data_A1ALE # _chem_comp.id A1ALE _chem_comp.name "(2S)-2-amino-7-(dimethylamino)-7-oxoheptanoic acid" _chem_comp.type "L-peptide linking" _chem_comp.pdbx_type HETAIN _chem_comp.formula "C9 H18 N2 O3" _chem_comp.mon_nstd_parent_comp_id ALA _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-04-08 _chem_comp.pdbx_modified_date 2024-09-27 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 202.251 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1ALE _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9BC2 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1ALE CA C1 C 0 1 N N S N Y N -37.833 32.361 22.819 -3.067 -0.549 0.279 CA A1ALE 1 A1ALE C C2 C 0 1 N N N N Y Y -37.963 31.524 21.530 -4.311 0.286 0.109 C A1ALE 2 A1ALE CB C3 C 0 1 N N N N N N -36.900 31.748 23.888 -1.836 0.299 -0.047 CB A1ALE 3 A1ALE O O1 O 0 1 N N N N Y Y -38.301 30.390 21.612 -4.972 0.186 -0.897 O A1ALE 4 A1ALE N N1 N 0 1 N N N Y Y N -39.167 32.264 23.279 -3.123 -1.701 -0.630 N A1ALE 5 A1ALE CG C4 C 0 1 N N N N N N -35.441 32.304 23.829 -0.569 -0.508 0.245 C17 A1ALE 6 A1ALE CD C5 C 0 1 N N N N N N -34.518 31.640 24.916 0.662 0.340 -0.080 C18 A1ALE 7 A1ALE CE C6 C 0 1 N N N N N N -33.118 31.265 24.315 1.929 -0.467 0.212 C19 A1ALE 8 A1ALE CZ C7 C 0 1 N N N N N N -32.588 29.838 24.623 3.141 0.368 -0.109 C20 A1ALE 9 A1ALE O7 O2 O 0 1 N N N N N N -33.313 29.070 25.160 3.006 1.497 -0.530 O24 A1ALE 10 A1ALE N7 N2 N 0 1 N N N N N N -31.198 29.468 24.240 4.377 -0.140 0.071 N3 A1ALE 11 A1ALE C81 C8 C 0 1 N N N N N N -30.332 30.425 23.574 4.540 -1.505 0.580 C23 A1ALE 12 A1ALE C82 C9 C 0 1 N N N N N N -30.636 28.137 24.505 5.556 0.672 -0.241 C22 A1ALE 13 A1ALE HA H1 H 0 1 N N N N Y N -37.535 33.394 22.587 -3.004 -0.900 1.309 HA A1ALE 14 A1ALE HB1 H3 H 0 1 N N N N N N -37.317 31.967 24.882 -1.855 0.577 -1.100 HB1 A1ALE 15 A1ALE HB2 H4 H 0 1 N N N N N N -36.865 30.659 23.737 -1.842 1.200 0.567 HB2 A1ALE 16 A1ALE H H5 H 0 1 N N N Y Y N -39.262 32.769 24.137 -3.891 -2.311 -0.394 H A1ALE 17 A1ALE H2 H6 H 0 1 N N N Y Y N -39.785 32.651 22.594 -3.182 -1.401 -1.591 H2 A1ALE 18 A1ALE HG1 H8 H 0 1 N N N N N N -35.022 32.099 22.833 -0.550 -0.786 1.299 H8 A1ALE 19 A1ALE HG2 H9 H 0 1 N N N N N N -35.467 33.390 23.999 -0.563 -1.409 -0.368 H9 A1ALE 20 A1ALE HD1 H10 H 0 1 N N N N N N -34.375 32.347 25.746 0.643 0.618 -1.134 H10 A1ALE 21 A1ALE HD2 H11 H 0 1 N N N N N N -35.004 30.727 25.291 0.656 1.241 0.533 H11 A1ALE 22 A1ALE HE1 H12 H 0 1 N N N N N N -32.384 31.985 24.705 1.947 -0.745 1.265 H12 A1ALE 23 A1ALE HE2 H13 H 0 1 N N N N N N -33.186 31.367 23.222 1.935 -1.368 -0.402 H13 A1ALE 24 A1ALE H14 H14 H 0 1 N N N N N N -30.871 31.374 23.437 4.588 -1.483 1.668 H14 A1ALE 25 A1ALE H15 