data_A1AML # _chem_comp.id A1AML _chem_comp.name "6-{(1S)-2-methyl-1-[(7H-pyrrolo[2,3-d]pyrimidin-4-yl)amino]propyl}-2,3-dihydro-4H-1,4lambda~6~-benzoxathiine-4,4-dione" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H20 N4 O3 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-04-11 _chem_comp.pdbx_modified_date 2024-05-10 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 372.441 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1AML _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7H0J _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1AML N1 N1 N 0 1 Y N N N N N -10.369 -7.372 18.960 -3.225 -1.331 0.674 N1 A1AML 1 A1AML N3 N2 N 0 1 Y N N N N N -14.265 -8.408 19.365 -6.139 1.488 0.692 N3 A1AML 2 A1AML C4 C1 C 0 1 Y N N N N N -10.798 -8.604 18.612 -3.027 -0.131 0.137 C4 A1AML 3 A1AML C5 C2 C 0 1 Y N N N N N -11.272 -6.513 19.461 -4.380 -1.646 1.232 C5 A1AML 4 A1AML C6 C3 C 0 1 Y N N N N N -12.992 -7.928 19.292 -5.291 0.418 0.782 C6 A1AML 5 A1AML C7 C4 C 0 1 Y N N N N N -14.265 -9.693 18.873 -5.515 2.530 0.056 C7 A1AML 6 A1AML C8 C5 C 0 1 Y N N N N N -13.014 -10.049 18.487 -4.264 2.173 -0.280 C8 A1AML 7 A1AML C10 C6 C 0 1 Y N N N N N -8.436 -9.062 16.219 0.592 -0.075 -0.572 C10 A1AML 8 A1AML C13 C7 C 0 1 Y N N N N N -8.306 -8.790 13.425 3.044 1.226 -0.759 C13 A1AML 9 A1AML C15 C8 C 0 1 Y N N N N N -8.926 -10.062 15.392 1.681 -0.533 0.146 C15 A1AML 10 A1AML C17 C9 C 0 1 N N N N N N -8.169 -9.661 11.232 5.231 1.865 0.073 C17 A1AML 11 A1AML O1 O1 O 0 1 N N N N N N -8.908 -12.387 13.236 3.995 -0.015 2.333 O1 A1AML 12 A1AML S S1 S 0 1 N N N N N N -9.606 -11.143 13.041 4.259 -0.475 1.015 S A1AML 13 A1AML O O2 O 0 1 N N N N N N -11.010 -11.149 13.264 4.327 -1.863 0.718 O A1AML 14 A1AML C16 C10 C 0 1 N N N N N N -9.315 -10.561 11.413 5.678 0.410 0.295 C16 A1AML 15 A1AML O2 O3 O 0 1 N N N N N N -8.198 -8.541 12.077 4.210 1.892 -0.913 O2 A1AML 16 A1AML C12 C11 C 0 1 Y N N N N N -7.794 -7.818 14.249 1.939 1.686 -1.475 C12 A1AML 17 A1AML C11 C12 C 0 1 Y N N N N N -7.882 -7.934 15.628 0.725 1.039 -1.380 C11 A1AML 18 A1AML C14 C13 C 0 1 Y N N N N N -8.888 -9.924 14.005 2.897 0.117 0.058 C14 A1AML 19 A1AML C3 C14 C 0 1 N N S N N N -8.528 -9.183 17.729 -0.731 -0.789 -0.479 C3 A1AML 20 A1AML C1 C15 C 0 1 N N N N N N -7.547 -10.247 18.294 -0.905 -1.701 -1.695 C1 A1AML 21 A1AML C2 C16 C 0 1 N N N N N N -6.121 -9.983 17.842 0.228 -2.728 -1.729 C2 A1AML 22 A1AML C C17 C 0 1 N N N N N N -7.622 -10.348 19.838 -2.249 -2.427 -1.600 C A1AML 23 A1AML N N3 N 0 1 N N N N N N -9.897 -9.503 18.134 -1.816 0.194 -0.446 N A1AML 24 A1AML C9 C18 C 0 1 Y N N N N N -12.175 -8.935 18.752 -4.079 0.798 0.178 C9 A1AML 25 A1AML N2 N4 N 0 1 Y N N N N N -12.588 -6.695 19.669 -5.392 -0.808 1.291 N2 A1AML 26 A1AML H1 H1 H 0 1 N N N N N N -15.060 -7.913 19.715 -7.049 1.507 1.028 H1 A1AML 27 A1AML H10 H2 H 0 1 N N N N N N -10.888 -5.541 19.735 -4.499 -2.632 1.655 H10 A1AML 28 A1AML H11 H3 H 0 1 N N N N N N -15.136 -10.327 18.804 -5.961 3.492 -0.146 H11 A1AML 29 A1AML H12 H4 H 0 1 N N N N N N -12.715 -10.995 18.061 -3.536 2.785 -0.791 H12 A1AML 30 A1AML H15 H5 H 0 1 N N N N N N -9.342 -10.958 15.828 1.581 -1.402 0.778 H15 A1AML 31 A1AML H18 H6 H 0 1 N N N N N N -7.247 -10.226 11.434 4.846 2.274 1.008 H18 A1AML 32 A1AML H19 H7 H 0 1 N N N N N N -8.163 -9.310 10.189 6.080 2.460 -0.263 H19 A1AML 33 A1AML H16 H8 H 0 1 N N N N N N -9.156 -11.438 10.768 5.956 -0.043 -0.657 H16 A1AML 34 A1AML H17 H9 H 0 1 N N N N N N -10.217 -10.023 11.085 6.523 0.381 