data_A1AJD
# 
_chem_comp.id                                    A1AJD 
_chem_comp.name                                  "(4Z)-oct-4-en-1-ol" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C8 H16 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2024-04-03 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        128.212 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A1AJD 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8VJP 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A1AJD CEK C1  C 0 1 N N N N N N -12.756 3.663  -19.211 2.935  0.786  -0.247 CEK A1AJD 1  
A1AJD CEL C2  C 0 1 N N N N N N -14.059 2.766  -19.182 2.080  -0.440 0.080  CEL A1AJD 2  
A1AJD CEM C3  C 0 1 N N N N N N -13.805 1.244  -18.907 0.692  -0.274 -0.542 CEM A1AJD 3  
A1AJD CEN C4  C 0 1 N N N N N N -14.970 0.515  -18.912 -0.150 -1.482 -0.219 CEN A1AJD 4  
A1AJD CEO C5  C 0 1 N N N N N N -15.067 -0.626 -18.108 -1.334 -1.329 0.321  CEO A1AJD 5  
A1AJD CEP C6  C 0 1 N N N N N N -14.186 -1.285 -17.200 -1.925 0.049  0.464  CEP A1AJD 6  
A1AJD CEQ C7  C 0 1 N N N N N N -14.037 -0.660 -15.788 -3.314 0.077  -0.176 CEQ A1AJD 7  
A1AJD CER C8  C 0 1 N N N N N N -13.069 -1.482 -14.893 -3.915 1.477  -0.031 CER A1AJD 8  
A1AJD O1  O1  O 0 1 N Y N N N N -11.977 3.724  -17.840 4.232  0.631  0.333  O1  A1AJD 9  
A1AJD H1  H1  H 0 1 N N N N N N -12.076 3.258  -19.975 3.031  0.884  -1.329 H1  A1AJD 10 
A1AJD H2  H2  H 0 1 N N N N N N -13.049 4.687  -19.486 2.460  1.679  0.158  H2  A1AJD 11 
A1AJD H3  H3  H 0 1 N N N N N N -14.721 3.150  -18.392 2.556  -1.333 -0.326 H3  A1AJD 12 
A1AJD H4  H4  H 0 1 N N N N N N -14.559 2.858  -20.157 1.985  -0.538 1.161  H4  A1AJD 13 
A1AJD H5  H5  H 0 1 N N N N N N -13.137 0.850  -19.687 0.217  0.619  -0.136 H5  A1AJD 14 
A1AJD H6  H6  H 0 1 N N N N N N -13.324 1.137  -17.923 0.788  -0.176 -1.623 H6  A1AJD 15 
A1AJD H7  H7  H 0 1 N N N N N N -15.802 0.820  -19.530 0.222  -2.473 -0.433 H7  A1AJD 16 
A1AJD H8  H8  H 0 1 N N N N N N -16.024 -1.119 -18.194 -1.886 -2.192 0.664  H8  A1AJD 17 
A1AJD H9  H9  H 0 1 N N N N N N -14.551 -2.315 -17.071 -2.007 0.302  1.521  H9  A1AJD 18 
A1AJD H10 H10 H 0 1 N N N N N N -13.188 -1.305 -17.661 -1.281 0.774  -0.034 H10 A1AJD 19 
A1AJD H11 H11 H 0 1 N N N N N N -13.645 0.363  -15.891 -3.233 -0.175 -1.233 H11 A1AJD 20 
A1AJD H12 H12 H 0 1 N N N N N N -15.026 -0.627 -15.307 -3.958 -0.648 0.322  H12 A1AJD 21 
A1AJD H13 H13 H 0 1 N N N N N N -12.991 -1.007 -13.904 -3.996 1.730  1.026  H13 A1AJD 22 
A1AJD H14 H14 H 0 1 N N N N N N -13.455 -2.506 -14.779 -3.271 2.202  -0.529 H14 A1AJD 23 
A1AJD H15 H15 H 0 1 N N N N N N -12.075 -1.516 -15.363 -4.905 1.497  -0.487 H15 A1AJD 24 
A1AJD H16 H16 H 0 1 N N N N N N -11.211 4.278  -17.935 4.829  1.373  0.166  H16 A1AJD 25 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A1AJD CEK CEL SING N N 1  
A1AJD CEL CEM SING N N 2  
A1AJD CEN CEM SING N N 3  
A1AJD CEN CEO DOUB N Z 4  
A1AJD CEO CEP SING N N 5  
A1AJD CEP CEQ SING N N 6  
A1AJD CEQ CER SING N N 7  
A1AJD CEK O1  SING N N 8  
A1AJD CEK H1  SING N N 9  
A1AJD CEK H2  SING N N 10 
A1AJD CEL H3  SING N N 11 
A1AJD CEL H4  SING N N 12 
A1AJD CEM H5  SING N N 13 
A1AJD CEM H6  SING N N 14 
A1AJD CEN H7  SING N N 15 
A1AJD CEO H8  SING N N 16 
A1AJD CEP H9  SING N N 17 
A1AJD CEP H10 SING N N 18 
A1AJD CEQ H11 SING N N 19 
A1AJD CEQ H12 SING N N 20 
A1AJD CER H13 SING N N 21 
A1AJD CER H14 SING N N 22 
A1AJD CER H15 SING N N 23 
A1AJD O1  H16 SING N N 24 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A1AJD SMILES           ACDLabs              12.01 CCC\C=C/CCCO                                                   
A1AJD InChI            InChI                1.06  InChI=1S/C8H16O/c1-2-3-4-5-6-7-8-9/h4-5,9H,2-3,6-8H2,1H3/b5-4- 
A1AJD InChIKey         InChI                1.06  OZQBPZSICOOLGU-PLNGDYQASA-N                                    
A1AJD SMILES_CANONICAL CACTVS               3.385 CCC\C=C/CCCO                                                   
A1AJD SMILES           CACTVS               3.385 CCCC=CCCCO                                                     
A1AJD SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 CCC/C=C\CCCO                                                   
A1AJD SMILES           "OpenEye OEToolkits" 2.0.7 CCCC=CCCCO                                                     
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
A1AJD "SYSTEMATIC NAME" ACDLabs              12.01 "(4Z)-oct-4-en-1-ol"   
A1AJD "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(~{Z})-oct-4-en-1-ol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A1AJD "Create component" 2024-04-03 RCSB 
A1AJD "Initial release"  2024-05-15 RCSB 
A1AJD "Modify PCM"       2024-09-27 PDBE 
# 
loop_
_pdbx_chem_comp_pcm.pcm_id 
_pdbx_chem_comp_pcm.comp_id 
_pdbx_chem_comp_pcm.modified_residue_id 
_pdbx_chem_comp_pcm.type 
_pdbx_chem_comp_pcm.category 
_pdbx_chem_comp_pcm.position 
_pdbx_chem_comp_pcm.polypeptide_position 
_pdbx_chem_comp_pcm.comp_id_linking_atom 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession 
1 A1AJD ALA None Crosslinker "Amino-acid backbone" "Any position" CEK CA ? ? 
2 A1AJD ALA None Crosslinker "Amino-acid backbone" "Any position" CER CA ? ? 
#