data_A1AK5 # _chem_comp.id A1AK5 _chem_comp.name "7-[(1S)-2-methyl-1-{[(6M)-6-{5-[(methylamino)methyl]furan-3-yl}-7H-pyrrolo[2,3-d]pyrimidin-4-yl]amino}propyl]-3,4-dihydro-1lambda~6~-benzothiopyran-1,1(2H)-dione" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H29 N5 O3 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-04-05 _chem_comp.pdbx_modified_date 2024-05-10 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 479.594 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1AK5 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7GZX _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1AK5 N1 N1 N 0 1 N N N N N N 3.199 -16.260 17.913 -0.482 -1.102 0.390 N1 A1AK5 1 A1AK5 N3 N2 N 0 1 Y N N N N N 5.937 -15.090 15.018 2.372 -3.468 -1.365 N3 A1AK5 2 A1AK5 C4 C1 C 0 1 Y N N N N N 8.762 -17.707 18.012 4.968 0.437 0.239 C4 A1AK5 3 A1AK5 C5 C2 C 0 1 Y N N N N N 7.568 -16.990 17.536 3.866 -0.503 -0.063 C5 A1AK5 4 A1AK5 C6 C3 C 0 1 Y N N N N N 6.296 -16.962 18.060 2.564 -0.315 0.267 C6 A1AK5 5 A1AK5 C7 C4 C 0 1 Y N N N N N 5.490 -16.194 17.154 1.834 -1.481 -0.220 C7 A1AK5 6 A1AK5 C8 C5 C 0 1 Y N N N N N 4.136 -15.803 17.040 0.491 -1.890 -0.199 C8 A1AK5 7 A1AK5 C10 C6 C 0 1 Y N N N N N 1.848 -14.551 19.080 -2.786 -0.350 0.514 C10 A1AK5 8 A1AK5 C13 C7 C 0 1 Y N N N N N 1.859 -12.381 20.913 -4.487 1.843 0.732 C13 A1AK5 9 A1AK5 C15 C8 C 0 1 Y N N N N N 2.305 -14.727 20.386 -3.959 -0.296 -0.209 C15 A1AK5 10 A1AK5 C17 C9 C 0 1 N N N N N N 2.824 -11.241 22.973 -6.269 3.366 -0.218 C17 A1AK5 11 A1AK5 C20 C10 C 0 1 N N N N N N 0.879 -17.938 17.366 -1.184 -3.691 1.481 C20 A1AK5 12 A1AK5 C21 C11 C 0 1 N N N N N N -0.523 -16.294 18.673 -1.800 -1.724 2.892 C21 A1AK5 13 A1AK5 C22 C12 C 0 1 Y N N N N N 4.658 -14.723 15.078 1.103 -3.811 -1.321 C22 A1AK5 14 A1AK5 C24 C13 C 0 1 Y N N N N N 9.951 -17.864 17.388 4.876 1.630 0.886 C24 A1AK5 15 A1AK5 O1 O1 O 0 1 N N N N N N 4.537 -13.950 22.577 -6.894 -0.432 -0.811 O1 A1AK5 16 A1AK5 S S1 S 0 1 N N N N N N 3.112 -13.921 22.806 -6.267 0.811 -1.095 S A1AK5 17 A1AK5 O O2 O 0 1 N N N N N N 2.502 -15.082 23.406 -5.806 1.118 -2.404 O A1AK5 18 A1AK5 C16 C14 C 0 1 N N N N N N 2.683 -12.524 23.783 -7.236 2.189 -0.414 C16 A1AK5 19 A1AK5 C18 C15 C 0 1 N N N N N N 1.786 -11.205 21.865 -5.341 3.058 0.944 C18 A1AK5 