data_A1AHC # _chem_comp.id A1AHC _chem_comp.name "4-nitrophenyl 2-amino-2-deoxy-alpha-D-galactopyranoside" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H16 N2 O7" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-03-06 _chem_comp.pdbx_modified_date 2024-12-13 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 300.265 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1AHC _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9AWT _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1AHC C4 C1 C 0 1 N N R N N N 63.250 -4.135 31.931 3.346 -0.701 -0.589 C4 A1AHC 1 A1AHC C5 C2 C 0 1 N N R N N N 63.838 -5.512 31.589 1.927 -1.250 -0.420 C5 A1AHC 2 A1AHC C6 C3 C 0 1 N N N N N N 64.937 -5.907 32.571 1.974 -2.778 -0.368 C6 A1AHC 3 A1AHC N2 N1 N 0 1 N N N N N N 59.759 -4.691 30.435 2.528 2.766 0.710 N2 A1AHC 4 A1AHC C2 C4 C 0 1 N N R N N N 60.962 -4.906 31.290 2.646 1.302 0.723 C2 A1AHC 5 A1AHC C3 C5 C 0 1 N N R N N N 62.010 -3.802 31.067 3.299 0.830 -0.580 C3 A1AHC 6 A1AHC O3 O1 O 0 1 N N N N N N 61.395 -2.510 31.388 4.627 1.350 -0.665 O3 A1AHC 7 A1AHC O4 O2 O 0 1 N N N N N N 62.934 -4.088 33.358 4.167 -1.160 0.486 O4 A1AHC 8 A1AHC O6 O3 O 0 1 N N N N N N 65.452 -7.208 32.289 0.642 -3.294 -0.326 O6 A1AHC 9 A1AHC O5 O4 O 0 1 N N N N N N 62.824 -6.517 31.750 1.366 -0.749 0.796 O5 A1AHC 10 A1AHC C1 C6 C 0 1 N N R N N N 61.594 -6.302 30.998 1.252 0.675 0.843 C1 A1AHC 11 A1AHC O1 O5 O 0 1 N N N N N N 61.777 -6.504 29.576 0.433 1.122 -0.240 O1 A1AHC 12 A1AHC "C1'" C7 C 0 1 Y N N N N N 62.089 -7.722 29.058 -0.892 0.829 -0.172 "C1'" A1AHC 13 A1AHC "C2'" C8 C 0 1 Y N N N N N 63.368 -8.029 28.559 -1.745 1.234 -1.189 "C2'" A1AHC 14 A1AHC "C3'" C9 C 0 1 Y N N N N N 63.617 -9.293 28.019 -3.092 0.934 -1.119 "C3'" A1AHC 15 A1AHC "C6'" C10 C 0 1 Y N N N N N 61.086 -8.661 29.006 -1.393 0.121 0.910 "C6'" A1AHC 16 A1AHC "C5'" C11 C 0 1 Y N N N N N 61.316 -9.912 28.467 -2.741 -0.176 0.975 "C5'" A1AHC 17 A1AHC "C4'" C12 C 0 1 Y N N N N N 62.572 -10.213 27.981 -3.590 0.233 -0.036 "C4'" A1AHC 18 A1AHC "N1'" N2 N 1 1 N N N N N N 62.764 -11.460 27.453 -5.033 -0.086 0.037 "N1'" A1AHC 19 A1AHC "O2'" O6 O 0 1 N N N N N N 61.665 -12.265 27.354 -5.781 0.270 -0.856 "O2'" A1AHC 20 A1AHC "O1'" O7 O -1 1 N N N N N N 64.017 -11.871 27.036 -5.473 -0.704 0.990 "O1'" A1AHC 21 A1AHC H1 H1 H 0 1 N N N N N N 64.019 -3.379 31.715 3.759 -1.047 -1.537 H1 A1AHC 22 A1AHC H2 H2 H 0 1 N N N N N N 64.235 -5.505 30.563 1.311 -0.932 -1.262 H2 A1AHC 23 A1AHC H3 H3 H 0 1 N N N N N N 65.756 -5.176 32.502 2.481 -3.156 -1.256 H3 A1AHC 24 A1AHC H4 H4 H 0 1 N N N N N N 64.524 -5.900 33.590 2.515 -3.095 0.523 H4 A1AHC 25 A1AHC H5 H5 H 0 1 N N N N N N 59.365 -3.793 30.633 2.098 3.102 1.559 H5 A1AHC 26 A1AHC H6 H6 H 0 1 N N N N N N 60.023 -4.734 29.471 3.427 3.201 0.564 H6 A1AHC 27 A1AHC H8 H8 H 0 1 N N N N N N 60.657 -4.884 32.347 3.259 0.994 1.570 H8 A1AHC 28 A1AHC H9 H9 H 0 1 N N N N N N 62.310 -3.813 30.009 