H15 H 0 1 N N N N N N -29.436 30.598 24.188 3.693 -2.114 0.265 H15 A1ALE 26 A1ALE H16 H16 H 0 1 N N N N N N -30.033 30.028 22.593 5.462 -1.932 0.184 H16 A1ALE 27 A1ALE H17 H17 H 0 1 N N N N N N -31.389 27.514 25.009 5.238 1.649 -0.604 H17 A1ALE 28 A1ALE H18 H18 H 0 1 N N N N N N -30.347 27.665 23.554 6.159 0.796 0.658 H18 A1ALE 29 A1ALE H19 H19 H 0 1 N N N N N N -29.750 28.235 25.150 6.147 0.173 -1.009 H19 A1ALE 30 A1ALE OXT OXT O 0 1 N N N N Y Y ? ? ? -4.684 1.139 1.076 OXT A1ALE 31 A1ALE H1 H20 H 0 1 N N N N N N ? ? ? -5.489 1.653 0.921 H1 A1ALE 32 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1ALE C O DOUB N N 1 A1ALE C CA SING N N 2 A1ALE CA N SING N N 3 A1ALE CA CB SING N N 4 A1ALE C81 N7 SING N N 5 A1ALE CG CB SING N N 6 A1ALE CG CD SING N N 7 A1ALE N7 C82 SING N N 8 A1ALE N7 CZ SING N N 9 A1ALE CE CZ SING N N 10 A1ALE CE CD SING N N 11 A1ALE CZ O7 DOUB N N 12 A1ALE CA HA SING N N 13 A1ALE CB HB1 SING N N 14 A1ALE CB HB2 SING N N 15 A1ALE N H SING N N 16 A1ALE N H2 SING N N 17 A1ALE CG HG1 SING N N 18 A1ALE CG HG2 SING N N 19 A1ALE CD HD1 SING N N 20 A1ALE CD HD2 SING N N 21 A1ALE CE HE1 SING N N 22 A1ALE CE HE2 SING N N 23 A1ALE C81 H14 SING N N 24 A1ALE C81 H15 SING N N 25 A1ALE C81 H16 SING N N 26 A1ALE C82 H17 SING N N 27 A1ALE C82 H18 SING N N 28 A1ALE C82 H19 SING N N 29 A1ALE C OXT SING N N 30 A1ALE OXT H1 SING N N 31 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1ALE SMILES ACDLabs 12.01 "NC(CCCCC(=O)N(C)C)C(=O)O" A1ALE InChI InChI 1.06 "InChI=1S/C9H18N2O3/c1-11(2)8(12)6-4-3-5-7(10)9(13)14/h7H,3-6,10H2,1-2H3,(H,13,14)/t7-/m0/s1" A1ALE InChIKey InChI 1.06 PZGZIGICAVVNEB-ZETCQYMHSA-N A1ALE SMILES_CANONICAL CACTVS 3.385 "CN(C)C(=O)CCCC[C@H](N)C(O)=O" A1ALE SMILES CACTVS 3.385 "CN(C)C(=O)CCCC[CH](N)C(O)=O" A1ALE SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN(C)C(=O)CCCC[C@@H](C(=O)O)N" A1ALE SMILES "OpenEye OEToolkits" 2.0.7 "CN(C)C(=O)CCCCC(C(=O)O)N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1ALE "SYSTEMATIC NAME" ACDLabs 12.01 "(2S)-2-amino-7-(dimethylamino)-7-oxoheptanoic acid" A1ALE "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{S})-2-azanyl-7-(dimethylamino)-7-oxidanylidene-heptanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1ALE "Create component" 2024-04-08 RCSB A1ALE "Initial release" 2024-07-03 RCSB A1ALE "Modify PCM" 2024-09-27 PDBE # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id A1ALE _pdbx_chem_comp_pcm.modified_residue_id ? _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Non-standard residue" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom ? _pdbx_chem_comp_pcm.modified_residue_id_linking_atom ? _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #