data_A1AO6 # _chem_comp.id A1AO6 _chem_comp.name "1-[(7-fluoronaphthalen-1-yl)methyl]-3-{[(methoxycarbonyl)(methyl)amino]methyl}-1H-indole-2-carboxylic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H21 F N2 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-04-19 _chem_comp.pdbx_modified_date 2025-02-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 420.433 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1AO6 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7H6H _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1AO6 N1 N1 N 0 1 Y N N N N N 29.341 3.217 22.743 -0.130 0.314 0.537 N1 A1AO6 1 A1AO6 C4 C1 C 0 1 Y N N N N N 29.822 2.139 23.475 0.083 -0.969 0.092 C4 A1AO6 2 A1AO6 C5 C2 C 0 1 Y N N N N N 29.591 2.395 24.835 1.306 -0.975 -0.607 C5 A1AO6 3 A1AO6 C6 C3 C 0 1 N N N N N N 29.419 3.338 21.280 -1.286 0.766 1.317 C6 A1AO6 4 A1AO6 C7 C4 C 0 1 N N N N N N 28.502 4.341 26.197 3.103 0.823 -1.179 C7 A1AO6 5 A1AO6 C8 C5 C 0 1 N N N N N N 27.111 3.210 27.848 4.901 -0.462 -0.153 C8 A1AO6 6 A1AO6 C17 C6 C 0 1 Y N N N N N 32.198 5.183 17.548 -5.661 -0.109 -0.855 C17 A1AO6 7 A1AO6 C21 C7 C 0 1 Y N N N N N 31.182 4.948 16.667 -5.734 -1.286 -0.177 C21 A1AO6 8 A1AO6 C24 C8 C 0 1 Y N N N N N 29.991 1.452 25.779 1.774 -2.168 -1.174 C24 A1AO6 9 A1AO6 C26 C9 C 0 1 N N N N N N 26.076 4.040 25.768 4.503 1.784 0.706 C26 A1AO6 10 A1AO6 C28 C10 C 0 1 Y N N N N N 33.094 5.113 19.859 -4.436 1.951 -1.363 C28 A1AO6 11 A1AO6 C2 C11 C 0 1 Y N N N N N 28.959 3.677 24.919 1.813 0.345 -0.564 C2 A1AO6 12 A1AO6 C3 C12 C 0 1 Y N N N N N 28.836 4.146 23.638 0.927 1.106 0.133 C3 A1AO6 13 A1AO6 C9 C13 C 0 1 N N N N N N 28.234 5.434 23.214 1.072 2.541 0.412 C9 A1AO6 14 A1AO6 N10 N2 N 0 1 N N N N N N 27.215 3.834 26.653 4.190 0.682 -0.207 N10 A1AO6 15 A1AO6 C11 C14 C 0 1 Y N N N N N 30.699 3.965 20.771 -2.396 1.169 0.381 C11 A1AO6 16 A1AO6 C12 C15 C 0 1 Y N N N N N 30.843 4.277 19.377 -3.511 0.331 0.205 C12 A1AO6 17 A1AO6 O13 O1 O 0 1 N N N N N N 28.038 3.058 28.610 4.641 -1.375 -0.910 O13 A1AO6 18 A1AO6 C14 C16 C 0 1 Y N N N N N 29.804 4.050 18.432 -3.625 -0.886 0.898 C14 A1AO6 19 A1AO6 O15 O2 O 0 1 N N N N N N 28.499 6.499 23.788 1.990 3.167 -0.081 O15 A1AO6 20 A1AO6 C16 C17 C 0 1 Y N N N N N 32.060 4.867 18.923 -4.545 0.728 -0.679 C16 A1AO6 21 A1AO6 C18 C18 C 0 1 Y N N N N N 30.011 4.392 17.133 -4.718 -1.675 0.699 C18 A1AO6 22 A1AO6 O19 O3 O 0 1 N N N N N N 25.857 2.771 28.071 5.900 -0.591 0.740 O19 A1AO6 23 A1AO6 O20 O4 O 0 1 N N N N N N 27.410 5.311 22.215 0.186 3.164 1.216 O20 