data_A1AMW # _chem_comp.id A1AMW _chem_comp.name "7-[(1R)-2-methyl-1-{[(6M)-6-(1-methyl-2-oxo-1,2-dihydropyridin-4-yl)-7H-pyrrolo[2,3-d]pyrimidin-4-yl]amino}propyl]-3,4-dihydro-1lambda~6~-benzothiopyran-1,1(2H)-dione" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H27 N5 O3 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-04-15 _chem_comp.pdbx_modified_date 2024-05-10 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 477.579 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1AMW _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7H0R _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1AMW N1 N1 N 0 1 Y N N N N N 8.814 -8.388 15.570 0.426 -3.180 -0.714 N1 A1AMW 1 A1AMW N3 N2 N 0 1 Y N N N N N 4.971 -9.608 15.082 4.264 -1.883 -0.913 N3 A1AMW 2 A1AMW C4 C1 C 0 1 Y N N N N N 8.447 -9.119 14.492 0.775 -1.994 -0.227 C4 A1AMW 3 A1AMW C5 C2 C 0 1 Y N N N N N 7.872 -8.093 16.466 1.316 -3.976 -1.278 C5 A1AMW 4 A1AMW C6 C3 C 0 1 Y N N N N N 6.232 -9.127 15.371 3.035 -2.484 -0.938 C6 A1AMW 5 A1AMW C7 C4 C 0 1 Y N N N N N 5.030 -10.291 13.874 4.145 -0.647 -0.307 C7 A1AMW 6 A1AMW C8 C5 C 0 1 N N N N N N 3.884 -11.013 13.294 5.247 0.309 -0.091 C8 A1AMW 7 A1AMW C10 C6 C 0 1 N N N N N N 3.040 -12.205 11.395 7.323 0.872 0.955 C10 A1AMW 8 A1AMW C13 C7 C 0 1 N N N N N N 2.672 -11.152 13.916 5.247 1.545 -0.728 C13 A1AMW 9 A1AMW C15 C8 C 0 1 Y N N N N N 7.094 -9.502 14.334 2.123 -1.600 -0.327 C15 A1AMW 10 A1AMW C17 C9 C 0 1 Y N N N N N 11.226 -6.550 12.838 -2.074 0.710 1.300 C17 A1AMW 11 A1AMW C20 C10 C 0 1 Y N N N N N 10.172 -6.928 10.317 -4.478 0.762 -0.067 C20 A1AMW 12 A1AMW C21 C11 C 0 1 Y N N N N N 10.222 -7.992 11.217 -3.651 -0.350 -0.141 C21 A1AMW 13 A1AMW C22 C12 C 0 1 N N N N N N 9.827 -5.820 7.801 -6.909 2.158 -0.339 C22 A1AMW 14 A1AMW C24 C13 C 0 1 N N N N N N 10.730 -4.483 9.696 -4.942 3.085 0.871 C24 A1AMW 15 A1AMW O2 O1 O 0 1 N N N N N N 10.010 -8.382 8.184 -5.589 0.955 -2.328 O2 A1AMW 16 A1AMW S S1 S 0 1 N N N N N N 9.414 -7.215 8.790 -5.987 0.730 -0.982 S A1AMW 17 A1AMW O1 O2 O 0 1 N N N N N N 7.994 -7.252 9.050 -6.611 -0.486 -0.592 O1 A1AMW 18 A1AMW C23 C14 C 0 1 N N N N N N 9.673 -4.541 8.612 -5.921 3.333 -0.263 C23 A1AMW 19 A1AMW C19 C15 C 0 1 Y N N N N N 10.670 -5.657 10.650 -4.116 1.845 0.700 C19 A1AMW 20 A1AMW C18 C16 C 0 1 Y N N N N N 11.179 -5.501 11.934 -2.897 1.812 1.376 C18 A1AMW 21 A1AMW C16 C17 C 0 1 Y N N N N N 10.734 -7.811 12.503 -2.451 -0.381 0.540 C16 A1AMW 22 A1AMW C3 C18 C 0 1 N N S N N N 10.730 -8.951 13.511 -1.560 -1.594 0.455 C3 A1AMW 23 A1AMW C1 C19 C 0 1 N N N N N N 11.743 -10.058 13.159 -1.748 -2.453 1.707 C1 A1AMW 24 A1AMW C2 C20 C 0 1 N N N N N N 13.154 -9.509 13.013 -1.501 -1.600 2.953 C2 A1AMW 25 A1AMW C C21 C 0 1 N N N N N N 11.705 -11.205 14.215 -3.176 -3.001 1.740 C A1AMW 26 A1AMW N N3 N 0 1 N N N N N N 9.409 -9.557 13.663 -0.162 -1.167 0.361 N A1AMW 27 A1AMW N2 N4 N 0 1 Y N N N N N 6.586 -8.435 16.477 2.586 -3.652 -1.393 N2 A1AMW 28 A1AMW C14 C22 