data_A1AMQ # _chem_comp.id A1AMQ _chem_comp.name "4-{[(S)-cyclopropyl(1,1-dioxo-1,2,3,4-tetrahydro-1lambda~6~-benzothiopyran-7-yl)methyl]amino}-N-ethyl-7H-pyrrolo[2,3-d]pyrimidine-6-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C22 H25 N5 O3 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-04-15 _chem_comp.pdbx_modified_date 2024-05-10 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 439.531 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1AMQ _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7H0L _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1AMQ N1 N1 N 0 1 N N N N N N -9.940 -8.662 18.123 0.375 -0.740 0.408 N1 A1AMQ 1 A1AMQ N3 N2 N 0 1 Y N N N N N -12.434 -5.782 19.810 3.522 -2.698 -1.342 N3 A1AMQ 2 A1AMQ C4 C1 C 0 1 Y N N N N N -13.016 -9.161 18.775 3.234 0.463 0.184 C4 A1AMQ 3 A1AMQ C5 C2 C 0 1 Y N N N N N -12.153 -8.024 18.885 2.712 -0.776 -0.242 C5 A1AMQ 4 A1AMQ C6 C3 C 0 1 Y N N N N N -10.786 -7.719 18.628 1.444 -1.387 -0.178 C6 A1AMQ 5 A1AMQ C7 C4 C 0 1 N N S N N N -8.579 -8.429 17.654 -0.935 -1.392 0.464 C7 A1AMQ 6 A1AMQ C8 C5 C 0 1 Y N N N N N -8.490 -8.286 16.148 -2.014 -0.344 0.563 C8 A1AMQ 7 A1AMQ C10 C6 C 0 1 Y N N N N N -7.774 -7.052 14.213 -2.826 1.720 1.449 C10 A1AMQ 8 A1AMQ C13 C7 C 0 1 Y N N N N N -8.951 -9.288 15.301 -3.195 -0.493 -0.135 C13 A1AMQ 9 A1AMQ C15 C8 C 0 1 N N N N N N -8.959 -8.656 11.008 -6.040 2.772 -0.195 C15 A1AMQ 10 A1AMQ C17 C9 C 0 1 N N N N N N -7.624 -9.516 18.177 -0.998 -2.306 1.690 C17 A1AMQ 11 A1AMQ C20 C10 C 0 1 Y N N N N N -11.144 -5.618 19.488 2.320 -3.228 -1.259 C20 A1AMQ 12 A1AMQ C21 C11 C 0 1 Y N N N N N -12.898 -7.001 19.495 3.767 -1.485 -0.853 C21 A1AMQ 13 A1AMQ O2 O1 O 0 1 N N N N N N -9.172 -11.674 13.470 -5.272 0.564 -2.332 O2 A1AMQ 14 A1AMQ S S1 S 0 1 N N N N N N -9.597 -10.392 12.974 -5.656 0.224 -1.008 S A1AMQ 15 A1AMQ O1 O2 O 0 1 N N N N N N -11.008 -10.126 12.927 -6.078 -1.093 -0.680 O1 A1AMQ 16 A1AMQ C14 C12 C 0 1 N N N N N N -8.926 -10.135 11.373 -6.815 1.455 -0.341 C14 A1AMQ 17 A1AMQ C16 C13 C 0 1 N N N N N N -7.967 -7.895 11.863 -5.052 2.647 0.949 C16 A1AMQ 18 A1AMQ C11 C14 C 0 1 Y N N N N N -8.222 -8.041 13.342 -4.023 1.574 0.749 C11 A1AMQ 19 A1AMQ C9 C15 C 0 1 Y N N N N N -7.908 -7.169 15.582 -1.831 0.772 1.358 C9 A1AMQ 20 A1AMQ C12 C16 C 0 1 Y N N N N N -8.839 -9.155 13.922 -4.193 0.467 -0.050 C12 A1AMQ 21 A1AMQ C19 C17 C 0 1 N N N N N N -7.061 -9.453 19.563 0.155 -2.223 2.692 C19 A1AMQ 22 A1AMQ C18 C18 C 0 1 N N N N N N -6.183 -9.172 18.392 0.023 -3.441 1.777 C18 A1AMQ 23 A1AMQ N2 N3 N 0 1 Y N N N N N -10.298 -6.494 18.930 1.302 -2.603 -0.697 N2 A1AMQ 24 A1AMQ N4 N4 N 0 1 Y N N N N N -14.154 -7.489 19.767 4.879 -0.693 -0.792 N4 A1AMQ 25 A1AMQ C3 C19 C 0 1 Y N N N N N -14.221 -8.804 19.334 4.550 