A1AO6 24 A1AO6 F22 F1 F 0 1 N N N N N N 29.012 4.151 16.239 -4.826 -2.845 1.366 F22 A1AO6 25 A1AO6 C23 C19 C 0 1 Y N N N N N 30.430 0.966 23.045 -0.644 -2.151 0.209 C23 A1AO6 26 A1AO6 C25 C20 C 0 1 Y N N N N N 31.747 4.231 21.627 -2.325 2.346 -0.298 C25 A1AO6 27 A1AO6 C27 C21 C 0 1 Y N N N N N 32.938 4.781 21.175 -3.342 2.736 -1.167 C27 A1AO6 28 A1AO6 C29 C22 C 0 1 N N N N N N 25.644 2.109 29.346 6.623 -1.850 0.743 C29 A1AO6 29 A1AO6 C30 C23 C 0 1 Y N N N N N 30.602 0.281 25.361 1.044 -3.313 -1.046 C30 A1AO6 30 A1AO6 C31 C24 C 0 1 Y N N N N N 30.817 0.037 24.003 -0.162 -3.310 -0.357 C31 A1AO6 31 A1AO6 H32 H1 H 0 1 N N N N N N 29.334 2.331 20.847 -1.629 -0.044 1.960 H32 A1AO6 32 A1AO6 H33 H2 H 0 1 N N N N N N 28.575 3.956 20.941 -0.998 1.620 1.930 H33 A1AO6 33 A1AO6 H34 H3 H 0 1 N N N N N N 29.253 4.156 26.980 3.326 0.226 -2.063 H34 A1AO6 34 A1AO6 H35 H4 H 0 1 N N N N N N 28.414 5.423 26.022 3.004 1.870 -1.464 H35 A1AO6 35 A1AO6 H37 H5 H 0 1 N N N N N N 33.121 5.616 17.192 -6.454 0.179 -1.529 H37 A1AO6 36 A1AO6 H39 H6 H 0 1 N N N N N N 31.295 5.194 15.621 -6.590 -1.929 -0.317 H39 A1AO6 37 A1AO6 H41 H7 H 0 1 N N N N N N 29.826 1.633 26.831 2.711 -2.180 -1.712 H41 A1AO6 38 A1AO6 H44 H8 H 0 1 N N N N N N 25.172 3.613 26.227 3.917 1.677 1.619 H44 A1AO6 39 A1AO6 H45 H9 H 0 1 N N N N N N 25.930 5.118 25.604 5.565 1.762 0.951 H45 A1AO6 40 A1AO6 H43 H10 H 0 1 N N N N N N 26.266 3.545 24.804 4.260 2.732 0.228 H43 A1AO6 41 A1AO6 H47 H11 H 0 1 N N N N N N 34.016 5.568 19.529 -5.216 2.266 -2.040 H47 A1AO6 42 A1AO6 H36 H12 H 0 1 N N N N N N 28.866 3.613 18.742 -2.848 -1.196 1.582 H36 A1AO6 43 A1AO6 H38 H13 H 0 1 N N N N N N 27.046 6.161 21.997 0.351 4.097 1.411 H38 A1AO6 44 A1AO6 H40 H14 H 0 1 N N N N N N 30.597 0.781 21.994 -1.583 -2.159 0.744 H40 A1AO6 45 A1AO6 H42 H15 H 0 1 N N N N N N 31.638 4.005 22.677 -1.467 2.988 -0.161 H42 A1AO6 46 A1AO6 H46 H16 H 0 1 N N N N N N 33.748 4.948 21.869 -3.260 3.675 -1.694 H46 A1AO6 47 A1AO6 H48 H17 H 0 1 N N N N N N 24.593 1.793 29.424 7.082 -2.007 -0.234 H48 A1AO6 48 A1AO6 H50 H18 H 0 1 N N N N N N 26.298 1.228 29.415 7.399 -1.822 1.508 H50 A1AO6 49 A1AO6 H49 H19 H 0 1 N N N N N N 25.879 2.805 30.164 5.932 -2.666 0.955 H49 A1AO6 50 A1AO6 H51 H20 H 0 1 N N N N N N 30.915 -0.450 26.092 1.407 -4.231 -1.485 H51 A1AO6 51 A1AO6 H52 H21 H 0 1 N N N N N N 31.289 -0.884 23.694 -0.728 -4.225 -0.264 H52 A1AO6 52 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1AO6 N1 C4 SING Y N 1 A1AO6 N1 C3 SING Y N 2 A1AO6 N1 C6 SING N N 3 A1AO6 C2 C3 DOUB Y N 4 