data_A1AM6 # _chem_comp.id A1AM6 _chem_comp.name "2-[4-(propan-2-yl)piperazin-1-yl]pyrimidine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C11 H18 N4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-04-15 _chem_comp.pdbx_modified_date 2024-04-19 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 206.287 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1AM6 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7H3Q _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1AM6 N1 N1 N 0 1 N N N N N N 8.746 21.407 28.297 -0.468 -0.007 0.394 N1 A1AM6 1 A1AM6 N3 N2 N 0 1 Y N N N N N 8.558 19.341 29.328 -2.501 1.144 0.468 N3 A1AM6 2 A1AM6 C4 C1 C 0 1 N N N N N N 8.429 22.307 27.183 0.204 1.065 -0.354 C4 A1AM6 3 A1AM6 C5 C2 C 0 1 N N N N N N 10.139 21.565 28.730 0.081 -1.322 0.033 C5 A1AM6 4 A1AM6 C6 C3 C 0 1 N N N N N N 11.099 21.293 27.580 1.580 -1.348 0.344 C6 A1AM6 5 A1AM6 C7 C4 C 0 1 Y N N N N N 7.997 20.287 28.551 -1.837 0.030 0.193 C7 A1AM6 6 A1AM6 C8 C5 C 0 1 Y N N N N N 6.114 19.074 28.156 -3.760 -1.045 -0.473 C8 A1AM6 7 A1AM6 C10 C6 C 0 1 Y N N N N N 7.829 18.225 29.490 -3.809 1.213 0.287 C10 A1AM6 8 A1AM6 N N3 N 0 1 N N N N N N 10.737 22.033 26.360 2.251 -0.276 -0.404 N A1AM6 9 A1AM6 C C7 C 0 1 N N N N N N 12.993 21.573 25.366 4.379 0.731 -1.080 C A1AM6 10 A1AM6 C1 C8 C 0 1 N N N N N N 11.878 22.582 25.594 3.704 -0.316 -0.191 C1 A1AM6 11 A1AM6 C2 C9 C 0 1 N N N N N N 11.442 23.201 24.279 4.013 -0.014 1.277 C2 A1AM6 12 A1AM6 C3 C10 C 0 1 N N N N N N 9.674 23.005 26.660 1.702 1.038 -0.044 C3 A1AM6 13 A1AM6 C9 C11 C 0 1 Y N N N N N 6.594 18.030 28.913 -4.485 0.103 -0.196 C9 A1AM6 14 A1AM6 N2 N4 N 0 1 Y N N N N N 6.787 20.218 27.960 -2.453 -1.048 -0.270 N2 A1AM6 15 A1AM6 H9 H1 H 0 1 N N N N N N 7.712 23.066 27.529 0.051 0.913 -1.423 H9 A1AM6 16 A1AM6 H10 H2 H 0 1 N N N N N N 7.978 21.722 26.368 -0.212 2.029 -0.061 H10 A1AM6 17 A1AM6 H11 H3 H 0 1 N N N N N N 10.290 22.593 29.090 -0.423 -2.097 0.609 H11 A1AM6 18 A1AM6 H12 H4 H 0 1 N N N N N N 10.345 20.857 29.546 -0.073 -1.500 -1.031 H12 A1AM6 19 A1AM6 H13 H5 H 0 1 N N N N N N 12.112 21.592 27.887 1.732 -1.196 1.412 H13 A1AM6 20 A1AM6 H14 H6 H 0 1 N N N N N N 11.087 20.216 27.357 1.995 -2.312 0.050 H14 A1AM6 21 A1AM6 H15 H7 H 0 1 N N N N N N 5.143 18.967 27.695 -4.256 -1.927 -0.850 H15 A1AM6 22 A1AM6 H17 H8 H 0 1 N N N N N N 8.234 17.437 30.107 -4.345 2.123 0.513 H17 A1AM6 23 A1AM6 H1 H10 H 0 1 N N N N N N 13.295 21.136 26.329 4.159 0.516 -2.125 H1 A1AM6 24 A1AM6 H H11 H 0 1 N N N N