ? ? ? 7.380 -1.589 1.518 H33 A1AGG 81 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1AGG O3 C12 DOUB N N 1 A1AGG C12 C13 SING N N 2 A1AGG C12 N1 SING N N 3 A1AGG C13 C14 SING N N 4 A1AGG O4 C24 DOUB N N 5 A1AGG C14 C3 SING N N 6 A1AGG N1 C4 SING N N 7 A1AGG N1 C3 SING N N 8 A1AGG C24 N4 SING N N 9 A1AGG C24 C23 SING N N 10 A1AGG C4 C5 SING N N 11 A1AGG N4 C25 SING N N 12 A1AGG C3 C2 SING N N 13 A1AGG C2 O2 SING N N 14 A1AGG O1 C1 DOUB N N 15 A1AGG C1 O2 SING N N 16 A1AGG C1 N2 SING N N 17 A1AGG C23 C22 SING N N 18 A1AGG C23 C26 SING N N 19 A1AGG C25 C26 SING N N 20 A1AGG C7 C8 DOUB Y N 21 A1AGG C7 C6 SING Y N 22 A1AGG C8 C9 SING Y N 23 A1AGG C5 C6 SING N N 24 A1AGG C6 C11 DOUB Y N 25 A1AGG C9 C10 DOUB Y N 26 A1AGG C19 C17 SING N N 27 A1AGG C11 C10 SING Y N 28 A1AGG C22 C21 SING N N 29 A1AGG N2 C15 SING N N 30 A1AGG C15 C20 SING N N 31 A1AGG C15 C16 SING N N 32 A1AGG N3 C21 SING N N 33 A1AGG N3 C20 SING N N 34 A1AGG C17 C16 SING N N 35 A1AGG C17 C18 SING N N 36 A1AGG C21 C27 SING N N 37 A1AGG C20 O6 DOUB N N 38 A1AGG C27 O5 SING N N 39 A1AGG C2 H1 SING N N 40 A1AGG C2 H2 SING N N 41 A1AGG C3 H3 SING N N 42 A1AGG C4 H4 SING N N 43 A1AGG C4 H5 SING N N 44 A1AGG C5 H6 SING N N 45 A1AGG C5 H7 SING N N 46 A1AGG C10 H8 SING N N 47 A1AGG C11 H9 SING N N 48 A1AGG C13 H10 SING N N 49 A1AGG C13 H11 SING N N 50 A1AGG C14 H12 SING N N 51 A1AGG C14 H13 SING N N 52 A1AGG C15 H14 SING N N 53 A1AGG C16 H15 SING N N 54 A1AGG C16 H16 SING N N 55 A1AGG C17 H17 SING N N 56 A1AGG C18 H18 SING N N 57 A1AGG C18 H19 SING N N 58 A1AGG C18 H20 SING N N 59 A1AGG C19 H21 SING N N 60 A1AGG C19 H22 SING N N 61 A1AGG C19 H23 SING N N 62 A1AGG C21 H24 SING N N 63 A1AGG C22 H25 SING N N 64 A1AGG C22 H26 SING N N 65 A1AGG C23 H27 SING N N 66 A1AGG C25 H28 SING N N 67 A1AGG C25 H29 SING N N 68 A1AGG C26 H30 SING N N 69 A1AGG C26 H31 SING N N 70 A1AGG C27 H32 SING N N 71 A1AGG C27 S1 SING N N 72 A1AGG C7 H34 SING N N 73 A1AGG C8 H35 SING N N 74 A1AGG C9 H36 SING N N 75 A1AGG N2 H37 SING N N 76 A1AGG N3 H38 SING N N 77 A1AGG N4 H39 SING N N 78 A1AGG O5 H40 SING N N 79 A1AGG S1 O7 DOUB N N 80 A1AGG S1 O9 SING N N 81 A1AGG S1 O8 DOUB N N 82 A1AGG O9 H33 SING N N 83 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1AGG SMILES ACDLabs 12.01 "O=C1NCCC1CC(NC(=O)C(CC(C)C)NC(=O)OCC1CCC(=O)N1CCc1ccccc1)C(O)S(=O)(=O)O" A1AGG InChI InChI 1.06 "InChI=1S/C27H40N4O9S/c1-17(2)14-21(25(34)29-22(26(35)41(37,38)39)15-19-10-12-28-24(19)33)30-27(36)40-16-20-8-9-23(32)31(20)13-11-18-6-4-3-5-7-18/h3-7,17,19-22,26,35H,8-16H2,1-2H3,(H,28,33)(H,29,34)(H,30,36)(H,37,38,39)/t19-,20-,21-,22-,26-/m0/s1" A1AGG InChIKey InChI 1.06 FDODUQVFBIGMCE-KAWFJRQCSA-N A1AGG SMILES_CANONICAL CACTVS 3.385 "CC(C)C[C@H](NC(=O)OC[C@@H]1CCC(=O)N1CCc2ccccc2)C(=O)N[C@@H](C[C@@H]3CCNC3=O)[C@@H](O)[S](O)(=O)=O" A1AGG SMILES CACTVS 3.385 "CC(C)C[CH](NC(=O)OC[CH]1CCC(=O)N1CCc2ccccc2)C(=O)N[CH](C[CH]3CCNC3=O)[CH](O)[S](O)(=O)=O" A1AGG SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)C[C@@H](C(=O)N[C@@H](C[C@@H]1CCNC1=O)C(O)S(=O)(=O)O)NC(=O)OC[C@@H]2CCC(=O)N2CCc3ccccc3" A1AGG SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)CC(C(=O)NC(CC1CCNC1=O)C(O)S(=O)(=O)O)NC(=O)OCC2CCC(=O)N2CCc3ccccc3" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1AGG "SYSTEMATIC NAME" ACDLabs 12.01 "(1S,2S)-1-hydroxy-2-{[N-({[(2S)-5-oxo-1-(2-phenylethyl)pyrrolidin-2-yl]methoxy}carbonyl)-L-leucyl]amino}-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid" A1AGG "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{S})-2-[[(2~{S})-4-methyl-2-[[(2~{S})-5-oxidanylidene-1-(2-phenylethyl)pyrrolidin-2-yl]methoxycarbonylamino]pentanoyl]amino]-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propane-1-sulfonic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1AGG "Create component" 2024-02-29 RCSB A1AGG "Other modification" 2024-02-29 RCSB A1AGG "Initial release" 2024-07-10 RCSB A1AGG "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id A1AGG _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C27 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #