data_A1AMS # _chem_comp.id A1AMS _chem_comp.name "7-[(1R)-1-({(6M)-6-[(4R)-imidazo[1,5-a]pyridin-6-yl]-7H-pyrrolo[2,3-d]pyrimidin-4-yl}amino)-2-methylpropyl]-3,4-dihydro-1lambda~6~-benzothiopyran-1,1(2H)-dione" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C26 H26 N6 O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-04-15 _chem_comp.pdbx_modified_date 2024-05-10 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 486.589 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1AMS _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7H0N _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1AMS N1 N1 N 0 1 Y N N N N N 9.027 -7.047 19.000 0.130 -3.119 -0.731 N1 A1AMS 1 A1AMS N3 N2 N 0 1 Y N N N N N 5.157 -8.131 19.644 4.003 -1.909 -0.780 N3 A1AMS 2 A1AMS C4 C1 C 0 1 Y N N N N N 8.594 -8.299 18.731 0.496 -1.961 -0.189 C4 A1AMS 3 A1AMS C5 C2 C 0 1 Y N N N N N 8.120 -6.176 19.462 1.016 -3.913 -1.303 C5 A1AMS 4 A1AMS C6 C3 C 0 1 Y N N N N N 6.413 -7.616 19.415 2.761 -2.480 -0.860 C6 A1AMS 5 A1AMS C7 C4 C 0 1 Y N N N N N 5.147 -9.465 19.257 3.921 -0.696 -0.131 C7 A1AMS 6 A1AMS C8 C5 C 0 1 Y N N N N N 3.960 -10.332 19.380 5.062 0.206 0.140 C8 A1AMS 7 A1AMS C10 C6 C 0 1 Y N N N N N 2.906 -12.411 18.712 6.527 1.302 1.741 C10 A1AMS 8 A1AMS C13 C7 C 0 1 Y N N N N N 0.565 -10.753 20.808 7.604 2.334 -1.470 C13 A1AMS 9 A1AMS C15 C8 C 0 1 Y N N N N N 6.384 -9.799 18.753 2.633 -0.458 0.222 C15 A1AMS 10 A1AMS C17 C9 C 0 1 Y N N N N N 10.953 -8.788 16.374 -2.709 -0.296 0.565 C17 A1AMS 11 A1AMS C20 C10 C 0 1 Y N N N N N 11.057 -8.381 13.569 -4.323 1.962 0.777 C20 A1AMS 12 A1AMS C21 C11 C 0 1 Y N N N N N 10.482 -9.537 14.127 -4.695 0.918 -0.038 C21 A1AMS 13 A1AMS C22 C12 C 0 1 Y N N N N N 10.433 -9.736 15.500 -3.893 -0.210 -0.139 C22 A1AMS 14 A1AMS C24 C13 C 0 1 N N N N N N 10.164 -8.938 11.247 -6.071 3.530 -0.166 C24 A1AMS 15 A1AMS O1 O1 O 0 1 N N N N N N 10.197 -12.066 13.598 -5.753 1.224 -2.312 O1 A1AMS 16 A1AMS S S1 S 0 1 N N N N N N 9.707 -10.784 13.169 -6.185 0.958 -0.985 S A1AMS 17 A1AMS O O2 O 0 1 N N N N N N 8.287 -10.566 13.211 -6.845 -0.256 -0.656 O A1AMS 18 A1AMS C23 C14 C 0 1 N N N N N N 10.280 -10.430 11.546 -7.085 2.384 -0.307 C23 A1AMS 19 A1AMS C25 C15 C 0 1 N N N N N N 11.191 -8.152 12.082 -5.123 3.215 0.978 C25 A1AMS 20 A1AMS C19 C16 C 0 1 Y N N N N N 11.553 -7.435 14.468 -3.124 1.871 1.481 C19 A1AMS 21 A1AMS C18 C17 C 0 1 Y N N N N N 11.508 -7.635 15.840 -2.324 0.754 1.377 C18 A1AMS 22 A1AMS C3 C18 C 0 1 N N S N N N 10.858 -8.976 17.878 -1.847 -1.527 0.453 C3 A1AMS 23 A1AMS C1 C19 C 0 1 N N N N N N 11.819 -10.071 18.400 -2.087 -2.430 1.665 C1 A1AMS 24 A1AMS C2 C20 C 0 1 N N N N N N 13.251 -9.828 17.928 -3.560 -2.841 1.709 C2 A1AMS 25 A1AMS C C21 C 0 1 N N N N N N 11.777 -10.163 19.940 -1.212 -3.679 1.552 C A1AMS 26 A1AMS N N3 N 0 1 N N N N N N 9.502 -9.240 18.346 -0.436 -1.133 0.410 N A1AMS 27 A1AMS C16 C22 C 0 1 Y N N N N N 7.217 -8.635 18.884 1.853 -1.601 -0.239 C16 A1AMS 28 A1AMS N2 N4 