data_A1AKS # _chem_comp.id A1AKS _chem_comp.name "(2R)-(2,3-dihydro-1,4-benzodioxin-6-yl)[(7H-pyrrolo[2,3-d]pyrimidin-4-yl)amino]acetic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H14 N4 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-04-04 _chem_comp.pdbx_modified_date 2024-05-10 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 326.307 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1AKS _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7GZJ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1AKS N1 N1 N 0 1 Y N N N N N 1.107 11.872 -6.991 -2.688 -1.189 -0.997 N1 A1AKS 1 A1AKS N3 N2 N 0 1 Y N N N N N -0.533 8.414 -8.343 -5.496 1.623 -0.194 N3 A1AKS 2 A1AKS C4 C1 C 0 1 Y N N N N N 0.039 9.621 -8.053 -4.695 0.582 -0.573 C4 A1AKS 3 A1AKS C5 C2 C 0 1 Y N N N N N -1.409 8.104 -7.332 -4.790 2.498 0.591 C5 A1AKS 4 A1AKS C6 C3 C 0 1 Y N N N N N -1.416 9.090 -6.399 -3.530 2.057 0.742 C6 A1AKS 5 A1AKS C7 C4 C 0 1 Y N N N N N -0.498 10.080 -6.844 -3.428 0.805 -0.005 C7 A1AKS 6 A1AKS C8 C5 C 0 1 Y N N N N N -0.212 14.137 -4.472 1.254 -0.287 0.164 C8 A1AKS 7 A1AKS C10 C6 C 0 1 Y N N N N N -2.161 15.560 -4.638 2.717 1.238 1.291 C10 A1AKS 8 A1AKS C13 C7 C 0 1 Y N N N N N 0.612 15.256 -4.530 2.266 -0.608 -0.723 C13 A1AKS 9 A1AKS C15 C8 C 0 1 N N N N N N -1.154 18.754 -5.766 6.050 0.913 -0.137 C15 A1AKS 10 A1AKS O O1 O 0 1 N N N N N N 0.085 11.141 -2.609 -1.073 -2.047 1.872 O A1AKS 11 A1AKS C C9 C 0 1 N N N N N N 0.448 12.257 -2.941 -0.206 -2.068 1.030 C A1AKS 12 A1AKS O1 O2 O 0 1 N N N N N N 0.933 13.141 -2.110 0.658 -3.094 0.983 O1 A1AKS 13 A1AKS C1 C10 C 0 1 N N S N N N 0.412 12.750 -4.384 -0.096 -0.943 0.033 C1 A1AKS 14 A1AKS N N3 N 0 1 N N N N N N -0.344 11.811 -5.186 -1.146 0.045 0.294 N A1AKS 15 A1AKS C2 C11 C 0 1 Y N N N N N 0.095 11.267 -6.334 -2.409 -0.130 -0.243 C2 A1AKS 16 A1AKS N2 N4 N 0 1 Y N N N N N 1.017 10.225 -8.751 -4.877 -0.510 -1.315 N2 A1AKS 17 A1AKS C3 C12 C 0 1 Y N N N N N 1.487 11.323 -8.150 -3.893 -1.360 -1.512 C3 A1AKS 18 A1AKS C12 C13 C 0 1 Y N N N N N 0.064 16.519 -4.647 3.509 -0.006 -0.605 C12 A1AKS 19 A1AKS O2 O3 O 0 1 N N N N N N 0.926 17.593 -4.718 4.497 -0.336 -1.482 O2 A1AKS 20 A1AKS C14 C14 C 0 1 N N N N N N 0.418 18.734 -5.464 5.610 0.561 -1.564 C14 A1AKS 21 A1AKS O3 O4 O 0 1 N N N N N N -1.925 17.900 -4.902 4.944 1.535 0.530 O3 A1AKS 22 A1AKS C11 C15 C 0 1 Y N N N N N -1.338 16.674 -4.711 3.735 0.922 0.405 C11 A1AKS 23 A1AKS C9 C16 C 0 1 Y N N N N N -1.592 14.303 -4.518 1.482 0.629 1.173 C9 A1AKS 24 A1AKS H1 H1 H 0 1 N N N N N N -0.346 7.854 -9.150 -6.428 1.728 -0.443 H1 A1AKS 25 A1AKS H5 H2 H 0 1 N N N N N N -2.006 7.205 -7.286 -5.187 3.405 1.023 H5 A1AKS 26 A1AKS H6 H3 H 0 1 N N N N N N -2.005 9.117 -5.494 -2.744 2.536 1.307 H6 A1AKS 27 A1AKS H8 H4 H 0 1 N N N N N N -3.235 15.672 -4.674 2.891 1.958 2.078 H8 A1AKS 28 A1AKS H9 H5 H 0 1 N N N N N N 1.684 15.137 -4.483 2.087 -1.329 -1.507 H9 A1AKS 29 A1AKS H12 H6 H 0 1 N N N N N N -1.516 19.786 -5.646 6.341 0.005 0.393 H12 A1AKS 30 A1AKS H13 H7 H 0 1 N N N N N N -1.311 18.428 -6.805 6.893 1.604 -0.172 H13 A1AKS 31 A1AKS H2 H8 H 0 1 N N N N N N 0.953 12.775 -1.234 0.548 -3.792 1.643 H2 A1AKS 32 A1AKS H H9 H 0 1 N N N N N N 1.444 12.807 -4.759 -0.212 -1.339 -0.976 H A1AKS 33 A1AKS H3 H10 H 0 1 N N N N N N -0.543 11.040 -4.581 -0.956 0.821 0.843 H3 A1AKS 34 A1AKS H4 H11 H 0 1 N N N N N N 2.281 11.836 -8.671 -4.077 -2.234 -2.119 H4 A1AKS 35 A1AKS H10 H12 H 0 1 N N N N N N 0.659 19.641 -4.890 5.313 1.467 -2.092 H10 A1AKS 36 A1AKS H11 H13 H 0 1 N N N N N N 0.943 18.761 -6.430 6.432 0.079 -2.094 H11 A1AKS 37 A1AKS H7 H14 H 0 1 N N N N N N -2.232 13.435 -4.459 0.691 0.874 1.867 H7 A1AKS 38 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1AKS C O DOUB N N 1 A1AKS O1 C SING N N 2 A1AKS C1 C SING N N 3 A1AKS N C1 SING N N 4 A1AKS C2 N SING N N 5 A1AKS C2 N1 DOUB Y N 6 A1AKS N1 C3 SING Y N 7 A1AKS C3 N2 DOUB Y N 8 A1AKS N2 C4 SING Y N 9 A1AKS C4 N3 SING Y N 10 A1AKS N3 C5 SING Y N 11 A1AKS C5 C6 DOUB Y N 12 A1AKS C6 C7 SING Y N 13 A1AKS C7 C2 SING Y N 14 A1AKS C4 C7 DOUB Y N 15 A1AKS C8 C1 SING N N 16 A1AKS C8 C9 DOUB Y N 17 A1AKS C9 C10 SING Y N 18 A1AKS C10 C11 DOUB Y N 19 A1AKS C11 C12 SING Y N 20 A1AKS C12 C13 DOUB Y N 21 A1AKS C13 C8 SING Y N 22 A1AKS O2 C12 SING N N 23 A1AKS C14 O2 SING N N 24 A1AKS C15 C14 SING N N 25 A1AKS O3 C15 SING N N 26 A1AKS C11 O3 SING N N 27 A1AKS N3 H1 SING N N 28 A1AKS C5 H5 SING N N 29 A1AKS C6 H6 SING N N 30 A1AKS C10 H8 SING N N 31 A1AKS C13 H9 SING N N 32 A1AKS C15 H12 SING N N 33 A1AKS C15 H13 SING N N 34 A1AKS O1 H2 SING N N 35 A1AKS C1 H SING N N 36 A1AKS N H3 SING N N 37 A1AKS C3 H4 SING N N 38 A1AKS C14 H10 SING N N 39 A1AKS C14 H11 SING N N 40 A1AKS C9 H7 SING N N 41 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1AKS SMILES ACDLabs 12.01 "O=C(O)C(Nc1ncnc2[NH]ccc21)c1ccc2OCCOc2c1" A1AKS InChI InChI 1.06 "InChI=1S/C16H14N4O4/c21-16(22)13(9-1-2-11-12(7-9)24-6-5-23-11)20-15-10-3-4-17-14(10)18-8-19-15/h1-4,7-8,13H,5-6H2,(H,21,22)(H2,17,18,19,20)" A1AKS InChIKey InChI 1.06 FHHVXLFEHODNRQ-UHFFFAOYSA-N A1AKS SMILES_CANONICAL CACTVS 3.385 "OC(=O)[C@@H](Nc1ncnc2[nH]ccc12)c3ccc4OCCOc4c3" A1AKS SMILES CACTVS 3.385 "OC(=O)[CH](Nc1ncnc2[nH]ccc12)c3ccc4OCCOc4c3" A1AKS SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc2c(cc1[C@@H](C(=O)O)Nc3c4cc[nH]c4ncn3)OCCO2" A1AKS SMILES "OpenEye OEToolkits" 2.0.7 "c1cc2c(cc1C(C(=O)O)Nc3c4cc[nH]c4ncn3)OCCO2" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1AKS "SYSTEMATIC NAME" ACDLabs 12.01 "(2R)-(2,3-dihydro-1,4-benzodioxin-6-yl)[(7H-pyrrolo[2,3-d]pyrimidin-4-yl)amino]acetic acid" A1AKS "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{S})-2-(2,3-dihydro-1,4-benzodioxin-6-yl)-2-(7~{H}-pyrrolo[2,3-d]pyrimidin-4-ylamino)ethanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1AKS "Create component" 2024-04-04 RCSB A1AKS "Initial release" 2024-05-15 RCSB #