data_A1AKV # _chem_comp.id A1AKV _chem_comp.name "3-cyclopropyl-N-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)-L-alanine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H14 N4 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-04-04 _chem_comp.pdbx_modified_date 2024-05-10 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 246.265 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1AKV _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7GZO _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1AKV N1 N1 N 0 1 Y N N N N N 1.105 12.016 -7.225 -0.868 -1.155 -1.125 N1 A1AKV 1 A1AKV N3 N2 N 0 1 Y N N N N N -0.626 8.732 -8.886 -4.104 0.842 0.281 N3 A1AKV 2 A1AKV C4 C1 C 0 1 N N N N N N -2.039 14.219 -2.665 2.697 2.892 -0.049 C4 A1AKV 3 A1AKV C5 C2 C 0 1 N N N N N N -2.398 15.331 -3.619 3.990 2.509 -0.771 C5 A1AKV 4 A1AKV C6 C3 C 0 1 Y N N N N N 0.129 11.334 -6.591 -0.748 -0.224 -0.184 C6 A1AKV 5 A1AKV C7 C4 C 0 1 Y N N N N N 1.525 11.533 -8.393 -2.047 -1.461 -1.635 C7 A1AKV 6 A1AKV C8 C5 C 0 1 Y N N N N N 0.075 9.814 -8.416 -3.144 0.070 -0.314 C8 A1AKV 7 A1AKV C10 C6 C 0 1 Y N N N N N -1.528 9.259 -6.895 -2.202 1.473 1.238 C10 A1AKV 8 A1AKV O O1 O 0 1 N N N N N N 1.162 12.864 -2.227 1.056 -2.200 1.480 O A1AKV 9 A1AKV C C7 C 0 1 N N N N N N 0.583 12.243 -3.108 1.857 -1.890 0.630 C A1AKV 10 A1AKV O1 O2 O 0 1 N N N N N N 0.042 11.095 -2.912 2.896 -2.696 0.361 O1 A1AKV 11 A1AKV C1 C8 C 0 1 N N S N N N 0.431 12.734 -4.545 1.689 -0.599 -0.128 C1 A1AKV 12 A1AKV C2 C9 C 0 1 N N N N N N -0.293 14.085 -4.604 2.914 0.289 0.100 C2 A1AKV 13 A1AKV C3 C10 C 0 1 N N N N N N -1.752 14.058 -4.146 2.802 1.545 -0.767 C3 A1AKV 14 A1AKV N N3 N 0 1 N N N N N N -0.252 11.753 -5.375 0.489 0.094 0.347 N A1AKV 15 A1AKV C11 C11 C 0 1 Y N N N N N -0.453 10.172 -7.168 -1.910 0.429 0.257 C11 A1AKV 16 A1AKV C9 C12 C 0 1 Y N N N N N -1.598 8.413 -7.956 -3.529 1.676 1.206 C9 A1AKV 17 A1AKV N2 N4 N 0 1 Y N N N N N 1.076 10.456 -9.048 -3.161 -0.876 -1.252 N2 A1AKV 18 A1AKV H1 H1 H 0 1 N N N N N N -0.462 8.257 -9.751 -5.052 0.806 0.079 H1 A1AKV 19 A1AKV H7 H2 H 0 1 N N N N N N -2.834 13.624 -2.192 2.707 2.884 1.041 H7 A1AKV 20 A1AKV H6 H3 H 0 1 N N N N N N -1.208 14.351 -1.956 2.073 3.660 -0.507 H6 A1AKV 21 A1AKV H9 H4 H 0 1 N N N N N N -3.454 15.545 -3.842 4.217 3.025 -1.704 H9 A1AKV 22 A1AKV H8 H5 H 0 1 N N N N N N -1.828 16.272 -3.606 4.852 2.249 -0.156 H8 A1AKV 23 A1AKV H11 H6 H 0 1 N N N N N N 2.326 12.078 -8.870 -2.099 -2.224 -2.398 H11 A1AKV 24 A1AKV H13 H7 H 0 1 N N N N N N -2.158 9.247 -6.018 -1.488 1.983 1.868 H13 A1AKV 25 A1AKV H2 H8 H 0 1 N N N N N N 0.169 10.835 -2.007 2.961 -3.513 0.874 H2 A1AKV 26 A1AKV H H9 H 0 1 N N N N N N 1.442 12.886 -4.950 1.588 -0.812 -1.192 H A1AKV 27 A1AKV H4 H10 H 0 1 N N N N N N 0.253 14.793 -3.963 2.965 0.576 1.150 H4 A1AKV 28 A1AKV H3 H11 H 0 1 N N N N N N -0.269 14.440 -5.645 3.816 -0.259 -0.171 H3 A1AKV 29 A1AKV H5 H12 H 0 1 N N N N N N -2.415 13.373 -4.695 2.248 1.426 -1.698 H5 A1AKV 30 A1AKV H10 H13 H 0 1 N N N N N N -0.295 10.925 -4.816 0.562 0.776 1.033 H10 A1AKV 31 A1AKV H12 H14 H 0 1 N N N N N N -2.310 7.608 -8.058 -4.064 2.388 1.817 H12 A1AKV 32 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1AKV C O DOUB N N 1 A1AKV O1 C SING N N 2 A1AKV C1 C SING N N 3 A1AKV C2 C1 SING N N 4 A1AKV C3 C2 SING N N 5 A1AKV C3 C4 SING N N 6 A1AKV C4 C5 SING N N 7 A1AKV C5 C3 SING N N 8 A1AKV N C1 SING N N 9 A1AKV C6 N SING N N 10 A1AKV C6 N1 DOUB Y N 11 A1AKV N1 C7 SING Y N 12 A1AKV C7 N2 DOUB Y N 13 A1AKV N2 C8 SING Y N 14 A1AKV C8 N3 SING Y N 15 A1AKV N3 C9 SING Y N 16 A1AKV C9 C10 DOUB Y N 17 A1AKV C10 C11 SING Y N 18 A1AKV C11 C6 SING Y N 19 A1AKV C8 C11 DOUB Y N 20 A1AKV N3 H1 SING N N 21 A1AKV C4 H7 SING N N 22 A1AKV C4 H6 SING N N 23 A1AKV C5 H9 SING N N 24 A1AKV C5 H8 SING N N 25 A1AKV C7 H11 SING N N 26 A1AKV C10 H13 SING N N 27 A1AKV O1 H2 SING N N 28 A1AKV C1 H SING N N 29 A1AKV C2 H4 SING N N 30 A1AKV C2 H3 SING N N 31 A1AKV C3 H5 SING N N 32 A1AKV N H10 SING N N 33 A1AKV C9 H12 SING N N 34 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1AKV SMILES ACDLabs 12.01 "O=C(O)C(CC1CC1)Nc1ncnc2[NH]ccc21" A1AKV InChI InChI 1.06 "InChI=1S/C12H14N4O2/c17-12(18)9(5-7-1-2-7)16-11-8-3-4-13-10(8)14-6-15-11/h3-4,6-7,9H,1-2,5H2,(H,17,18)(H2,13,14,15,16)" A1AKV InChIKey InChI 1.06 HLKVRUDJSKGFAD-UHFFFAOYSA-N A1AKV SMILES_CANONICAL CACTVS 3.385 "OC(=O)[C@H](CC1CC1)Nc2ncnc3[nH]ccc23" A1AKV SMILES CACTVS 3.385 "OC(=O)[CH](CC1CC1)Nc2ncnc3[nH]ccc23" A1AKV SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1c[nH]c2c1c(ncn2)N[C@@H](CC3CC3)C(=O)O" A1AKV SMILES "OpenEye OEToolkits" 2.0.7 "c1c[nH]c2c1c(ncn2)NC(CC3CC3)C(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1AKV "SYSTEMATIC NAME" ACDLabs 12.01 "3-cyclopropyl-N-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)-L-alanine" A1AKV "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{S})-3-cyclopropyl-2-(7~{H}-pyrrolo[2,3-d]pyrimidin-4-ylamino)propanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1AKV "Create component" 2024-04-04 RCSB A1AKV "Initial release" 2024-05-15 RCSB #