N 0 1 Y N N N N N 6.823 -6.380 19.722 2.296 -3.617 -1.374 N2 A1AMS 29 A1AMS C14 C23 C 0 1 Y N N N N N 2.838 -9.986 20.077 5.727 0.795 -0.891 C14 A1AMS 30 A1AMS N5 N5 N 0 1 Y N N N N N 1.755 -10.856 20.152 6.783 1.631 -0.648 N5 A1AMS 31 A1AMS N4 N6 N 0 1 Y N N N N N -0.203 -11.805 20.606 8.473 2.996 -0.748 N4 A1AMS 32 A1AMS C12 C24 C 0 1 Y N N N N N 0.526 -12.638 19.786 8.265 2.754 0.547 C12 A1AMS 33 A1AMS C11 C25 C 0 1 Y N N N N N 1.756 -12.082 19.482 7.191 1.892 0.644 C11 A1AMS 34 A1AMS C9 C26 C 0 1 Y N N N N N 3.972 -11.577 18.675 5.476 0.475 1.517 C9 A1AMS 35 A1AMS H1 H1 H 0 1 N N N N N N 4.381 -7.628 20.025 4.819 -2.300 -1.129 H1 A1AMS 36 A1AMS H10 H2 H 0 1 N N N N N N 8.484 -5.177 19.650 0.676 -4.845 -1.731 H10 A1AMS 37 A1AMS H12 H3 H 0 1 N N N N N N 2.929 -13.334 18.152 6.855 1.506 2.749 H12 A1AMS 38 A1AMS H14 H4 H 0 1 N N N N N N 0.284 -9.909 21.421 7.549 2.345 -2.548 H14 A1AMS 39 A1AMS H16 H5 H 0 1 N N N N N N 6.673 -10.753 18.338 2.257 0.410 0.743 H16 A1AMS 40 A1AMS H19 H6 H 0 1 N N N N N N 9.986 -10.637 15.894 -4.198 -1.028 -0.775 H19 A1AMS 41 A1AMS H23 H7 H 0 1 N N N N N N 10.355 -8.765 10.178 -5.505 3.631 -1.091 H23 A1AMS 42 A1AMS H22 H8 H 0 1 N N N N N N 9.150 -8.594 11.499 -6.599 4.460 0.042 H22 A1AMS 43 A1AMS H20 H9 H 0 1 N N N N N N 11.333 -10.735 11.460 -7.500 2.132 0.669 H20 A1AMS 44 A1AMS H21 H10 H 0 1 N N N N N N 9.676 -10.992 10.819 -7.885 2.677 -0.987 H21 A1AMS 45 A1AMS H24 H11 H 0 1 N N N N N N 12.201 -8.459 11.772 -5.705 3.113 1.894 H24 A1AMS 46 A1AMS H25 H12 H 0 1 N N N N N N 11.056 -7.079 11.881 -4.435 4.052 1.099 H25 A1AMS 47 A1AMS H18 H13 H 0 1 N N N N N N 11.984 -6.522 14.085 -2.816 2.688 2.117 H18 A1AMS 48 A1AMS H17 H14 H 0 1 N N N N N N 11.911 -6.882 16.501 -1.397 0.699 1.929 H17 A1AMS 49 A1AMS H H15 H 0 1 N N N N N N 11.186 -8.031 18.336 -2.101 -2.067 -0.459 H A1AMS 50 A1AMS H5 H16 H 0 1 N N N N N N 11.484 -11.037 17.994 -1.833 -1.889 2.577 H5 A1AMS 51 A1AMS H7 H17 H 0 1 N N N N N N 13.270 -9.764 16.830 -3.814 -3.382 0.798 H7 A1AMS 52 A1AMS H6 H18 H 0 1 N N N N N N 13.623 -8.886 18.356 -3.731 -3.484 2.573 H6 A1AMS 53 A1AMS H8 H19 H 0 1 N N N N N N 13.892 -10.659 18.258 -4.184 -1.951 1.790 H8 A1AMS 54 A1AMS H3 H20 H 0 1 N N N N N N 10.742 -10.338 20.269 -0.162 -3.386 1.520 H3 A1AMS 55 A1AMS H4 H21 H 0 1 N N N N N N 12.414 -10.995 20.275 -1.383 -4.322 2.415 H4 A1AMS 56 A1AMS H2 H22 H 0 1 N N N N N N 12.145 -9.222 20.374 -1.466 -4.220 0.640 H2 A1AMS 57 A1AMS H9 H23 H 0 1 N N N N N N 9.061 -9.743 17.603 -0.156 -0.291 0.802 H9 A1AMS 58 A1AMS H15 H24 H 0 1 N N N N N N 2.791 -9.029 20.574 5.421 0.600 -1.908 H15 A1AMS 59 A1AMS H13 H25 H 0 1 N N N N N N 0.183 -13.597 19.428 8.830 3.165 1.371 H13 A1AMS 60 A1AMS H11 H26 H 0 1 N N N N N N 4.845 -11.856 18.104 4.953 0.018 2.345 H11 A1AMS 61 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1AMS C C1 SING N N 1 A1AMS C2 C1 SING N N 2 A1AMS C1 C3 SING N N 3 A1AMS N C3 SING N N 4 A1AMS C4 N SING N N 5 A1AMS C4 N1 DOUB Y N 6 A1AMS N1 