data_A1AKG # _chem_comp.id A1AKG _chem_comp.name "(3R)-3-(pyridin-4-yl)-3-[(7H-pyrrolo[2,3-d]pyrimidine-4-carbonyl)amino]propanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C15 H13 N5 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-04-03 _chem_comp.pdbx_modified_date 2024-05-10 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 311.295 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1AKG _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7GZD _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1AKG N1 N1 N 0 1 Y N N N N N -0.239 15.026 -0.599 -1.878 -0.856 -1.462 N1 A1AKG 1 A1AKG N3 N2 N 0 1 Y N N N N N -3.604 15.757 1.518 -5.104 0.690 0.449 N3 A1AKG 2 A1AKG C4 C1 C 0 1 Y N N N N N -1.428 15.222 -1.220 -1.756 -0.263 -0.275 C4 A1AKG 3 A1AKG C5 C2 C 0 1 Y N N N N N -0.216 15.107 0.731 -3.050 -0.959 -2.054 C5 A1AKG 4 A1AKG C6 C3 C 0 1 Y N N N N N -2.395 15.512 0.929 -4.149 0.115 -0.345 C6 A1AKG 5 A1AKG C7 C4 C 0 1 Y N N N N N -4.548 15.878 0.518 -4.531 1.181 1.591 C7 A1AKG 6 A1AKG C8 C5 C 0 1 Y N N N N N -3.965 15.744 -0.700 -3.207 0.946 1.579 C8 A1AKG 7 A1AKG C10 C6 C 0 1 Y N N N N N -1.605 12.326 -4.600 2.490 0.931 0.027 C10 A1AKG 8 A1AKG C13 C7 C 0 1 Y N N N N N -2.712 10.667 -5.927 2.769 2.713 -1.537 C13 A1AKG 9 A1AKG O2 O1 O 0 1 N N N N N N -2.433 15.327 -3.391 -0.343 0.395 1.469 O2 A1AKG 10 A1AKG C3 C8 C 0 1 N N N N N N -1.480 14.947 -2.700 -0.436 -0.149 0.386 C3 A1AKG 11 A1AKG C9 C9 C 0 1 Y N N N N N -2.580 15.490 -0.463 -2.912 0.250 0.331 C9 A1AKG 12 A1AKG N2 N3 N 0 1 Y N N N N N -1.234 15.314 1.574 -4.162 -0.492 -1.523 N2 A1AKG 13 A1AKG N N4 N 0 1 N N N N N N -0.554 14.053 -3.125 0.663 -0.649 -0.213 N A1AKG 14 A1AKG C2 C10 C 0 1 N N S N N N -0.533 13.403 -4.441 1.983 -0.442 0.388 C2 A1AKG 15 A1AKG C1 C11 C 0 1 N N N N N N 0.883 12.751 -4.553 2.955 -1.499 -0.140 C1 A1AKG 16 A1AKG C C12 C 0 1 N N N N N N 1.206 11.983 -3.299 2.523 -2.862 0.337 C A1AKG 17 A1AKG O1 O2 O 0 1 N N N N N N 0.879 10.720 -3.344 3.165 -3.959 -0.095 O1 A1AKG 18 A1AKG O O3 O 0 1 N N N N N N 1.643 12.513 -2.304 1.599 -2.967 1.109 O A1AKG 19 A1AKG C14 C13 C 0 1 Y N N N N N -1.698 11.605 -5.782 2.290 1.450 -1.243 C14 A1AKG 20 A1AKG N4 N5 N 0 1 Y N N N N N -3.594 10.380 -4.969 3.409 3.421 -0.627 N4 A1AKG 21 A1AKG C12 C14 C 0 1 Y N N N N N -3.475 11.059 -3.823 3.611 2.961 0.593 C12 A1AKG 22 A1AKG C11 C15 C 0 1 Y N N N N N -2.510 12.026 -3.594 3.161 1.707 0.960 C11 A1AKG 23 A1AKG H1 H1 H 0 1 N N N N N N -3.775 15.835 2.500 -6.049 0.743 0.234 H1 A1AKG 24 A1AKG H6 H2 H 0 1 N N N N N N 0.755 14.990 1.190 -3.102 -1.447 -3.016 H6 A1AKG 25 A1AKG H7 H3 H 0 1 N N N N N N -5.601 16.054 0.682 -5.064 1.684 2.385 H7 A1AKG 26 A1AKG H8 H4 H 0 1 N N N N N N -4.453 15.815 -1.661 -2.497 1.220 2.345 H8 A1AKG 27 A1AKG H11 H5 H 0 1 N N N N N N -2.790 10.141 -6.867 2.618 