data_A1AGK # _chem_comp.id A1AGK _chem_comp.name "(1R,2S)-2-{[N-({[(2S)-1-(2-cyclohexylethyl)-5-oxopyrrolidin-2-yl]methoxy}carbonyl)-L-leucyl]amino}-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H46 N4 O9 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-02-29 _chem_comp.pdbx_modified_date 2024-07-05 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 602.741 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1AGK _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9AT3 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1AGK C18 C1 C 0 1 N N N N N N 15.044 21.644 26.267 2.031 3.458 -3.127 C18 A1AGK 1 A1AGK C27 C2 C 0 1 N N R N N N 9.368 18.379 28.263 4.826 0.144 2.118 C27 A1AGK 2 A1AGK C26 C3 C 0 1 N N N N N N 6.838 21.861 26.987 5.084 -4.402 0.006 C26 A1AGK 3 A1AGK C23 C4 C 0 1 N N S N N N 7.620 21.026 25.979 4.149 -3.240 0.417 C23 A1AGK 4 A1AGK C12 C5 C 0 1 N N N N N N 9.871 28.515 23.582 -5.289 2.371 1.538 C12 A1AGK 5 A1AGK C11 C6 C 0 1 N N N N N N 12.041 29.962 27.934 -6.460 -2.326 1.226 C11 A1AGK 6 A1AGK C10 C7 C 0 1 N N N N N N 11.567 31.371 28.282 -6.562 -3.850 1.147 C10 A1AGK 7 A1AGK C13 C8 C 0 1 N N N N N N 8.413 28.182 23.483 -5.068 3.842 1.263 C13 A1AGK 8 A1AGK C14 C9 C 0 1 N N N N N N 8.085 27.529 24.824 -4.210 3.862 -0.023 C14 A1AGK 9 A1AGK C7 C10 C 0 1 N N N N N N 12.322 30.638 25.550 -7.967 -2.121 -0.756 C7 A1AGK 10 A1AGK C2 C11 C 0 1 N N N N N N 9.588 25.500 25.160 -3.356 1.906 -1.367 C2 A1AGK 11 A1AGK C21 C12 C 0 1 N N S N N N 9.080 19.736 27.647 4.014 -0.978 1.469 C21 A1AGK 12 A1AGK C3 C13 C 0 1 N N S N N N 9.431 27.003 25.332 -4.577 2.508 -0.669 C3 A1AGK 13 A1AGK C4 C14 C 0 1 N N N N N N 11.829 27.674 24.771 -5.099 0.187 0.366 C4 A1AGK 14 A1AGK C5 C15 C 0 1 N N N N N N 12.212 28.180 26.152 -6.504 -0.206 -0.097 C5 A1AGK 15 A1AGK C6 C16 C 0 1 N N N N N N 11.734 29.591 26.488 -6.606 -1.731 -0.176 C6 A1AGK 16 A1AGK C9 C17 C 0 1 N N N N N N 12.148 32.399 27.329 -7.923 -4.240 0.566 C9 A1AGK 17 A1AGK C8 C18 C 0 1 N N N N N N 11.828 32.045 25.888 -8.069 -3.646 -0.836 C8 A1AGK 18 A1AGK C1 C19 C 0 1 N N N N N N 10.915 23.711 25.980 -1.089 1.330 -0.893 C1 A1AGK 19 A1AGK O1 O1 O 0 1 N N N N N N 10.249 22.909 25.367 -1.007 0.952 -2.045 O1 A1AGK 20 A1AGK O3 O2 O 0 1 N N N N N N 10.493 29.298 22.869 -5.675 1.911 2.592 O3 A1AGK 21 A1AGK O4 O3 O 0 1 N N N N N N 6.819 20.163 23.834 2.440 -2.185 -0.934 O4 A1AGK 22 A1AGK C15 C20 C 0 1 N N S N N N 12.135 21.994 27.181 1.240 0.686 -0.578 C15 A1AGK 23 A1AGK C17 C21 C 0 1 N N N N N N 14.662 22.387 27.532 1.291 2.271 -2.509 C17 A1AGK 24 A1AGK C19 C22 C 0 1 N N N N N N 15.772 22.285 28.576 1.210 1.133 -3.528 C19 A1AGK 25 A1AGK C20 C23 C 0 1 N N N N N N 10.910 21.369 27.852 2.037 0.129 0.573 C20 A1AGK 26 A1AGK C22 C24 C 0 1 N N N N N N 8.084 19.658 26.483 4.964 -2.062 0.954 C22 A1AGK 27 A1AGK C16 C25 C 0 1 N N N N N N 13.344 21.867 28.102 2.044 1.791 -1.267 C16 A1AGK 28 A1AGK C24 C26 C 0 1 N N N N N N 6.680 20.928 24.794 3.447 -2.857 -0.867 C24 A1AGK 29 A1AGK C25 C27 C 0 1 N N N N N N 5.834 22.635 26.141 5.288 -4.125 -1.500 C25 A1AGK 30 A1AGK N1 N1 N 0 1 N N N N N N 10.402 27.751 24.528 -5.002 1.647 0.442 N1 A1AGK 31 A1AGK N2 N2 N 0 1 N N N N N N 11.901 23.384 26.829 -0.020 1.240 -0.076 N2 A1AGK 32 A1AGK N3 N3 N 0 1 N N N N N N 10.331 20.355 27.208 3.240 -0.436 0.350 N3 A1AGK 33 A1AGK N4 N4 N 0 1 N N N N N N 5.698 21.806 24.947 4.102 -3.369 -1.923 N4 A1AGK 34 A1AGK O2 O4 O 0 1 N N N N N N 10.710 25.050 25.957 -2.247 1.839 -0.432 O2 A1AGK 35 A1AGK O5 O5 O 0 1 N N N N N N 10.239 18.490 29.374 3.937 1.099 2.701 O5 A1AGK 36 A1AGK O6 O6 O 0 1 N N N N N N 10.504 21.792 28.935 1.595 0.188 1.702 O6 A1AGK 37 A1AGK H1 H1 H 0 1 N N N N N N 15.995 22.040 25.881 3.039 3.151 -3.409 H1 A1AGK 38 A1AGK H2 H2 H 0 1 N N N N N N 15.157 20.573 26.491 1.495 3.800 -4.012 H2 A1AGK 39 A1AGK H3 H3 H 0 1 N N N N N N 14.257 21.779 25.511 2.089 4.269 -2.401 H3 A1AGK 40 A1AGK S1 S1 S 0 1 N Y N N N N 9.795 17.729 27.529 5.847 0.959 0.860 S1 A1AGK 41 A1AGK H5 H5 H 0 1 N N N N N N 8.404 18.013 28.646 5.469 -0.274 2.893 H5 A1AGK 42 A1AGK H6 H6 H 0 1 N N N N N N 6.320 21.214 27.710 6.031 -4.350 0.544 H6 A1AGK 43 A1AGK H7 H7 H 0 1 N N N N N N 7.507 22.549 27.524 4.601 -5.366 0.163 H7 A1AGK 44 A1AGK H8 H8 H 0 1 N N N N N N 8.508 21.598 25.672 3.429 -3.576 1.163 H8 A1AGK 45 A1AGK H9 H9 H 0 1 N N N N N N 11.537 29.245 28.598 -7.252 -1.941 1.868 H9 A1AGK 46 A1AGK H10 H10 H 0 1 N N N N N N 13.128 29.905 28.091 -5.490 -2.047 1.639 H10 A1AGK 47 A1AGK H11 H11 H 0 1 N N N N N N 11.884 31.613 29.307 -5.769 -4.234 0.505 H11 A1AGK 48 A1AGK H12 H12 H 0 1 N N N N N N 10.469 31.405 28.220 -6.458 -4.274 2.145 H12 A1AGK 49 A1AGK H13 H13 H 0 1 N N N N N N 7.814 29.093 23.336 -6.020 4.346 1.094 H13 A1AGK 50 A1AGK H14 H14 H 0 1 N N N N N N 8.228 27.484 22.654 -4.530 4.307 2.088 H14 A1AGK 51 A1AGK H15 H15 H 0 1 N N N N N N 7.666 28.267 25.524 -4.495 4.692 -0.669 H15 A1AGK 52 A1AGK H16 H16 H 0 1 N N N N N N 7.370 26.704 24.690 -3.147 3.905 0.217 H16 A1AGK 53 A1AGK H17 H17 H 0 1 N N N N N N 12.029 30.396 24.518 -8.759 -1.737 -0.114 H17 A1AGK 54 A1AGK H18 H18 H 0 1 N N N N N N 13.419 30.616 25.634 -8.071 -1.698 -1.755 H18 A1AGK 55 A1AGK H19 H19 H 0 1 N N N N N N 8.671 24.993 25.494 -3.596 0.902 -1.719 H19 A1AGK 56 A1AGK H20 H20 H 0 1 N N N N N N 9.771 25.267 24.101 -3.078 2.531 -2.216 H20 A1AGK 57 A1AGK H21 H21 H 0 1 N N N N N N 8.632 20.370 28.426 3.336 -1.409 2.205 H21 A1AGK 58 A1AGK H22 H22 H 0 1 N N N N N N 9.542 27.261 26.395 -5.392 2.638 -1.380 H22 A1AGK 59 A1AGK H23 H23 H 0 1 N N N N N N 12.146 26.625 24.679 -4.907 -0.241 1.349 H23 A1AGK 60 A1AGK H24 H24 H 0 1 N N N N N N 12.349 28.282 24.016 -4.364 -0.189 -0.345 H24 A1AGK 61 A1AGK H25 H25 H 0 1 N N N N N N 11.786 27.491 26.896 -7.239 0.170 0.614 H25 A1AGK 62 A1AGK H26 H26 H 0 1 N N N N N N 13.309 28.167 26.226 -6.696 0.222 -1.080 H26 A1AGK 63 A1AGK H27 H27 H 0 1 N N N N N N 10.641 29.610 26.364 -5.813 -2.115 -0.818 H27 A1AGK 64 A1AGK H28 H28 H 0 1 N N N N N N 13.240 32.432 27.458 -7.995 -5.327 0.510 H28 A1AGK 65 A1AGK H29 H29 H 0 1 N N N N N N 11.721 33.386 27.560 -8.715 -3.856 1.208 H29 A1AGK 66 A1AGK H30 H30 H 0 1 N N N N N N 12.319 32.769 25.221 -9.038 -3.924 -1.249 H30 A1AGK 67 A1AGK H31 H31 H 0 1 N N N N N N 10.739 32.090 25.739 -7.276 -4.030 -1.478 H31 A1AGK 68 A1AGK H32 H32 H 0 1 N N N N N N 12.346 21.425 26.264 1.029 -0.109 -1.292 H32 A1AGK 69 A1AGK H33 H33 H 0 1 N N N N N N 14.528 23.449 27.279 0.284 2.578 -2.227 H33 A1AGK 70 A1AGK H34 H34 H 0 1 N N N N N N 15.474 22.830 29.484 2.217 0.826 -3.810 H34 A1AGK 71 A1AGK H35 H35 H 0 1 N N N N N N 15.946 21.228 28.824 0.682 0.287 -3.087 H35 A1AGK 72 A1AGK H36 H36 H 0 1 N N N N N N 16.696 22.724 28.172 0.673 1.475 -4.413 H36 A1AGK 73 A1AGK H37 H37 H 0 1 N N N N N N 7.201 19.094 26.818 5.602 -2.403 1.769 H37 A1AGK 74 A1AGK H38 H38 H 0 1 N N N N N N 8.565 19.125 25.649 5.582 -1.653 0.155 H38 A1AGK 75 A1AGK H39 H39 H 0 1 N N N N N N 13.129 22.428 29.023 2.179 2.625 -0.578 H39 A1AGK 76 A1AGK H40 H40 H 0 1 N N N N N N 13.476 20.802 28.343 3.019 1.401 -1.561 H40 A1AGK 77 A1AGK H41 H41 H 0 