C5 SING Y N 7 A1AMS C5 N2 DOUB Y N 8 A1AMS N2 C6 SING Y N 9 A1AMS C6 N3 SING Y N 10 A1AMS N3 C7 SING Y N 11 A1AMS C8 C7 SING N N 12 A1AMS C8 C9 SING Y N 13 A1AMS C9 C10 DOUB Y N 14 A1AMS C10 C11 SING Y N 15 A1AMS C11 C12 DOUB Y N 16 A1AMS C12 N4 SING Y N 17 A1AMS N4 C13 DOUB Y N 18 A1AMS C13 N5 SING Y N 19 A1AMS C11 N5 SING Y N 20 A1AMS N5 C14 SING Y N 21 A1AMS C14 C8 DOUB Y N 22 A1AMS C7 C15 DOUB Y N 23 A1AMS C15 C16 SING Y N 24 A1AMS C16 C4 SING Y N 25 A1AMS C6 C16 DOUB Y N 26 A1AMS C3 C17 SING N N 27 A1AMS C17 C18 DOUB Y N 28 A1AMS C18 C19 SING Y N 29 A1AMS C19 C20 DOUB Y N 30 A1AMS C20 C21 SING Y N 31 A1AMS C22 C21 DOUB Y N 32 A1AMS C17 C22 SING Y N 33 A1AMS C21 S SING N N 34 A1AMS O S DOUB N N 35 A1AMS S O1 DOUB N N 36 A1AMS C23 S SING N N 37 A1AMS C24 C23 SING N N 38 A1AMS C25 C24 SING N N 39 A1AMS C20 C25 SING N N 40 A1AMS N3 H1 SING N N 41 A1AMS C5 H10 SING N N 42 A1AMS C10 H12 SING N N 43 A1AMS C13 H14 SING N N 44 A1AMS C15 H16 SING N N 45 A1AMS C22 H19 SING N N 46 A1AMS C24 H23 SING N N 47 A1AMS C24 H22 SING N N 48 A1AMS C23 H20 SING N N 49 A1AMS C23 H21 SING N N 50 A1AMS C25 H24 SING N N 51 A1AMS C25 H25 SING N N 52 A1AMS C19 H18 SING N N 53 A1AMS C18 H17 SING N N 54 A1AMS C3 H SING N N 55 A1AMS C1 H5 SING N N 56 A1AMS C2 H7 SING N N 57 A1AMS C2 H6 SING N N 58 A1AMS C2 H8 SING N N 59 A1AMS C H3 SING N N 60 A1AMS C H4 SING N N 61 A1AMS C H2 SING N N 62 A1AMS N H9 SING N N 63 A1AMS C14 H15 SING N N 64 A1AMS C12 H13 SING N N 65 A1AMS C9 H11 SING N N 66 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1AMS SMILES ACDLabs 12.01 "CC(C)C(Nc1ncnc2[NH]c(cc21)c1ccc2cncn2c1)c1ccc2CCCS(=O)(=O)c2c1" A1AMS InChI InChI 1.06 "InChI=1S/C26H26N6O2S/c1-16(2)24(18-6-5-17-4-3-9-35(33,34)23(17)10-18)31-26-21-11-22(30-25(21)28-14-29-26)19-7-8-20-12-27-15-32(20)13-19/h5-8,10-16,24H,3-4,9H2,1-2H3,(H2,28,29,30,31)/t24-/m0/s1" A1AMS InChIKey InChI 1.06 SFTQLUJYJDDIEI-DEOSSOPVSA-N A1AMS SMILES_CANONICAL CACTVS 3.385 "CC(C)[C@H](Nc1ncnc2[nH]c(cc12)c3ccc4cncn4c3)c5ccc6CCC[S](=O)(=O)c6c5" A1AMS SMILES CACTVS 3.385 "CC(C)[CH](Nc1ncnc2[nH]c(cc12)c3ccc4cncn4c3)c5ccc6CCC[S](=O)(=O)c6c5" A1AMS SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)[C@@H](c1ccc2c(c1)S(=O)(=O)CCC2)Nc3c4cc([nH]c4ncn3)c5ccc6cncn6c5" A1AMS SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)C(c1ccc2c(c1)S(=O)(=O)CCC2)Nc3c4cc([nH]c4ncn3)c5ccc6cncn6c5" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1AMS "SYSTEMATIC NAME" ACDLabs 12.01 "7-[(1R)-1-({(6M)-6-[(4R)-imidazo[1,5-a]pyridin-6-yl]-7H-pyrrolo[2,3-d]pyrimidin-4-yl}amino)-2-methylpropyl]-3,4-dihydro-1lambda~6~-benzothiopyran-1,1(2H)-dione" A1AMS "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-[(1~{S})-1-[1,1-bis(oxidanylidene)-3,4-dihydro-2~{H}-thiochromen-7-yl]-2-methyl-propyl]-6-imidazo[1,5-a]pyridin-6-yl-7~{H}-pyrrolo[2,3-d]pyrimidin-4-amine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1AMS "Create component" 2024-04-15 RCSB A1AMS "Initial release" 2024-05-15 RCSB #