data_A1AJL # _chem_comp.id A1AJL _chem_comp.name "(3R)-3-methoxy-1-(7H-pyrrolo[2,3-d]pyrimidine-4-carbonyl)pyrrolidine-3-carboxylic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C13 H14 N4 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-04-03 _chem_comp.pdbx_modified_date 2024-05-10 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 290.275 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1AJL _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7GZ6 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1AJL N1 N1 N 0 1 Y N N N N N -3.889 15.431 -3.854 1.686 -1.437 -0.254 N1 A1AJL 1 A1AJL N3 N2 N 0 1 Y N N N N N -5.344 15.407 -0.077 5.334 0.273 0.214 N3 A1AJL 2 A1AJL C4 C1 C 0 1 N N N N N N -1.808 13.427 -4.405 -0.910 -1.184 -0.465 C4 A1AJL 3 A1AJL C5 C2 C 0 1 N N N N N N -1.587 15.510 -3.050 0.632 0.771 -0.166 C5 A1AJL 4 A1AJL C6 C3 C 0 1 Y N N N N N -3.071 15.473 -2.783 1.817 -0.117 -0.133 C6 A1AJL 5 A1AJL C7 C4 C 0 1 Y N N N N N -5.201 15.364 -3.612 2.737 -2.230 -0.224 C7 A1AJL 6 A1AJL C8 C5 C 0 1 Y N N N N N -4.991 15.386 -1.395 4.205 -0.484 0.051 C8 A1AJL 7 A1AJL C10 C6 C 0 1 Y N N N N N -3.107 15.528 -0.142 3.670 1.746 0.185 C10 A1AJL 8 A1AJL O3 O1 O 0 1 N N N N N N -0.912 16.381 -2.508 0.770 1.974 -0.055 O3 A1AJL 9 A1AJL N N3 N 0 1 N N N N N N -1.036 14.538 -3.812 -0.600 0.246 -0.320 N A1AJL 10 A1AJL C3 C7 C 0 1 N N N N N N -0.741 12.500 -4.974 -2.443 -1.310 -0.586 C3 A1AJL 11 A1AJL C12 C8 C 0 1 N N N N N N 0.393 14.356 -4.069 -1.860 1.010 -0.370 C12 A1AJL 12 A1AJL C1 C9 C 0 1 N N R N N N 0.495 12.825 -4.152 -2.952 0.003 0.065 C1 A1AJL 13 A1AJL C2 C10 C 0 1 N N N N N N 0.540 12.147 -2.786 -4.299 0.393 -0.488 C2 A1AJL 14 A1AJL O2 O2 O 0 1 N N N N N N 0.927 12.841 -1.758 -5.121 1.171 0.234 O2 A1AJL 15 A1AJL O1 O3 O 0 1 N N N N N N 0.282 10.964 -2.723 -4.638 0.007 -1.581 O1 A1AJL 16 A1AJL O O4 O 0 1 N N N N N N 1.667 12.426 -4.863 -3.001 -0.117 1.489 O A1AJL 17 A1AJL C C11 C 0 1 N N N N N N 2.918 12.756 -4.253 -3.914 -1.112 1.957 C A1AJL 18 A1AJL C11 C12 C 0 1 Y N N N N N -3.593 15.465 -1.478 3.108 0.410 0.026 C11 A1AJL 19 A1AJL C9 C13 C 0 1 Y N N N N N -4.194 15.492 0.670 5.003 1.599 0.292 C9 A1AJL 20 A1AJL N2 N4 N 0 1 Y N N N N N -5.830 15.323 -2.439 3.967 -1.782 -0.077 N2 A1AJL 21 A1AJL H H1 H 0 1 N N N N N N -6.276 15.367 0.282 6.237 -0.079 0.266 H A1AJL 22 A1AJL H7 H2 H 0 1 N N N N N N -2.472 13.794 -5.201 -0.433 -1.576 -1.364 H7 A1AJL 23 A1AJL H8 H3 H 0 1 N N N N N N -2.405 12.912 -3.638 -0.558 -1.730 0.410 H8 A1AJL 24 A1AJL H9 H4 H 0 1 N N N N N N -5.837 15.340 -4.485 2.584 -3.294 -0.326 H9 A1AJL 25 A1AJL H11 H5 H 0 1 N N N N N N -2.074 15.592 0.166 3.121 2.676 0.212 H11 A1AJL 26 A1AJL H5 H6 H 0 1 N N N N N N -0.569 12.708 -6.040 -2.744 -1.363 -1.633 H5 