3.124 -2.524 H11 A1AKG 28 A1AKG H5 H6 H 0 1 N N N N N N 0.178 13.816 -2.487 0.580 -1.145 -1.042 H5 A1AKG 29 A1AKG H H7 H 0 1 N N N N N N -0.646 14.153 -5.238 1.906 -0.528 1.472 H A1AKG 30 A1AKG H3 H8 H 0 1 N N N N N N 1.635 13.540 -4.699 2.957 -1.479 -1.230 H3 A1AKG 31 A1AKG H4 H9 H 0 1 N N N N N N 0.900 12.065 -5.413 3.959 -1.286 0.229 H4 A1AKG 32 A1AKG H2 H10 H 0 1 N N N N N N 1.040 10.320 -2.497 2.852 -4.811 0.239 H2 A1AKG 33 A1AKG H12 H11 H 0 1 N N N N N N -0.990 11.771 -6.580 1.768 0.875 -1.993 H12 A1AKG 34 A1AKG H10 H12 H 0 1 N N N N N N -4.173 10.840 -3.028 4.139 3.570 1.312 H10 A1AKG 35 A1AKG H9 H13 H 0 1 N N N N N N -2.463 12.539 -2.645 3.329 1.337 1.960 H9 A1AKG 36 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1AKG O C DOUB N N 1 A1AKG O1 C SING N N 2 A1AKG C C1 SING N N 3 A1AKG C1 C2 SING N N 4 A1AKG C2 N SING N N 5 A1AKG N C3 SING N N 6 A1AKG C3 O2 DOUB N N 7 A1AKG C4 C3 SING N N 8 A1AKG C4 N1 DOUB Y N 9 A1AKG N1 C5 SING Y N 10 A1AKG C5 N2 DOUB Y N 11 A1AKG N2 C6 SING Y N 12 A1AKG C6 N3 SING Y N 13 A1AKG N3 C7 SING Y N 14 A1AKG C7 C8 DOUB Y N 15 A1AKG C8 C9 SING Y N 16 A1AKG C9 C4 SING Y N 17 A1AKG C6 C9 DOUB Y N 18 A1AKG C10 C2 SING N N 19 A1AKG C10 C11 DOUB Y N 20 A1AKG C11 C12 SING Y N 21 A1AKG C12 N4 DOUB Y N 22 A1AKG N4 C13 SING Y N 23 A1AKG C13 C14 DOUB Y N 24 A1AKG C14 C10 SING Y N 25 A1AKG N3 H1 SING N N 26 A1AKG C5 H6 SING N N 27 A1AKG C7 H7 SING N N 28 A1AKG C8 H8 SING N N 29 A1AKG C13 H11 SING N N 30 A1AKG N H5 SING N N 31 A1AKG C2 H SING N N 32 A1AKG C1 H3 SING N N 33 A1AKG C1 H4 SING N N 34 A1AKG O1 H2 SING N N 35 A1AKG C14 H12 SING N N 36 A1AKG C12 H10 SING N N 37 A1AKG C11 H9 SING N N 38 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1AKG SMILES ACDLabs 12.01 "O=C(O)CC(NC(=O)c1ncnc2[NH]ccc12)c1ccncc1" A1AKG InChI InChI 1.06 "InChI=1S/C15H13N5O3/c21-12(22)7-11(9-1-4-16-5-2-9)20-15(23)13-10-3-6-17-14(10)19-8-18-13/h1-6,8,11H,7H2,(H,20,23)(H,21,22)(H,17,18,19)/t11-/m1/s1" A1AKG InChIKey InChI 1.06 HCKDZPDKIDVDLJ-LLVKDONJSA-N A1AKG SMILES_CANONICAL CACTVS 3.385 "OC(=O)C[C@H](NC(=O)c1ncnc2[nH]ccc12)c3ccncc3" A1AKG SMILES CACTVS 3.385 "OC(=O)C[CH](NC(=O)c1ncnc2[nH]ccc12)c3ccncc3" A1AKG SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1c[nH]c2c1c(ncn2)C(=O)N[C@@H](CC(=O)O)c3ccncc3" A1AKG SMILES "OpenEye OEToolkits" 2.0.7 "c1c[nH]c2c1c(ncn2)C(=O)NC(CC(=O)O)c3ccncc3" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1AKG "SYSTEMATIC NAME" ACDLabs 12.01 "(3R)-3-(pyridin-4-yl)-3-[(7H-pyrrolo[2,3-d]pyrimidine-4-carbonyl)amino]propanoic acid" A1AKG "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(3~{S})-3-pyridin-4-yl-3-(7~{H}-pyrrolo[2,3-d]pyrimidin-4-ylcarbonylamino)propanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1AKG "Create component" 2024-04-03 RCSB A1AKG "Initial release" 2024-05-15 RCSB #