data_A1AKE # _chem_comp.id A1AKE _chem_comp.name "(2R)-(2,3-dihydro-1-benzofuran-5-yl)[(7H-pyrrolo[2,3-d]pyrimidine-4-carbonyl)amino]acetic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H14 N4 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-04-03 _chem_comp.pdbx_modified_date 2024-05-10 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 338.317 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1AKE _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7GZB _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1AKE N1 N1 N 0 1 Y N N N N N -0.930 9.724 -6.214 -2.492 -1.505 -0.803 N1 A1AKE 1 A1AKE N3 N2 N 0 1 Y N N N N N -0.123 9.163 -10.125 -6.133 -0.484 0.665 N3 A1AKE 2 A1AKE C4 C1 C 0 1 Y N N N N N -1.556 14.209 -4.391 2.305 -0.678 -0.997 C4 A1AKE 3 A1AKE C5 C2 C 0 1 Y N N N N N -2.227 15.403 -4.598 3.475 -1.406 -1.059 C5 A1AKE 4 A1AKE C6 C3 C 0 1 Y N N N N N -1.493 16.568 -4.739 4.489 -1.184 -0.131 C6 A1AKE 5 A1AKE C7 C4 C 0 1 Y N N N N N -0.123 16.580 -4.641 4.303 -0.215 0.848 C7 A1AKE 6 A1AKE C8 C5 C 0 1 Y N N N N N 0.540 15.374 -4.401 3.132 0.507 0.910 C8 A1AKE 7 A1AKE C10 C6 C 0 1 N N N N N N -0.900 18.615 -5.456 6.563 -0.958 0.794 C10 A1AKE 8 A1AKE C13 C7 C 0 1 Y N N N N N -0.541 9.293 -8.830 -5.000 -0.993 0.089 C13 A1AKE 9 A1AKE C15 C8 C 0 1 Y N N N N N 1.078 10.831 -9.232 -4.530 0.959 1.204 C15 A1AKE 10 A1AKE O1 O1 O 0 1 N N N N N N 0.791 13.189 -1.620 0.064 2.238 -1.843 O1 A1AKE 11 A1AKE C2 C9 C 0 1 N N N N N N 0.412 12.464 -2.538 0.893 2.186 -0.966 C2 A1AKE 12 A1AKE O2 O2 O 0 1 N N N N N N -0.177 11.306 -2.389 1.853 3.121 -0.894 O2 A1AKE 13 A1AKE C1 C10 C 0 1 N N S N N N 0.580 12.874 -3.997 0.848 1.071 0.047 C1 A1AKE 14 A1AKE N N3 N 0 1 N N N N N N 0.125 11.796 -4.864 -0.284 0.189 -0.246 N A1AKE 15 A1AKE C C11 C 0 1 N N N N N N 0.606 11.602 -6.090 -1.511 0.490 0.222 C A1AKE 16 A1AKE C11 C12 C 0 1 Y N N N N N -0.054 10.514 -6.866 -2.656 -0.402 -0.075 C11 A1AKE 17 A1AKE C16 C13 C 0 1 Y N N N N N 0.200 10.321 -8.229 -3.942 -0.107 0.403 C16 A1AKE 18 A1AKE C14 C14 C 0 1 Y N N N N N 0.851 10.107 -10.355 -5.840 0.678 1.326 C14 A1AKE 19 A1AKE N2 N4 N 0 1 Y N N N N N -1.454 8.500 -8.222 -4.732 -2.065 -0.643 N2 A1AKE 20 A1AKE C12 C15 C 0 1 Y N N N N N -1.575 8.791 -6.925 -3.508 -2.301 -1.070 C12 A1AKE 21 A1AKE O O3 O 0 1 N N N N N N 1.515 12.284 -6.572 -1.679 1.492 0.888 O A1AKE 22 A1AKE C3 C16 C 0 1 Y N N N N N -0.166 14.180 -4.264 2.130 0.282 -0.018 C3 A1AKE 23 A1AKE C9 C17 C 0 1 N N N N N N 0.346 17.998 -4.857 5.565 -0.183 1.687 C9 A1AKE 24 A1AKE O3 O4 O 0 1 N N N N N N -2.020 17.820 -4.989 5.700 -1.792 0.002 O3 A1AKE 25 A1AKE H H1 H 0 1 N N N N N N -0.465 8.498 -10.789 -7.013 -0.888 0.613 H A1AKE 26 A1AKE H4 H2 H 0 1 N N N N N N -2.116 13.288 -4.327 1.523 -0.855 -1.721 H4 A1AKE 27 A1AKE H5 H3 H 0 1 N N N N N N -3.306 15.425 -4.649 3.605 -2.151 -1.830 H5 A1AKE 28 A1AKE H6 H4 H 0 1 N N N N N N 1.617 15.367 -4.320 2.999 1.253 1.679 H6 A1AKE 29 A1AKE H9 H5 H 0 1 N N N N N N -1.007 19.657 -5.120 7.127 -0.274 0.160 H9 A1AKE 30 A1AKE