2.713 1.182 -1.429 H9 A1AHC 29 A1AHC H10 H10 H 0 1 N N N N N N 62.029 -1.815 31.256 5.101 1.090 -1.467 H10 A1AHC 30 A1AHC H11 H11 H 0 1 N N N N N N 63.712 -4.296 33.862 4.240 -2.122 0.542 H11 A1AHC 31 A1AHC H12 H12 H 0 1 N N N N N N 66.132 -7.423 32.917 0.595 -4.259 -0.292 H12 A1AHC 32 A1AHC H13 H13 H 0 1 N N N N N N 60.863 -7.047 31.345 0.800 0.973 1.789 H13 A1AHC 33 A1AHC H14 H14 H 0 1 N N N N N N 64.155 -7.290 28.593 -1.357 1.782 -2.034 H14 A1AHC 34 A1AHC H15 H15 H 0 1 N N N N N N 64.595 -9.550 27.640 -3.757 1.248 -1.910 H15 A1AHC 35 A1AHC H16 H16 H 0 1 N N N N N N 60.107 -8.418 29.391 -0.730 -0.199 1.700 H16 A1AHC 36 A1AHC H17 H17 H 0 1 N N N N N N 60.523 -10.645 28.427 -3.131 -0.728 1.818 H17 A1AHC 37 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1AHC "O1'" "N1'" SING N N 1 A1AHC "O2'" "N1'" DOUB N N 2 A1AHC "N1'" "C4'" SING N N 3 A1AHC "C4'" "C3'" DOUB Y N 4 A1AHC "C4'" "C5'" SING Y N 5 A1AHC "C3'" "C2'" SING Y N 6 A1AHC "C5'" "C6'" DOUB Y N 7 A1AHC "C2'" "C1'" DOUB Y N 8 A1AHC "C6'" "C1'" SING Y N 9 A1AHC "C1'" O1 SING N N 10 A1AHC O1 C1 SING N N 11 A1AHC N2 C2 SING N N 12 A1AHC C1 C2 SING N N 13 A1AHC C1 O5 SING N N 14 A1AHC C3 C2 SING N N 15 A1AHC C3 O3 SING N N 16 A1AHC C3 C4 SING N N 17 A1AHC C5 O5 SING N N 18 A1AHC C5 C4 SING N N 19 A1AHC C5 C6 SING N N 20 A1AHC C4 O4 SING N N 21 A1AHC O6 C6 SING N N 22 A1AHC C4 H1 SING N N 23 A1AHC C5 H2 SING N N 24 A1AHC C6 H3 SING N N 25 A1AHC C6 H4 SING N N 26 A1AHC N2 H5 SING N N 27 A1AHC N2 H6 SING N N 28 A1AHC C2 H8 SING N N 29 A1AHC C3 H9 SING N N 30 A1AHC O3 H10 SING N N 31 A1AHC O4 H11 SING N N 32 A1AHC O6 H12 SING N N 33 A1AHC C1 H13 SING N N 34 A1AHC "C2'" H14 SING N N 35 A1AHC "C3'" H15 SING N N 36 A1AHC "C6'" H16 SING N N 37 A1AHC "C5'" H17 SING N N 38 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1AHC SMILES ACDLabs 12.01 "[O-][N+](=O)c1ccc(cc1)OC1OC(CO)C(O)C(O)C1N" A1AHC InChI InChI 1.06 "InChI=1S/C12H16N2O7/c13-9-11(17)10(16)8(5-15)21-12(9)20-7-3-1-6(2-4-7)14(18)19/h1-4,8-12,15-17H,5,13H2/t8-,9-,10+,11-,12+/m1/s1" A1AHC InChIKey InChI 1.06 ZRNBGANFPXCMFT-ZIQFBCGOSA-N A1AHC SMILES_CANONICAL CACTVS 3.385 "N[C@@H]1[C@@H](O)[C@@H](O)[C@@H](CO)O[C@@H]1Oc2ccc(cc2)[N+]([O-])=O" A1AHC SMILES CACTVS 3.385 "N[CH]1[CH](O)[CH](O)[CH](CO)O[CH]1Oc2ccc(cc2)[N+]([O-])=O" A1AHC SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1[N+](=O)[O-])O[C@@H]2[C@@H]([C@H]([C@H]([C@H](O2)CO)O)O)N" A1AHC SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1[N+](=O)[O-])OC2C(C(C(C(O2)CO)O)O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1AHC "SYSTEMATIC NAME" ACDLabs 12.01 "4-nitrophenyl 2-amino-2-deoxy-alpha-D-galactopyranoside" A1AHC "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{R},3~{R},4~{R},5~{R},6~{R})-5-azanyl-2-(hydroxymethyl)-6-(4-nitrophenoxy)oxane-3,4-diol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1AHC "Create component" 2024-03-06 RCSB A1AHC "Initial release" 2024-12-18 RCSB #