0.983 H17 A1AML 35 A1AML H14 H10 H 0 1 N N N N N N -7.316 -6.951 13.817 2.034 2.555 -2.109 H14 A1AML 36 A1AML H13 H11 H 0 1 N N N N N N -7.514 -7.134 16.253 -0.124 1.403 -1.939 H13 A1AML 37 A1AML H H12 H 0 1 N N N N N N -8.250 -8.212 18.165 -0.757 -1.389 0.431 H A1AML 38 A1AML H5 H13 H 0 1 N N N N N N -7.852 -11.222 17.886 -0.880 -1.101 -2.605 H5 A1AML 39 A1AML H7 H14 H 0 1 N N N N N N -6.090 -9.915 16.745 0.202 -3.328 -0.819 H7 A1AML 40 A1AML H6 H15 H 0 1 N N N N N N -5.768 -9.037 18.278 0.104 -3.378 -2.596 H6 A1AML 41 A1AML H8 H16 H 0 1 N N N N N N -5.472 -10.806 18.177 1.185 -2.211 -1.797 H8 A1AML 42 A1AML H2 H17 H 0 1 N N N N N N -8.661 -10.539 20.143 -3.056 -1.694 -1.576 H2 A1AML 43 A1AML H3 H18 H 0 1 N N N N N N -6.981 -11.173 20.183 -2.373 -3.076 -2.467 H3 A1AML 44 A1AML H4 H19 H 0 1 N N N N N N -7.276 -9.404 20.284 -2.275 -3.026 -0.690 H4 A1AML 45 A1AML H9 H20 H 0 1 N N N N N N -10.326 -9.908 17.327 -1.685 1.074 -0.834 H9 A1AML 46 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1AML C C1 SING N N 1 A1AML C2 C1 SING N N 2 A1AML C1 C3 SING N N 3 A1AML N C3 SING N N 4 A1AML C4 N SING N N 5 A1AML C4 N1 DOUB Y N 6 A1AML N1 C5 SING Y N 7 A1AML C5 N2 DOUB Y N 8 A1AML N2 C6 SING Y N 9 A1AML C6 N3 SING Y N 10 A1AML N3 C7 SING Y N 11 A1AML C7 C8 DOUB Y N 12 A1AML C8 C9 SING Y N 13 A1AML C9 C4 SING Y N 14 A1AML C6 C9 DOUB Y N 15 A1AML C3 C10 SING N N 16 A1AML C10 C11 DOUB Y N 17 A1AML C11 C12 SING Y N 18 A1AML C12 C13 DOUB Y N 19 A1AML C13 C14 SING Y N 20 A1AML C15 C14 DOUB Y N 21 A1AML C10 C15 SING Y N 22 A1AML C14 S SING N N 23 A1AML O S DOUB N N 24 A1AML S O1 DOUB N N 25 A1AML C16 S SING N N 26 A1AML C17 C16 SING N N 27 A1AML O2 C17 SING N N 28 A1AML C13 O2 SING N N 29 A1AML N3 H1 SING N N 30 A1AML C5 H10 SING N N 31 A1AML C7 H11 SING N N 32 A1AML C8 H12 SING N N 33 A1AML C15 H15 SING N N 34 A1AML C17 H18 SING N N 35 A1AML C17 H19 SING N N 36 A1AML C16 H16 SING N N 37 A1AML C16 H17 SING N N 38 A1AML C12 H14 SING N N 39 A1AML C11 H13 SING N N 40 A1AML C3 H SING N N 41 A1AML C1 H5 SING N N 42 A1AML C2 H7 SING N N 43 A1AML C2 H6 SING N N 44 A1AML C2 H8 SING N N 45 A1AML C H2 SING N N 46 A1AML C H3 SING N N 47 A1AML C H4 SING N N 48 A1AML N H9 SING N N 49 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1AML SMILES ACDLabs 12.01 "CC(C)C(Nc1ncnc2[NH]ccc21)c1ccc2OCCS(=O)(=O)c2c1" A1AML InChI InChI 1.06 "InChI=1S/C18H20N4O3S/c1-11(2)16(22-18-13-5-6-19-17(13)20-10-21-18)12-3-4-14-15(9-12)26(23,24)8-7-25-14/h3-6,9-11,16H,7-8H2,1-2H3,(H2,19,20,21,22)/t16-/m0/s1" A1AML InChIKey InChI 1.06 CZXKHZZOXXFNSF-INIZCTEOSA-N A1AML SMILES_CANONICAL CACTVS 3.385 "CC(C)[C@H](Nc1ncnc2[nH]ccc12)c3ccc4OCC[S](=O)(=O)c4c3" A1AML SMILES CACTVS 3.385 "CC(C)[CH](Nc1ncnc2[nH]ccc12)c3ccc4OCC[S](=O)(=O)c4c3" A1AML SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)[C@@H](c1ccc2c(c1)S(=O)(=O)CCO2)Nc3c4cc[nH]c4ncn3" A1AML SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)C(c1ccc2c(c1)S(=O)(=O)CCO2)Nc3c4cc[nH]c4ncn3" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1AML "SYSTEMATIC NAME" ACDLabs 12.01 "6-{(1S)-2-methyl-1-[(7H-pyrrolo[2,3-d]pyrimidin-4-yl)amino]propyl}-2,3-dihydro-4H-1,4lambda~6~-benzoxathiine-4,4-dione" A1AML "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-[(1~{S})-1-[4,4-bis(oxidanylidene)-2,3-dihydro-1,4$l^{6}-benzoxathiin-6-yl]-2-methyl-propyl]-7~{H}-pyrrolo[2,3-d]pyrimidin-4-amine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1AML "Create component" 2024-04-11 RCSB A1AML "Initial release" 2024-05-15 RCSB #