H10 H6 H 0 1 N N N N N N -0.847 18.588 -6.554 7.236 -1.562 1.402 H10 A1AKE 31 A1AKE H13 H7 H 0 1 N N N N N N 1.787 11.638 -9.118 -4.014 1.811 1.620 H13 A1AKE 32 A1AKE H3 H8 H 0 1 N N N N N N -0.266 11.112 -1.463 1.841 3.816 -1.566 H3 A1AKE 33 A1AKE H2 H9 H 0 1 N N N N N N 1.650 13.051 -4.180 0.731 1.493 1.046 H2 A1AKE 34 A1AKE H1 H10 H 0 1 N N N N N N -0.580 11.174 -4.523 -0.150 -0.611 -0.778 H1 A1AKE 35 A1AKE H12 H11 H 0 1 N N N N N N 1.362 10.251 -11.296 -6.556 1.281 1.866 H12 A1AKE 36 A1AKE H11 H12 H 0 1 N N N N N N -2.288 8.194 -6.376 -3.329 -3.185 -1.664 H11 A1AKE 37 A1AKE H7 H13 H 0 1 N N N N N N 0.623 18.482 -3.909 5.901 0.842 1.846 H7 A1AKE 38 A1AKE H8 H14 H 0 1 N N N N N N 1.196 18.042 -5.554 5.415 -0.694 2.637 H8 A1AKE 39 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1AKE O C DOUB N N 1 A1AKE C N SING N N 2 A1AKE N C1 SING N N 3 A1AKE C1 C2 SING N N 4 A1AKE C2 O1 DOUB N N 5 A1AKE O2 C2 SING N N 6 A1AKE C3 C1 SING N N 7 A1AKE C3 C4 DOUB Y N 8 A1AKE C4 C5 SING Y N 9 A1AKE C5 C6 DOUB Y N 10 A1AKE C6 C7 SING Y N 11 A1AKE C7 C8 DOUB Y N 12 A1AKE C8 C3 SING Y N 13 A1AKE C9 C7 SING N N 14 A1AKE C10 C9 SING N N 15 A1AKE O3 C10 SING N N 16 A1AKE C6 O3 SING N N 17 A1AKE C11 C SING N N 18 A1AKE C11 N1 DOUB Y N 19 A1AKE N1 C12 SING Y N 20 A1AKE C12 N2 DOUB Y N 21 A1AKE N2 C13 SING Y N 22 A1AKE C13 N3 SING Y N 23 A1AKE N3 C14 SING Y N 24 A1AKE C14 C15 DOUB Y N 25 A1AKE C15 C16 SING Y N 26 A1AKE C16 C11 SING Y N 27 A1AKE C13 C16 DOUB Y N 28 A1AKE N3 H SING N N 29 A1AKE C4 H4 SING N N 30 A1AKE C5 H5 SING N N 31 A1AKE C8 H6 SING N N 32 A1AKE C10 H9 SING N N 33 A1AKE C10 H10 SING N N 34 A1AKE C15 H13 SING N N 35 A1AKE O2 H3 SING N N 36 A1AKE C1 H2 SING N N 37 A1AKE N H1 SING N N 38 A1AKE C14 H12 SING N N 39 A1AKE C12 H11 SING N N 40 A1AKE C9 H7 SING N N 41 A1AKE C9 H8 SING N N 42 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1AKE SMILES ACDLabs 12.01 "O=C(O)C(NC(=O)c1ncnc2[NH]ccc21)c1cc2CCOc2cc1" A1AKE InChI InChI 1.06 "InChI=1S/C17H14N4O4/c22-16(14-11-3-5-18-15(11)20-8-19-14)21-13(17(23)24)10-1-2-12-9(7-10)4-6-25-12/h1-3,5,7-8,13H,4,6H2,(H,21,22)(H,23,24)(H,18,19,20)" A1AKE InChIKey InChI 1.06 GWSVTAOVQPLNIX-UHFFFAOYSA-N A1AKE SMILES_CANONICAL CACTVS 3.385 "OC(=O)[C@@H](NC(=O)c1ncnc2[nH]ccc12)c3ccc4OCCc4c3" A1AKE SMILES CACTVS 3.385 "OC(=O)[CH](NC(=O)c1ncnc2[nH]ccc12)c3ccc4OCCc4c3" A1AKE SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc2c(cc1[C@@H](C(=O)O)NC(=O)c3c4cc[nH]c4ncn3)CCO2" A1AKE SMILES "OpenEye OEToolkits" 2.0.7 "c1cc2c(cc1C(C(=O)O)NC(=O)c3c4cc[nH]c4ncn3)CCO2" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1AKE "SYSTEMATIC NAME" ACDLabs 12.01 "(2R)-(2,3-dihydro-1-benzofuran-5-yl)[(7H-pyrrolo[2,3-d]pyrimidine-4-carbonyl)amino]acetic acid" A1AKE "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{S})-2-(2,3-dihydro-1-benzofuran-5-yl)-2-(7~{H}-pyrrolo[2,3-d]pyrimidin-4-ylcarbonylamino)ethanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1AKE "Create component" 2024-04-03 RCSB A1AKE "Initial release" 2024-05-15 RCSB #