A1AO6 C2 C5 SING Y N 5 A1AO6 C2 C7 SING N N 6 A1AO6 C3 C9 SING N N 7 A1AO6 C4 C5 DOUB Y N 8 A1AO6 C4 C23 SING Y N 9 A1AO6 C5 C24 SING Y N 10 A1AO6 C6 C11 SING N N 11 A1AO6 C7 N10 SING N N 12 A1AO6 C8 N10 SING N N 13 A1AO6 C8 O19 SING N N 14 A1AO6 C8 O13 DOUB N N 15 A1AO6 C9 O20 SING N N 16 A1AO6 C9 O15 DOUB N N 17 A1AO6 N10 C26 SING N N 18 A1AO6 C11 C25 DOUB Y N 19 A1AO6 C11 C12 SING Y N 20 A1AO6 C12 C16 DOUB Y N 21 A1AO6 C12 C14 SING Y N 22 A1AO6 C14 C18 DOUB Y N 23 A1AO6 C16 C28 SING Y N 24 A1AO6 C16 C17 SING Y N 25 A1AO6 C17 C21 DOUB Y N 26 A1AO6 C18 C21 SING Y N 27 A1AO6 C18 F22 SING N N 28 A1AO6 O19 C29 SING N N 29 A1AO6 C23 C31 DOUB Y N 30 A1AO6 C24 C30 DOUB Y N 31 A1AO6 C25 C27 SING Y N 32 A1AO6 C27 C28 DOUB Y N 33 A1AO6 C30 C31 SING Y N 34 A1AO6 C6 H32 SING N N 35 A1AO6 C6 H33 SING N N 36 A1AO6 C7 H34 SING N N 37 A1AO6 C7 H35 SING N N 38 A1AO6 C17 H37 SING N N 39 A1AO6 C21 H39 SING N N 40 A1AO6 C24 H41 SING N N 41 A1AO6 C26 H44 SING N N 42 A1AO6 C26 H45 SING N N 43 A1AO6 C26 H43 SING N N 44 A1AO6 C28 H47 SING N N 45 A1AO6 C14 H36 SING N N 46 A1AO6 O20 H38 SING N N 47 A1AO6 C23 H40 SING N N 48 A1AO6 C25 H42 SING N N 49 A1AO6 C27 H46 SING N N 50 A1AO6 C29 H48 SING N N 51 A1AO6 C29 H50 SING N N 52 A1AO6 C29 H49 SING N N 53 A1AO6 C30 H51 SING N N 54 A1AO6 C31 H52 SING N N 55 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1AO6 SMILES ACDLabs 12.01 "O=C(OC)N(C)Cc1c2ccccc2n(Cc2cccc3ccc(F)cc32)c1C(=O)O" A1AO6 InChI InChI 1.06 "InChI=1S/C24H21FN2O4/c1-26(24(30)31-2)14-20-18-8-3-4-9-21(18)27(22(20)23(28)29)13-16-7-5-6-15-10-11-17(25)12-19(15)16/h3-12H,13-14H2,1-2H3,(H,28,29)" A1AO6 InChIKey InChI 1.06 YLUUQYXBGGRPTJ-UHFFFAOYSA-N A1AO6 SMILES_CANONICAL CACTVS 3.385 "COC(=O)N(C)Cc1c2ccccc2n(Cc3cccc4ccc(F)cc34)c1C(O)=O" A1AO6 SMILES CACTVS 3.385 "COC(=O)N(C)Cc1c2ccccc2n(Cc3cccc4ccc(F)cc34)c1C(O)=O" A1AO6 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN(Cc1c2ccccc2n(c1C(=O)O)Cc3cccc4c3cc(cc4)F)C(=O)OC" A1AO6 SMILES "OpenEye OEToolkits" 2.0.7 "CN(Cc1c2ccccc2n(c1C(=O)O)Cc3cccc4c3cc(cc4)F)C(=O)OC" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1AO6 "SYSTEMATIC NAME" ACDLabs 12.01 "1-[(7-fluoronaphthalen-1-yl)methyl]-3-{[(methoxycarbonyl)(methyl)amino]methyl}-1H-indole-2-carboxylic acid" A1AO6 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "1-[(7-fluoranylnaphthalen-1-yl)methyl]-3-[[methoxycarbonyl(methyl)amino]methyl]indole-2-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1AO6 "Create component" 2024-04-19 RCSB A1AO6 "Initial release" 2025-03-05 RCSB #