1 N N N N N N 6.219 23.634 25.887 6.189 -3.531 -1.656 H41 A1AGK 78 A1AGK H42 H42 H 0 1 N N N N N N 4.871 22.735 26.664 5.356 -5.063 -2.050 H42 A1AGK 79 A1AGK H43 H43 H 0 1 N N N N N N 12.478 24.101 27.221 -0.086 1.542 0.843 H43 A1AGK 80 A1AGK H44 H44 H 0 1 N N N N N N 10.774 20.000 26.384 3.593 -0.483 -0.553 H44 A1AGK 81 A1AGK H45 H45 H 0 1 N N N N N N 4.936 21.892 24.305 3.827 -3.255 -2.846 H45 A1AGK 82 A1AGK H46 H46 H 0 1 N N N N N N 10.401 17.627 29.738 3.333 1.512 2.069 H46 A1AGK 83 A1AGK O8 O8 O 0 1 N Y N N N N ? ? ? 6.596 2.043 1.622 O8 A1AGK 84 A1AGK O7 O7 O 0 1 N Y N N N N ? ? ? 6.867 0.083 0.402 O7 A1AGK 85 A1AGK O9 O9 O 0 1 N Y N N N N ? ? ? 5.031 1.676 -0.057 O9 A1AGK 86 A1AGK H4 H4 H 0 1 N N N N N N ? ? ? 7.192 2.570 1.072 H4 A1AGK 87 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1AGK O3 C12 DOUB N N 1 A1AGK C13 C12 SING N N 2 A1AGK C13 C14 SING N N 3 A1AGK C12 N1 SING N N 4 A1AGK O4 C24 DOUB N N 5 A1AGK N1 C4 SING N N 6 A1AGK N1 C3 SING N N 7 A1AGK C4 C5 SING N N 8 A1AGK C24 N4 SING N N 9 A1AGK C24 C23 SING N N 10 A1AGK C14 C3 SING N N 11 A1AGK N4 C25 SING N N 12 A1AGK C2 C3 SING N N 13 A1AGK C2 O2 SING N N 14 A1AGK O1 C1 DOUB N N 15 A1AGK C7 C8 SING N N 16 A1AGK C7 C6 SING N N 17 A1AGK C8 C9 SING N N 18 A1AGK O2 C1 SING N N 19 A1AGK C23 C22 SING N N 20 A1AGK C23 C26 SING N N 21 A1AGK C1 N2 SING N N 22 A1AGK C25 C26 SING N N 23 A1AGK C5 C6 SING N N 24 A1AGK C18 C17 SING N N 25 A1AGK C22 C21 SING N N 26 A1AGK C6 C11 SING N N 27 A1AGK N2 C15 SING N N 28 A1AGK C15 C20 SING N N 29 A1AGK C15 C16 SING N N 30 A1AGK N3 C21 SING N N 31 A1AGK N3 C20 SING N N 32 A1AGK C9 C10 SING N N 33 A1AGK C17 C16 SING N N 34 A1AGK C17 C19 SING N N 35 A1AGK C21 C27 SING N N 36 A1AGK C20 O6 DOUB N N 37 A1AGK C11 C10 SING N N 38 A1AGK C27 O5 SING N N 39 A1AGK C18 H1 SING N N 40 A1AGK C18 H2 SING N N 41 A1AGK C18 H3 SING N N 42 A1AGK C27 S1 SING N N 43 A1AGK C27 H5 SING N N 44 A1AGK C26 H6 SING N N 45 A1AGK C26 H7 SING N N 46 A1AGK C23 H8 SING N N 47 A1AGK C11 H9 SING N N 48 A1AGK C11 H10 SING N N 49 A1AGK C10 H11 SING N N 50 A1AGK C10 H12 SING N N 51 A1AGK C13 H13 SING N N 52 A1AGK C13 H14 SING N N 53 A1AGK C14 H15 SING N N 54 A1AGK C14 H16 SING N N 55 A1AGK C7 H17 SING N N 56 A1AGK C7 H18 SING N N 57 A1AGK C2 H19 SING N N 58 A1AGK C2 H20 SING N N 59 A1AGK C21 H21 SING N N 60 A1AGK C3 H22 SING N N 61 A1AGK C4 