data_A1AMY
#
_chem_comp.id A1AMY
_chem_comp.name "N-[(2-fluorophenyl)methyl]oxan-4-amine"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C12 H16 F N O"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2024-04-15
_chem_comp.pdbx_modified_date 2024-04-19
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 209.260
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code A1AMY
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 7H2V
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
A1AMY C4 C1 C 0 1 Y N N N N N 18.096 -5.157 29.056 -2.694 1.405 -0.573 C4 A1AMY 1
A1AMY C5 C2 C 0 1 Y N N N N N 17.341 -5.330 27.897 -1.900 0.282 -0.442 C5 A1AMY 2
A1AMY C6 C3 C 0 1 N N N N N N 17.598 -4.520 26.650 -0.470 0.311 -0.916 C6 A1AMY 3
A1AMY C7 C4 C 0 1 N N N N N N 19.031 -4.132 24.709 1.835 0.428 -0.183 C7 A1AMY 4
A1AMY C8 C5 C 0 1 N N N N N N 20.371 -4.592 24.161 2.680 1.121 0.891 C8 A1AMY 5
A1AMY C10 C6 C 0 1 N N N N N N 18.732 -2.770 22.680 3.830 -0.965 -0.738 C10 A1AMY 6
A1AMY N N1 N 0 1 N N N N N N 18.607 -5.087 25.752 0.429 0.398 0.242 N A1AMY 7
A1AMY C C7 C 0 1 Y N N N N N 16.349 -6.289 27.933 -2.418 -0.870 0.126 C A1AMY 8
A1AMY O O1 O 0 1 N N N N N N 19.991 -3.237 22.174 4.554 -0.280 0.286 O A1AMY 9
A1AMY C1 C8 C 0 1 Y N N N N N 16.101 -7.080 29.030 -3.732 -0.895 0.562 C1 A1AMY 10
A1AMY C11 C9 C 0 1 N N N N N N 18.080 -3.801 23.567 2.344 -1.004 -0.372 C11 A1AMY 11
A1AMY C2 C10 C 0 1 Y N N N N N 16.878 -6.899 30.161 -4.524 0.230 0.430 C2 A1AMY 12
A1AMY C3 C11 C 0 1 Y N N N N N 17.865 -5.938 30.178 -4.004 1.381 -0.132 C3 A1AMY 13
A1AMY C9 C12 C 0 1 N N N N N N 20.913 -3.534 23.230 4.153 1.078 0.476 C9 A1AMY 14
A1AMY F F1 F 0 1 N N N N N N 15.554 -6.419 26.844 -1.642 -1.968 0.254 F A1AMY 15
A1AMY H3 H1 H 0 1 N N N N N N 18.871 -4.405 29.080 -2.290 2.303 -1.016 H3 A1AMY 16
A1AMY H5 H2 H 0 1 N N N N N N 16.652 -4.436 26.094 -0.254 -0.600 -1.475 H5 A1AMY 17
A1AMY H4 H3 H 0 1 N N N N N N 17.934 -3.518 26.955 -0.318 1.177 -1.560 H4 A1AMY 18
A1AMY H7 H4 H 0 1 N N N N N N 19.227 -3.179 25.223 1.920 0.974 -1.122 H7 A1AMY 19
A1AMY H8 H5 H 0 1 N N N N N N 21.075 -4.747 24.992 2.361 2.158 0.993 H8 A1AMY 20
A1AMY H9 H6 H 0 1 N N N N N N 20.240 -5.535 23.610 2.555 0.605 1.842 H9 A1AMY 21
A1AMY H12 H7 H 0 1 N N N N N N 18.898 -1.851 23.261 3.957 -0.441 -1.685 H12 A1AMY 22
A1AMY H13 H8 H 0 1 N N N N N N 18.064 -2.552 21.833 4.208 -1.983 -0.832 H13 A1AMY 23
A1AMY H6 H9 H 0 1 N N N N N N 19.407 -5.349 26.292 0.207 1.200 0.813 H6 A1AMY 24
A1AMY H H11 H 0 1 N N N N N N 15.319 -7.824 29.010 -4.137 -1.792 1.005 H A1AMY 25
A1AMY H14 H12 H 0 1 N N N N N N 17.140 -3.399 23.973 2.212 -1.563 0.554 H14 A1AMY 26
A1AMY H15 H13 H 0 1 N N N N N N 17.869 -4.710 22.985 1.784 -1.487 -1.173 H15 A1AMY 27
A1AMY H1 H14 H 0 1 N N N N N N 16.710 -7.513 31.033 -5.549 0.211 0.770 H1 A1AMY 28
A1AMY H2 H15 H 0 1 N N N N N N 18.460 -5.793 31.067 -4.624 2.259 -0.235 H2 A1AMY 29
A1AMY H10 H16 H 0 1 N N N N N N 21.104 -2.616 23.805 4.285 1.629 -0.456 H10 A1AMY 30
A1AMY H11 H17 H 0 1 N N N N N N 21.855 -3.894 22.791 4.764 1.532 1.256 H11 A1AMY 31
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
A1AMY C F SING N N 1
A1AMY C C1 DOUB Y N 2
A1AMY C1 C2 SING Y N 3
A1AMY C2 C3 DOUB Y N 4
A1AMY C3 C4 SING Y N 5
A1AMY C4 C5 DOUB Y N 6
A1AMY C5 C SING Y N 7
A1AMY C6 C5 SING N N 8
A1AMY N C6 SING N N 9
A1AMY C7 N SING N N 10
A1AMY C7 C8 SING N N 11
A1AMY C8 C9 SING N N 12
A1AMY C9 O SING N N 13
A1AMY O C10 SING N N 14
A1AMY C10 C11 SING N N 15
A1AMY C11 C7 SING N N 16
A1AMY C4 H3 SING N N 17
A1AMY C6 H5 SING N N 18
A1AMY C6 H4 SING N N 19
A1AMY C7 H7 SING N N 20
A1AMY C8 H8 SING N N 21
A1AMY C8 H9 SING N N 22
A1AMY C10 H12 SING N N 23
A1AMY C10 H13 SING N N 24
A1AMY N H6 SING N N 25
A1AMY C1 H SING N N 26
A1AMY C11 H14 SING N N 27
A1AMY C11 H15 SING N N 28
A1AMY C2 H1 SING N N 29
A1AMY C3 H2 SING N N 30
A1AMY C9 H10 SING N N 31
A1AMY C9 H11 SING N N 32
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
A1AMY SMILES ACDLabs 12.01 Fc1ccccc1CNC1CCOCC1
A1AMY InChI InChI 1.06 "InChI=1S/C12H16FNO/c13-12-4-2-1-3-10(12)9-14-11-5-7-15-8-6-11/h1-4,11,14H,5-9H2"
A1AMY InChIKey InChI 1.06 VJDVDWXYFZNXLH-UHFFFAOYSA-N
A1AMY SMILES_CANONICAL CACTVS 3.385 Fc1ccccc1CNC2CCOCC2
A1AMY SMILES CACTVS 3.385 Fc1ccccc1CNC2CCOCC2
A1AMY SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(c(c1)CNC2CCOCC2)F"
A1AMY SMILES "OpenEye OEToolkits" 2.0.7 "c1ccc(c(c1)CNC2CCOCC2)F"
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
A1AMY "SYSTEMATIC NAME" ACDLabs 12.01 "N-[(2-fluorophenyl)methyl]oxan-4-amine"
A1AMY "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-[(2-fluorophenyl)methyl]oxan-4-amine"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
A1AMY "Create component" 2024-04-15 RCSB
A1AMY "Initial release" 2024-04-24 RCSB
#