0.493 -0.159 C3 A1AMQ 26 A1AMQ C2 C20 C 0 1 N N N N N N -15.427 -9.639 19.569 5.473 1.606 0.101 C2 A1AMQ 27 A1AMQ O O3 O 0 1 N N N N N N -15.459 -10.813 19.192 5.076 2.606 0.667 O A1AMQ 28 A1AMQ N N5 N 0 1 N N N N N N -16.449 -9.056 20.200 6.761 1.518 -0.289 N A1AMQ 29 A1AMQ C1 C21 C 0 1 N N N N N N -17.700 -9.761 20.498 7.682 2.627 -0.030 C1 A1AMQ 30 A1AMQ C C22 C 0 1 N N N N N N -17.607 -10.549 21.780 9.070 2.274 -0.568 C A1AMQ 31 A1AMQ H9 H1 H 0 1 N N N N N N -9.855 -9.351 18.843 0.493 0.146 0.786 H9 A1AMQ 32 A1AMQ H8 H2 H 0 1 N N N N N N -12.768 -10.117 18.337 2.688 1.245 0.690 H8 A1AMQ 33 A1AMQ H H3 H 0 1 N N N N N N -8.238 -7.477 18.086 -1.085 -1.984 -0.439 H A1AMQ 34 A1AMQ H11 H4 H 0 1 N N N N N N -7.308 -6.167 13.806 -2.675 2.592 2.068 H11 A1AMQ 35 A1AMQ H12 H5 H 0 1 N N N N N N -9.400 -10.177 15.718 -3.343 -1.366 -0.754 H12 A1AMQ 36 A1AMQ H16 H6 H 0 1 N N N N N N -8.695 -8.536 9.947 -5.498 2.981 -1.118 H16 A1AMQ 37 A1AMQ H15 H7 H 0 1 N N N N N N -9.970 -8.259 11.181 -6.736 3.585 0.011 H15 A1AMQ 38 A1AMQ H19 H8 H 0 1 N N N N N N -7.818 -10.527 17.789 -1.996 -2.495 2.085 H19 A1AMQ 39 A1AMQ H24 H9 H 0 1 N N N N N N -10.729 -4.646 19.709 2.160 -4.214 -1.668 H24 A1AMQ 40 A1AMQ H14 H10 H 0 1 N N N N N N -7.884 -10.488 11.357 -7.183 1.130 0.632 H14 A1AMQ 41 A1AMQ H13 H11 H 0 1 N N N N N N -9.517 -10.702 10.638 -7.650 1.590 -1.029 H13 A1AMQ 42 A1AMQ H17 H12 H 0 1 N N N N N N -6.957 -8.270 11.644 -4.544 3.602 1.076 H17 A1AMQ 43 A1AMQ H18 H13 H 0 1 N N N N N N -8.027 -6.828 11.602 -5.604 2.422 1.862 H18 A1AMQ 44 A1AMQ H10 H14 H 0 1 N N N N N N -7.552 -6.374 16.221 -0.910 0.900 1.907 H10 A1AMQ 45 A1AMQ H22 H15 H 0 1 N N N N N N -6.924 -10.377 20.143 0.958 -1.517 2.479 H22 A1AMQ 46 A1AMQ H23 H16 H 0 1 N N N N N N -7.354 -8.636 20.239 -0.085 -2.357 3.747 H23 A1AMQ 47 A1AMQ H20 H17 H 0 1 N N N N N N -5.399 -9.889 18.109 -0.303 -4.378 2.230 H20 A1AMQ 48 A1AMQ H21 H18 H 0 1 N N N N N N -5.829 -8.148 18.204 0.740 -3.538 0.961 H21 A1AMQ 49 A1AMQ H1 H19 H 0 1 N N N N N N -14.896 -6.980 20.204 5.756 -0.925 -1.135 H1 A1AMQ 50 A1AMQ H7 H20 H 0 1 N N N N N N -16.358 -8.101 20.481 7.078 0.720 -0.740 H7 A1AMQ 51 A1AMQ H6 H21 H 0 1 N N N N N N -17.925 -10.451 19.672 7.317 3.526 -0.528 H6 A1AMQ 52 A1AMQ H5 H22 H 0 1 N N N N N N -18.511 -9.023 20.591 7.743 2.806 1.043 H5 A1AMQ 53 A1AMQ H3 H23 H 0 1 N N N N N N -18.563 -11.061 21.966 9.435 1.375 -0.071 H3 A1AMQ 54 A1AMQ H2 H24 H 0 1 N N N N N N -16.802 -11.294 21.695 9.009 2.095 -1.642 H2 A1AMQ 55 A1AMQ H4 H25 H 0 1 N N N N N N -17.388 -9.867 22.615 9.755 3.100 -0.376 H4 A1AMQ 56 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1AMQ C C1 SING N N 1 A1AMQ C1 N SING N N 2 A1AMQ N C2 SING N N 3 A1AMQ O C2 DOUB N N 4 A1AMQ C2 C3 SING N N 5 A1AMQ C3 C4 DOUB Y N 6 A1AMQ C4 C5 SING Y N 7 A1AMQ C5 C6 DOUB Y N 8 A1AMQ C6 N1 SING N N 9 A1AMQ N1 C7 SING N N 10 A1AMQ C7 C8 SING N N 11 A1AMQ C8 C9 DOUB Y N 12 A1AMQ C9 C10 SING Y N 13 A1AMQ C10 C11 DOUB Y N 14 A1AMQ C11 C12 SING Y N 15 A1AMQ C13 C12 DOUB Y N 16 A1AMQ C8 C13 SING Y N 17 A1AMQ C12 S SING N N 18 A1AMQ O1 S DOUB N N 19 A1AMQ S O2 DOUB N N 20 A1AMQ C14 S SING N N 21 A1AMQ C15 C14 SING N N 22 A1AMQ C16 C15 SING N N 23 A1AMQ C11 C16 SING N N 24 A1AMQ C17 C7 SING N N 25 A1AMQ C17 C18 SING N N 26 A1AMQ C18 C19 SING N N 27 A1AMQ C19 C17 SING N N 28 A1AMQ N2 C6 SING Y N 29 A1AMQ C20 N2 DOUB Y N 30 A1AMQ N3 C20 SING Y N 31 A1AMQ C21 N3 DOUB Y N 32 A1AMQ C5 C21 SING Y N 33 A1AMQ N4 C21 SING Y N 34 A1AMQ C3 N4 SING Y N 35 A1AMQ N1 H9 SING N N 36 A1AMQ C4 H8 SING N N 37 A1AMQ C7 H SING N N 38 A1AMQ C10 H11 SING N N 39 A1AMQ C13 H12 SING N N 40 A1AMQ C15 H16 SING N N 41 A1AMQ C15 H15 SING N N 42 A1AMQ C17 H19 SING N N 43 A1AMQ C20 H24 SING N N 44 A1AMQ C14 H14 SING N N 45 A1AMQ C14 H13 SING N N 46 A1AMQ C16 H17 SING N N 47 A1AMQ C16 H18 SING N N 48 A1AMQ C9 H10 SING N N 49 A1AMQ C19 H22 SING N N 50 A1AMQ C19 H23 SING N N 51 A1AMQ C18 H20 SING N N 52 A1AMQ C18 H21 SING N N 53 A1AMQ N4 H1 SING N N 54 A1AMQ N H7 SING N N 55 A1AMQ C1 H6 SING N N 56 A1AMQ C1 H5 SING N N 57 A1AMQ C H3 SING N N 58 A1AMQ C H2 SING N N 59 A1AMQ C H4 SING N N 60 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1AMQ SMILES ACDLabs 12.01 "CCNC(=O)c1cc2c([NH]1)ncnc2NC(c1ccc2CCCS(=O)(=O)c2c1)C1CC1" A1AMQ InChI InChI 1.06 "InChI=1S/C22H25N5O3S/c1-2-23-22(28)17-11-16-20(26-17)24-12-25-21(16)27-19(14-6-7-14)15-8-5-13-4-3-9-31(29,30)18(13)10-15/h5,8,10-12,14,19H,2-4,6-7,9H2,1H3,(H,23,28)(H2,24,25,26,27)/t19-/m0/s1" A1AMQ InChIKey InChI 1.06 KIBMZTJZRSOFFA-IBGZPJMESA-N A1AMQ SMILES_CANONICAL CACTVS 3.385 "CCNC(=O)c1[nH]c2ncnc(N[C@@H](C3CC3)c4ccc5CCC[S](=O)(=O)c5c4)c2c1" A1AMQ SMILES CACTVS 3.385 "CCNC(=O)c1[nH]c2ncnc(N[CH](C3CC3)c4ccc5CCC[S](=O)(=O)c5c4)c2c1" A1AMQ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCNC(=O)c1cc2c([nH]1)ncnc2N[C@H](c3ccc4c(c3)S(=O)(=O)CCC4)C5CC5" A1AMQ SMILES "OpenEye OEToolkits" 2.0.7 "CCNC(=O)c1cc2c([nH]1)ncnc2NC(c3ccc4c(c3)S(=O)(=O)CCC4)C5CC5" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1AMQ "SYSTEMATIC NAME" ACDLabs 12.01 "4-{[(S)-cyclopropyl(1,1-dioxo-1,2,3,4-tetrahydro-1lambda~6~-benzothiopyran-7-yl)methyl]amino}-N-ethyl-7H-pyrrolo[2,3-d]pyrimidine-6-carboxamide" A1AMQ "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "4-[[(~{S})-[1,1-bis(oxidanylidene)-3,4-dihydro-2~{H}-thiochromen-7-yl]-cyclopropyl-methyl]amino]-~{N}-ethyl-7~{H}-pyrrolo[2,3-d]pyrimidine-6-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1AMQ "Create component" 2024-04-15 RCSB A1AMQ "Initial release" 2024-05-15 RCSB #