C 0 1 Y N N N N N 6.314 -10.219 13.377 2.851 -0.453 0.059 C14 A1AMW 29 A1AMW C12 C23 C 0 1 N N N N N N 1.583 -11.882 13.296 6.310 2.427 -0.498 C12 A1AMW 30 A1AMW O O3 O 0 1 N N N N N N 0.460 -12.025 13.782 6.326 3.517 -1.049 O A1AMW 31 A1AMW N4 N5 N 0 1 N N N N N N 1.850 -12.405 12.030 7.313 2.078 0.328 N4 A1AMW 32 A1AMW C11 C24 C 0 1 N N N N N N 0.851 -13.295 11.431 8.419 3.013 0.550 C11 A1AMW 33 A1AMW C9 C25 C 0 1 N N N N N N 4.051 -11.526 11.977 6.321 -0.014 0.774 C9 A1AMW 34 A1AMW H1 H1 H 0 1 N N N N N N 4.154 -9.486 15.646 5.084 -2.261 -1.266 H1 A1AMW 35 A1AMW H10 H2 H 0 1 N N N N N N 8.199 -7.491 17.301 0.989 -4.931 -1.660 H10 A1AMW 36 A1AMW H12 H3 H 0 1 N N N N N N 3.177 -12.601 10.399 8.142 0.620 1.612 H12 A1AMW 37 A1AMW H16 H4 H 0 1 N N N N N N 2.524 -10.708 14.889 4.440 1.820 -1.390 H16 A1AMW 38 A1AMW H18 H5 H 0 1 N N N N N N 11.651 -6.388 13.818 -1.133 0.700 1.830 H18 A1AMW 39 A1AMW H20 H6 H 0 1 N N N N N N 9.861 -8.965 10.916 -3.947 -1.198 -0.741 H20 A1AMW 40 A1AMW H21 H7 H 0 1 N N N N N N 10.869 -5.911 7.460 -7.730 2.406 -1.013 H21 A1AMW 41 A1AMW H22 H8 H 0 1 N N N N N N 9.158 -5.781 6.929 -7.298 1.934 0.654 H22 A1AMW 42 A1AMW H25 H9 H 0 1 N N N N N N 11.721 -4.471 9.218 -4.272 3.942 0.945 H25 A1AMW 43 A1AMW H26 H10 H 0 1 N N N N N N 10.590 -3.557 10.272 -5.502 3.005 1.802 H26 A1AMW 44 A1AMW H24 H11 H 0 1 N N N N N N 9.786 -3.672 7.947 -5.377 3.412 -1.204 H24 A1AMW 45 A1AMW H23 H12 H 0 1 N N N N N N 8.675 -4.521 9.075 -6.468 4.257 -0.078 H23 A1AMW 46 A1AMW H19 H13 H 0 1 N N N N N N 11.549 -4.532 12.236 -2.593 2.663 1.968 H19 A1AMW 47 A1AMW H H14 H 0 1 N N N N N N 11.030 -8.533 14.483 -1.822 -2.176 -0.428 H A1AMW 48 A1AMW H5 H15 H 0 1 N N N N N N 11.445 -10.489 12.192 -1.041 -3.282 1.688 H5 A1AMW 49 A1AMW H7 H16 H 0 1 N N N N N N 13.159 -8.703 12.265 -2.208 -0.771 2.972 H7 A1AMW 50 A1AMW H6 H17 H 0 1 N N N N N N 13.495 -9.113 13.981 -1.635 -2.212 3.845 H6 A1AMW 51 A1AMW H8 H18 H 0 1 N N N N N N 13.829 -10.314 12.688 -0.484 -1.209 2.930 H8 A1AMW 52 A1AMW H4 H19 H 0 1 N N N N N N 10.678 -11.587 14.305 -3.883 -2.172 1.759 H4 A1AMW 53 A1AMW H3 H20 H 0 1 N N N N N N 12.372 -12.019 13.896 -3.352 -3.609 0.852 H3 A1AMW 54 A1AMW H2 H21 H 0 1 N N N N N N 12.039 -10.818 15.189 -3.310 -3.614 2.632 H2 A1AMW 55 A1AMW H9 H22 H 0 1 N N N N N N 9.002 -9.539 12.750 0.106 -0.303 0.712 H9 A1AMW 56 A1AMW H17 H23 H 0 1 N N N N N N 6.664 -10.628 12.441 2.452 0.419 0.555 H17 A1AMW 57 A1AMW H14 H24 H 0 1 N N N N N N -0.039 -13.336 12.077 9.199 2.835 -0.190 H14 A1AMW 58 A1AMW H13 H25 H 0 1 N N N N N N 0.567 -12.913 10.439 8.054 4.036 0.455 H13 A1AMW 59 A1AMW H15 H26 H 0 1 N N N N N N 1.275 -14.305 11.327 8.825 2.863 1.550 H15 A1AMW 60 A1AMW H11 H27 H 0 1 N N N N N N 4.980 -11.373 11.447 6.340 -0.966 1.283 H11 A1AMW 61 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1AMW C C1 SING N N 1 A1AMW C2 C1 SING N N 2 A1AMW C1 C3 SING N N 3 A1AMW N C3 SING N N 4 A1AMW C4 N SING N N 5 A1AMW C4 N1 DOUB Y N 6 A1AMW N1 C5 SING Y N 7 A1AMW C5 N2 DOUB Y N 8 A1AMW N2 C6 SING Y N 9 A1AMW C6 N3 SING Y N 10 A1AMW N3 C7 SING Y N 11 A1AMW C8 C7 SING N N 12 A1AMW C8 C9 SING N N 13 A1AMW C9 C10 DOUB N N 14 A1AMW C10 N4 SING N N 15 A1AMW C11 N4 SING N N 16 A1AMW N4 C12 SING N N 17 A1AMW O C12 DOUB N N 18 A1AMW C12 C13 SING N N 19 A1AMW C13 C8 DOUB N N 20 A1AMW C7 C14 DOUB Y N 21 A1AMW C14 C15 SING Y N 22 A1AMW C15 C4 SING Y N 23 A1AMW C6 C15 DOUB Y N 24 A1AMW C3 C16 SING N N 25 A1AMW C16 C17 DOUB Y N 26 A1AMW C17 C18 SING Y N 27 A1AMW C18 C19 DOUB Y N 28 A1AMW C19 C20 SING Y N 29 A1AMW C21 C20 DOUB Y N 30 A1AMW C16 C21 SING Y N 31 A1AMW C20 S SING N N 32 A1AMW O1 S DOUB N N 33 A1AMW S O2 DOUB N N 34 A1AMW C22 S SING N N 35 A1AMW C23 C22 SING N N 36 A1AMW C24 C23 SING N N 37 A1AMW C19 C24 SING N N 38 A1AMW N3 H1 SING N N 39 A1AMW C5 H10 SING N N 40 A1AMW C10 H12 SING N N 41 A1AMW C13 H16 SING N N 42 A1AMW C17 H18 SING N N 43 A1AMW C21 H20 SING N N 44 A1AMW C22 H21 SING N N 45 A1AMW C22 H22 SING N N 46 A1AMW C24 H25 SING N N 47 A1AMW C24 H26 SING N N 48 A1AMW C23 H24 SING N N 49 A1AMW C23 H23 SING N N 50 A1AMW C18 H19 SING N N 51 A1AMW C3 H SING N N 52 A1AMW C1 H5 SING N N 53 A1AMW C2 H7 SING N N 54 A1AMW C2 H6 SING N N 55 A1AMW C2 H8 SING N N 56 A1AMW C H4 SING N N 57 A1AMW C H3 SING N N 58 A1AMW C H2 SING N N 59 A1AMW N H9 SING N N 60 A1AMW C14 H17 SING N N 61 A1AMW C11 H14 SING N N 62 A1AMW C11 H13 SING N N 63 A1AMW C11 H15 SING N N 64 A1AMW C9 H11 SING N N 65 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1AMW SMILES ACDLabs 12.01 "O=C1C=C(C=CN1C)c1cc2c([NH]1)ncnc2NC(c1ccc2CCCS(=O)(=O)c2c1)C(C)C" A1AMW InChI InChI 1.06 "InChI=1S/C25H27N5O3S/c1-15(2)23(18-7-6-16-5-4-10-34(32,33)21(16)11-18)29-25-19-13-20(28-24(19)26-14-27-25)17-8-9-30(3)22(31)12-17/h6-9,11-15,23H,4-5,10H2,1-3H3,(H2,26,27,28,29)/t23-/m1/s1" A1AMW InChIKey InChI 1.06 BRVOBKORRXYCQP-HSZRJFAPSA-N A1AMW SMILES_CANONICAL CACTVS 3.385 "CC(C)[C@H](Nc1ncnc2[nH]c(cc12)C3=CC(=O)N(C)C=C3)c4ccc5CCC[S](=O)(=O)c5c4" A1AMW SMILES CACTVS 3.385 "CC(C)[CH](Nc1ncnc2[nH]c(cc12)C3=CC(=O)N(C)C=C3)c4ccc5CCC[S](=O)(=O)c5c4" A1AMW SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)[C@@H](c1ccc2c(c1)S(=O)(=O)CCC2)Nc3c4cc([nH]c4ncn3)C5=CC(=O)N(C=C5)C" A1AMW SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)C(c1ccc2c(c1)S(=O)(=O)CCC2)Nc3c4cc([nH]c4ncn3)C5=CC(=O)N(C=C5)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1AMW "SYSTEMATIC NAME" ACDLabs 12.01 "7-[(1R)-2-methyl-1-{[(6M)-6-(1-methyl-2-oxo-1,2-dihydropyridin-4-yl)-7H-pyrrolo[2,3-d]pyrimidin-4-yl]amino}propyl]-3,4-dihydro-1lambda~6~-benzothiopyran-1,1(2H)-dione" A1AMW "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "4-[4-[[(1~{S})-1-[1,1-bis(oxidanylidene)-3,4-dihydro-2~{H}-thiochromen-7-yl]-2-methyl-propyl]amino]-7~{H}-pyrrolo[2,3-d]pyrimidin-6-yl]-1-methyl-pyridin-2-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1AMW "Create component" 2024-04-15 RCSB A1AMW "Initial release" 2024-05-15 RCSB #