20 A1AK5 C12 C16 C 0 1 Y N N N N N 1.405 -12.232 19.613 -3.296 1.786 1.455 C12 A1AK5 21 A1AK5 C11 C17 C 0 1 Y N N N N N 1.410 -13.282 18.707 -2.453 0.701 1.348 C11 A1AK5 22 A1AK5 C14 C18 C 0 1 Y N N N N N 2.350 -13.648 21.264 -4.804 0.800 -0.106 C14 A1AK5 23 A1AK5 C9 C19 C 0 1 N N S N N N 1.862 -15.693 18.075 -1.878 -1.547 0.401 C9 A1AK5 24 A1AK5 C19 C20 C 0 1 N N N N N N 0.880 -16.822 18.436 -2.107 -2.476 1.596 C19 A1AK5 25 A1AK5 N2 N3 N 0 1 Y N N N N N 3.734 -15.050 15.989 0.178 -3.055 -0.758 N2 A1AK5 26 A1AK5 C23 C21 C 0 1 Y N N N N N 6.321 -15.796 16.100 2.786 -2.320 -0.831 C23 A1AK5 27 A1AK5 N4 N4 N 0 1 Y N N N N N 7.581 -16.288 16.338 4.004 -1.705 -0.722 N4 A1AK5 28 A1AK5 C3 C22 C 0 1 Y N N N N N 8.886 -18.437 19.228 6.389 0.273 -0.092 C3 A1AK5 29 A1AK5 O2 O3 O 0 1 Y N N N N N 10.794 -18.659 18.129 6.101 2.171 0.955 O2 A1AK5 30 A1AK5 C2 C23 C 0 1 Y N N N N N 10.106 -19.003 19.243 7.008 1.370 0.376 C2 A1AK5 31 A1AK5 C1 C24 C 0 1 N N N N N N 10.783 -19.954 20.183 8.484 1.653 0.270 C1 A1AK5 32 A1AK5 N N5 N 0 1 N N N N N N 11.158 -21.204 19.517 8.756 2.379 -0.978 N A1AK5 33 A1AK5 C C25 C 0 1 N N N N N N 9.995 -22.045 19.216 10.188 2.673 -1.115 C A1AK5 34 A1AK5 H10 H1 H 0 1 N N N N N N 3.055 -17.220 17.672 -0.239 -0.256 0.798 H10 A1AK5 35 A1AK5 H9 H2 H 0 1 N N N N N N 5.967 -17.428 18.977 2.147 0.534 0.789 H9 A1AK5 36 A1AK5 H13 H3 H 0 1 N N N N N N 2.625 -15.704 20.717 -4.223 -1.115 -0.862 H13 A1AK5 37 A1AK5 H16 H4 H 0 1 N N N N N N 2.679 -10.375 23.635 -5.681 3.510 -1.125 H16 A1AK5 38 A1AK5 H17 H5 H 0 1 N N N N N N 3.830 -11.199 22.530 -6.835 4.272 -0.003 H17 A1AK5 39 A1AK5 H22 H6 H 0 1 N N N N N N 0.168 -18.725 17.657 -1.348 -4.353 2.332 H22 A1AK5 40 A1AK5 H21 H7 H 0 1 N N N N N N 0.581 -17.515 16.395 -1.403 -4.227 0.557 H21 A1AK5 41 A1AK5 H23 H8 H 0 1 N N N N N N 1.888 -18.368 17.284 -0.146 -3.360 1.472 H23 A1AK5 42 A1AK5 H25 H9 H 0 1 N N N N N N -1.192 -17.130 18.928 -0.762 -1.392 2.884 H25 A1AK5 43 A1AK5 H26 H10 H 0 1 N N N N N N -0.507 -15.571 19.502 -2.457 -0.858 2.974 H26 A1AK5 44 A1AK5 H24 H11 H 0 1 N N N N N N -0.887 -15.798 17.761 -1.963 -2.385 3.743 H24 A1AK5 45 A1AK5 H27 H12 H 0 1 N N N N N N 4.321 -14.073 14.284 0.805 -4.750 -1.764 H27 A1AK5 46 A1AK5 H28 H13 H 0 1 N N N N N N 10.205 -17.424 16.435 3.969 2.068 1.277 H28 