N N 12.635 20.776 24.698 4.002 1.721 -0.825 H A1AM6 25 A1AM6 H2 H12 H 0 1 N N N N N N 13.855 22.077 24.906 5.457 0.701 -0.921 H2 A1AM6 26 A1AM6 H3 H13 H 0 1 N N N N N N 12.309 23.395 26.196 4.082 -1.306 -0.445 H3 A1AM6 27 A1AM6 H4 H14 H 0 1 N N N N N N 10.636 23.927 24.464 3.532 -0.760 1.910 H4 A1AM6 28 A1AM6 H5 H15 H 0 1 N N N N N N 12.297 23.713 23.814 5.091 -0.044 1.435 H5 A1AM6 29 A1AM6 H6 H16 H 0 1 N N N N N N 11.077 22.412 23.606 3.635 0.976 1.531 H6 A1AM6 30 A1AM6 H7 H17 H 0 1 N N N N N N 10.037 23.711 27.421 2.207 1.814 -0.620 H7 A1AM6 31 A1AM6 H8 H18 H 0 1 N N N N N N 9.419 23.554 25.742 1.856 1.217 1.020 H8 A1AM6 32 A1AM6 H16 H19 H 0 1 N N N N N N 6.037 17.115 29.046 -5.553 0.132 -0.352 H16 A1AM6 33 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1AM6 C C1 SING N N 1 A1AM6 C1 C2 SING N N 2 A1AM6 N C1 SING N N 3 A1AM6 N C3 SING N N 4 A1AM6 C3 C4 SING N N 5 A1AM6 C4 N1 SING N N 6 A1AM6 N1 C5 SING N N 7 A1AM6 C5 C6 SING N N 8 A1AM6 C6 N SING N N 9 A1AM6 C7 N1 SING N N 10 A1AM6 C7 N2 DOUB Y N 11 A1AM6 N2 C8 SING Y N 12 A1AM6 C8 C9 DOUB Y N 13 A1AM6 C9 C10 SING Y N 14 A1AM6 C10 N3 DOUB Y N 15 A1AM6 N3 C7 SING Y N 16 A1AM6 C4 H9 SING N N 17 A1AM6 C4 H10 SING N N 18 A1AM6 C5 H11 SING N N 19 A1AM6 C5 H12 SING N N 20 A1AM6 C6 H13 SING N N 21 A1AM6 C6 H14 SING N N 22 A1AM6 C8 H15 SING N N 23 A1AM6 C10 H17 SING N N 24 A1AM6 C H1 SING N N 25 A1AM6 C H SING N N 26 A1AM6 C H2 SING N N 27 A1AM6 C1 H3 SING N N 28 A1AM6 C2 H4 SING N N 29 A1AM6 C2 H5 SING N N 30 A1AM6 C2 H6 SING N N 31 A1AM6 C3 H7 SING N N 32 A1AM6 C3 H8 SING N N 33 A1AM6 C9 H16 SING N N 34 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1AM6 SMILES ACDLabs 12.01 "CC(C)N1CCN(CC1)c1ncccn1" A1AM6 InChI InChI 1.06 "InChI=1S/C11H18N4/c1-10(2)14-6-8-15(9-7-14)11-12-4-3-5-13-11/h3-5,10H,6-9H2,1-2H3" A1AM6 InChIKey InChI 1.06 JMSBGUKOMZSBMF-UHFFFAOYSA-N A1AM6 SMILES_CANONICAL CACTVS 3.385 "CC(C)N1CCN(CC1)c2ncccn2" A1AM6 SMILES CACTVS 3.385 "CC(C)N1CCN(CC1)c2ncccn2" A1AM6 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)N1CCN(CC1)c2ncccn2" A1AM6 SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)N1CCN(CC1)c2ncccn2" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1AM6 "SYSTEMATIC NAME" ACDLabs 12.01 "2-[4-(propan-2-yl)piperazin-1-yl]pyrimidine" A1AM6 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-(4-propan-2-ylpiperazin-1-yl)pyrimidine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1AM6 "Create component" 2024-04-15 RCSB A1AM6 "Initial release" 2024-04-24 RCSB #