A1AJL 27 A1AJL H6 H7 H 0 1 N N N N N N -1.030 11.446 -4.848 -2.802 -2.181 -0.038 H6 A1AJL 28 A1AJL H12 H8 H 0 1 N N N N N N 0.695 14.831 -5.014 -1.821 1.851 0.323 H12 A1AJL 29 A1AJL H13 H9 H 0 1 N N N N N N 1.004 14.756 -3.246 -2.049 1.364 -1.383 H13 A1AJL 30 A1AJL H4 H10 H 0 1 N N N N N N 0.967 12.279 -0.993 -5.974 1.395 -0.162 H4 A1AJL 31 A1AJL H2 H11 H 0 1 N N N N N N 3.742 12.400 -4.889 -4.900 -0.929 1.532 H2 A1AJL 32 A1AJL H1 H12 H 0 1 N N N N N N 2.991 13.847 -4.134 -3.564 -2.099 1.653 H1 A1AJL 33 A1AJL H3 H13 H 0 1 N N N N N N 2.983 12.275 -3.266 -3.973 -1.068 3.045 H3 A1AJL 34 A1AJL H10 H14 H 0 1 N N N N N N -4.160 15.525 1.749 5.707 2.407 0.421 H10 A1AJL 35 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1AJL C O SING N N 1 A1AJL O C1 SING N N 2 A1AJL C2 C1 SING N N 3 A1AJL O1 C2 DOUB N N 4 A1AJL O2 C2 SING N N 5 A1AJL C1 C3 SING N N 6 A1AJL C3 C4 SING N N 7 A1AJL C4 N SING N N 8 A1AJL N C5 SING N N 9 A1AJL C5 O3 DOUB N N 10 A1AJL C6 C5 SING N N 11 A1AJL C6 N1 DOUB Y N 12 A1AJL N1 C7 SING Y N 13 A1AJL C7 N2 DOUB Y N 14 A1AJL N2 C8 SING Y N 15 A1AJL C8 N3 SING Y N 16 A1AJL N3 C9 SING Y N 17 A1AJL C9 C10 DOUB Y N 18 A1AJL C10 C11 SING Y N 19 A1AJL C11 C6 SING Y N 20 A1AJL C8 C11 DOUB Y N 21 A1AJL C12 N SING N N 22 A1AJL C1 C12 SING N N 23 A1AJL N3 H SING N N 24 A1AJL C4 H7 SING N N 25 A1AJL C4 H8 SING N N 26 A1AJL C7 H9 SING N N 27 A1AJL C10 H11 SING N N 28 A1AJL C3 H5 SING N N 29 A1AJL C3 H6 SING N N 30 A1AJL C12 H12 SING N N 31 A1AJL C12 H13 SING N N 32 A1AJL O2 H4 SING N N 33 A1AJL C H2 SING N N 34 A1AJL C H1 SING N N 35 A1AJL C H3 SING N N 36 A1AJL C9 H10 SING N N 37 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1AJL SMILES ACDLabs 12.01 "COC1(CCN(C1)C(=O)c1ncnc2[NH]ccc21)C(=O)O" A1AJL InChI InChI 1.06 "InChI=1S/C13H14N4O4/c1-21-13(12(19)20)3-5-17(6-13)11(18)9-8-2-4-14-10(8)16-7-15-9/h2,4,7H,3,5-6H2,1H3,(H,19,20)(H,14,15,16)/t13-/m1/s1" A1AJL InChIKey InChI 1.06 YEFYXGDSKBIWST-CYBMUJFWSA-N A1AJL SMILES_CANONICAL CACTVS 3.385 "CO[C@@]1(CCN(C1)C(=O)c2ncnc3[nH]ccc23)C(O)=O" A1AJL SMILES CACTVS 3.385 "CO[C]1(CCN(C1)C(=O)c2ncnc3[nH]ccc23)C(O)=O" A1AJL SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CO[C@@]1(CCN(C1)C(=O)c2c3cc[nH]c3ncn2)C(=O)O" A1AJL SMILES "OpenEye OEToolkits" 2.0.7 "COC1(CCN(C1)C(=O)c2c3cc[nH]c3ncn2)C(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1AJL "SYSTEMATIC NAME" ACDLabs 12.01 "(3R)-3-methoxy-1-(7H-pyrrolo[2,3-d]pyrimidine-4-carbonyl)pyrrolidine-3-carboxylic acid" A1AJL "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(3~{R})-3-methoxy-1-(7~{H}-pyrrolo[2,3-d]pyrimidin-4-ylcarbonyl)pyrrolidine-3-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1AJL "Create component" 2024-04-03 RCSB A1AJL "Initial release" 2024-05-15 RCSB #