A1AK5 47 A1AK5 H15 H14 H 0 1 N N N N N N 1.641 -12.625 24.122 -7.669 1.901 0.544 H15 A1AK5 48 A1AK5 H14 H15 H 0 1 N N N N N N 3.349 -12.475 24.657 -8.026 2.469 -1.111 H14 A1AK5 49 A1AK5 H18 H16 H 0 1 N N N N N N 0.788 -11.195 22.327 -5.943 2.908 1.840 H18 A1AK5 50 A1AK5 H19 H17 H 0 1 N N N N N N 1.931 -10.281 21.285 -4.690 3.917 1.106 H19 A1AK5 51 A1AK5 H12 H18 H 0 1 N N N N N N 1.036 -11.268 19.295 -3.030 2.604 2.108 H12 A1AK5 52 A1AK5 H11 H19 H 0 1 N N N N N N 1.069 -13.113 17.696 -1.534 0.672 1.915 H11 A1AK5 53 A1AK5 H H20 H 0 1 N N N N N N 1.544 -15.282 17.105 -2.096 -2.083 -0.522 H A1AK5 54 A1AK5 H20 H21 H 0 1 N N N N N N 1.229 -17.272 19.377 -3.145 -2.807 1.605 H20 A1AK5 55 A1AK5 H1 H22 H 0 1 N N N N N N 8.377 -16.161 15.746 4.841 -2.062 -1.059 H1 A1AK5 56 A1AK5 H8 H23 H 0 1 N N N N N N 8.135 -18.521 20.000 6.844 -0.560 -0.606 H8 A1AK5 57 A1AK5 H6 H24 H 0 1 N N N N N N 10.097 -20.184 21.012 8.800 2.259 1.119 H6 A1AK5 58 A1AK5 H7 H25 H 0 1 N N N N N N 11.691 -19.476 20.580 9.035 0.713 0.270 H7 A1AK5 59 A1AK5 H5 H26 H 0 1 N N N N N N 11.777 -21.713 20.114 8.206 3.224 -1.031 H5 A1AK5 60 A1AK5 H2 H28 H 0 1 N N N N N N 10.328 -22.968 18.718 10.516 3.287 -0.275 H2 A1AK5 61 A1AK5 H4 H29 H 0 1 N N N N N N 9.475 -22.300 20.151 10.751 1.740 -1.124 H4 A1AK5 62 A1AK5 H3 H30 H 0 1 N N N N N N 9.309 -21.498 18.553 10.361 3.211 -2.047 H3 A1AK5 63 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1AK5 C N SING N N 1 A1AK5 N C1 SING N N 2 A1AK5 C1 C2 SING N N 3 A1AK5 C2 C3 DOUB Y N 4 A1AK5 C3 C4 SING Y N 5 A1AK5 C4 C5 SING N N 6 A1AK5 C5 C6 DOUB Y N 7 A1AK5 C6 C7 SING Y N 8 A1AK5 C7 C8 DOUB Y N 9 A1AK5 C8 N1 SING N N 10 A1AK5 N1 C9 SING N N 11 A1AK5 C9 C10 SING N N 12 A1AK5 C10 C11 DOUB Y N 13 A1AK5 C11 C12 SING Y N 14 A1AK5 C12 C13 DOUB Y N 15 A1AK5 C13 C14 SING Y N 16 A1AK5 C15 C14 DOUB Y N 17 A1AK5 C10 C15 SING Y N 18 A1AK5 C14 S SING N N 19 A1AK5 O S DOUB N N 20 A1AK5 S O1 DOUB N N 21 A1AK5 C16 S SING N N 22 A1AK5 C17 C16 SING N N 23 A1AK5 C18 C17 SING N N 24 A1AK5 C13 C18 SING N N 25 A1AK5 C19 C9 SING N N 26 A1AK5 C20 C19 SING N N 27 A1AK5 C21 C19 SING N N 28 A1AK5 N2 C8 SING Y N 29 A1AK5 C22 N2 DOUB Y N 30 A1AK5 N3 C22 SING Y N 31 A1AK5 C23 N3 DOUB Y N 32 A1AK5 C7 C23 SING Y N 33 A1AK5 N4 C23 SING Y N 34 A1AK5 C5 N4 SING Y N 35 A1AK5 