H23 SING N N 62 A1AGK C4 H24 SING N N 63 A1AGK C5 H25 SING N N 64 A1AGK C5 H26 SING N N 65 A1AGK C6 H27 SING N N 66 A1AGK C9 H28 SING N N 67 A1AGK C9 H29 SING N N 68 A1AGK C8 H30 SING N N 69 A1AGK C8 H31 SING N N 70 A1AGK C15 H32 SING N N 71 A1AGK C17 H33 SING N N 72 A1AGK C19 H34 SING N N 73 A1AGK C19 H35 SING N N 74 A1AGK C19 H36 SING N N 75 A1AGK C22 H37 SING N N 76 A1AGK C22 H38 SING N N 77 A1AGK C16 H39 SING N N 78 A1AGK C16 H40 SING N N 79 A1AGK C25 H41 SING N N 80 A1AGK C25 H42 SING N N 81 A1AGK N2 H43 SING N N 82 A1AGK N3 H44 SING N N 83 A1AGK N4 H45 SING N N 84 A1AGK O5 H46 SING N N 85 A1AGK S1 O8 SING N N 86 A1AGK S1 O7 DOUB N N 87 A1AGK S1 O9 DOUB N N 88 A1AGK O8 H4 SING N N 89 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1AGK SMILES ACDLabs 12.01 "O=C1NCCC1CC(NC(=O)C(CC(C)C)NC(=O)OCC1CCC(=O)N1CCC1CCCCC1)C(O)S(=O)(=O)O" A1AGK InChI InChI 1.06 "InChI=1S/C27H46N4O9S/c1-17(2)14-21(25(34)29-22(26(35)41(37,38)39)15-19-10-12-28-24(19)33)30-27(36)40-16-20-8-9-23(32)31(20)13-11-18-6-4-3-5-7-18/h17-22,26,35H,3-16H2,1-2H3,(H,28,33)(H,29,34)(H,30,36)(H,37,38,39)/t19-,20-,21-,22-,26+/m0/s1" A1AGK InChIKey InChI 1.06 UKTOBRQSOYSYJK-LEUUJVKFSA-N A1AGK SMILES_CANONICAL CACTVS 3.385 "CC(C)C[C@H](NC(=O)OC[C@@H]1CCC(=O)N1CCC2CCCCC2)C(=O)N[C@@H](C[C@@H]3CCNC3=O)[C@H](O)[S](O)(=O)=O" A1AGK SMILES CACTVS 3.385 "CC(C)C[CH](NC(=O)OC[CH]1CCC(=O)N1CCC2CCCCC2)C(=O)N[CH](C[CH]3CCNC3=O)[CH](O)[S](O)(=O)=O" A1AGK SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)C[C@@H](C(=O)N[C@@H](C[C@@H]1CCNC1=O)C(O)S(=O)(=O)O)NC(=O)OC[C@@H]2CCC(=O)N2CCC3CCCCC3" A1AGK SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)CC(C(=O)NC(CC1CCNC1=O)C(O)S(=O)(=O)O)NC(=O)OCC2CCC(=O)N2CCC3CCCCC3" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1AGK "SYSTEMATIC NAME" ACDLabs 12.01 "(1R,2S)-2-{[N-({[(2S)-1-(2-cyclohexylethyl)-5-oxopyrrolidin-2-yl]methoxy}carbonyl)-L-leucyl]amino}-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid" A1AGK "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{S})-2-[[(2~{S})-2-[[(2~{S})-1-(2-cyclohexylethyl)-5-oxidanylidene-pyrrolidin-2-yl]methoxycarbonylamino]-4-methyl-pentanoyl]amino]-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propane-1-sulfonic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1AGK "Create component" 2024-02-29 RCSB A1AGK "Initial release" 2024-07-10 RCSB #