C24 C4 DOUB Y N 36 A1AK5 O2 C24 SING Y N 37 A1AK5 C2 O2 SING Y N 38 A1AK5 N1 H10 SING N N 39 A1AK5 C6 H9 SING N N 40 A1AK5 C15 H13 SING N N 41 A1AK5 C17 H16 SING N N 42 A1AK5 C17 H17 SING N N 43 A1AK5 C20 H22 SING N N 44 A1AK5 C20 H21 SING N N 45 A1AK5 C20 H23 SING N N 46 A1AK5 C21 H25 SING N N 47 A1AK5 C21 H26 SING N N 48 A1AK5 C21 H24 SING N N 49 A1AK5 C22 H27 SING N N 50 A1AK5 C24 H28 SING N N 51 A1AK5 C16 H15 SING N N 52 A1AK5 C16 H14 SING N N 53 A1AK5 C18 H18 SING N N 54 A1AK5 C18 H19 SING N N 55 A1AK5 C12 H12 SING N N 56 A1AK5 C11 H11 SING N N 57 A1AK5 C9 H SING N N 58 A1AK5 C19 H20 SING N N 59 A1AK5 N4 H1 SING N N 60 A1AK5 C3 H8 SING N N 61 A1AK5 C1 H6 SING N N 62 A1AK5 C1 H7 SING N N 63 A1AK5 N H5 SING N N 64 A1AK5 C H2 SING N N 65 A1AK5 C H4 SING N N 66 A1AK5 C H3 SING N N 67 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1AK5 SMILES ACDLabs 12.01 "CNCc1cc(co1)c1cc2c([NH]1)ncnc2NC(c1ccc2CCCS(=O)(=O)c2c1)C(C)C" A1AK5 InChI InChI 1.06 "InChI=1S/C25H29N5O3S/c1-15(2)23(17-7-6-16-5-4-8-34(31,32)22(16)10-17)30-25-20-11-21(29-24(20)27-14-28-25)18-9-19(12-26-3)33-13-18/h6-7,9-11,13-15,23,26H,4-5,8,12H2,1-3H3,(H2,27,28,29,30)/t23-/m0/s1" A1AK5 InChIKey InChI 1.06 UGVZWXXZWQCKKX-QHCPKHFHSA-N A1AK5 SMILES_CANONICAL CACTVS 3.385 "CNCc1occ(c1)c2[nH]c3ncnc(N[C@@H](C(C)C)c4ccc5CCC[S](=O)(=O)c5c4)c3c2" A1AK5 SMILES CACTVS 3.385 "CNCc1occ(c1)c2[nH]c3ncnc(N[CH](C(C)C)c4ccc5CCC[S](=O)(=O)c5c4)c3c2" A1AK5 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)[C@@H](c1ccc2c(c1)S(=O)(=O)CCC2)Nc3c4cc([nH]c4ncn3)c5cc(oc5)CNC" A1AK5 SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)C(c1ccc2c(c1)S(=O)(=O)CCC2)Nc3c4cc([nH]c4ncn3)c5cc(oc5)CNC" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1AK5 "SYSTEMATIC NAME" ACDLabs 12.01 "7-[(1S)-2-methyl-1-{[(6M)-6-{5-[(methylamino)methyl]furan-3-yl}-7H-pyrrolo[2,3-d]pyrimidin-4-yl]amino}propyl]-3,4-dihydro-1lambda~6~-benzothiopyran-1,1(2H)-dione" A1AK5 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-[(1~{S})-1-[1,1-bis(oxidanylidene)-3,4-dihydro-2~{H}-thiochromen-7-yl]-2-methyl-propyl]-6-[5-(methylaminomethyl)furan-3-yl]-7~{H}-pyrrolo[2,3-d]pyrimidin-4-amine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1AK5 "Create component" 2024-04-05 RCSB A1AK5 "Initial release" 2024-05-15 RCSB #