data_A1AO8 # _chem_comp.id A1AO8 _chem_comp.name "3-[2-(dimethylamino)-2-oxoethyl]-5-fluoro-1-[(naphthalen-1-yl)methyl]-1H-indole-2-carboxylic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C24 H21 F N2 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-04-19 _chem_comp.pdbx_modified_date 2025-02-28 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 404.434 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1AO8 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7H6A _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1AO8 N1 N1 N 0 1 Y N N N N N -26.695 20.493 6.291 -0.231 -0.262 -0.711 N1 A1AO8 1 A1AO8 C4 C1 C 0 1 Y N N N N N -27.052 20.114 8.487 1.152 1.238 0.221 C4 A1AO8 2 A1AO8 C5 C2 C 0 1 Y N N N N N -26.068 20.369 7.523 -0.085 1.077 -0.432 C5 A1AO8 3 A1AO8 C6 C3 C 0 1 N N N N N N -26.009 20.854 5.062 -1.379 -0.872 -1.388 C6 A1AO8 4 A1AO8 C7 C4 C 0 1 N N N N N N -29.667 19.883 8.437 3.072 -0.369 0.942 C7 A1AO8 5 A1AO8 C8 C5 C 0 1 N N N N N N -29.749 18.540 9.122 4.152 -0.278 -0.106 C8 A1AO8 6 A1AO8 C10 C6 C 0 1 Y N N N N N -25.955 22.350 4.829 -2.436 -1.216 -0.371 C10 A1AO8 7 A1AO8 C13 C7 C 0 1 Y N N N N N -25.380 22.878 3.634 -3.598 -0.432 -0.267 C13 A1AO8 8 A1AO8 C17 C8 C 0 1 Y N N N N N -25.318 19.964 10.116 0.760 3.595 0.384 C17 A1AO8 9 A1AO8 C20 C9 C 0 1 Y N N N N N -24.330 20.217 9.168 -0.462 3.437 -0.262 C20 A1AO8 10 A1AO8 C22 C10 C 0 1 Y N N N N N -26.418 23.225 5.798 -2.274 -2.291 0.448 C22 A1AO8 11 A1AO8 C24 C11 C 0 1 N N N N N N -30.047 16.128 8.926 6.484 -0.440 -0.793 C24 A1AO8 12 A1AO8 C26 C12 C 0 1 Y N N N N N -24.855 22.055 2.601 -3.803 0.682 -1.099 C26 A1AO8 13 A1AO8 C28 C13 C 0 1 Y N N N N N -24.796 24.818 2.250 -5.744 0.012 0.798 C28 A1AO8 14 A1AO8 C2 C14 C 0 1 Y N N N N N -28.317 20.103 7.801 1.739 -0.046 0.318 C2 A1AO8 15 A1AO8 C3 C15 C 0 1 Y N N N N N -28.062 20.369 6.486 0.885 -0.936 -0.254 C3 A1AO8 16 A1AO8 C9 C16 C 0 1 N N N N N N -29.035 20.424 5.400 1.113 -2.382 -0.368 C9 A1AO8 17 A1AO8 C11 C17 C 0 1 Y N N N N N -24.714 20.422 7.852 -0.885 2.191 -0.668 C11 A1AO8 18 A1AO8 C12 C18 C 0 1 Y N N N N N -26.663 19.914 9.818 1.562 2.516 0.626 C12 A1AO8 19 A1AO8 N14 N2 N 0 1 N N N N N N -29.964 17.468 8.348 5.434 -0.528 0.225 N14 A1AO8 20 A1AO8 O15 O1 O 0 1 N N N N N N -29.613 18.445 10.320 3.867 0.020 -1.246 O15 A1AO8 21 A1AO8 O16 O2 O 0 1 N N N N N N -30.102 20.982 5.522 2.084 -2.888 0.160 O16 A1AO8 22 A1AO8 C18 C19 C 0 1 Y N N N N N -25.337 24.299 3.449 -4.582 -0.772 0.695 C18 A1AO8 23 A1AO8 O19 O3 O 0 1 N N N N N N -28.730 19.710 4.355 0.244 -3.149 -1.058 O19 A1AO8 24 A1AO8 F21 F1 F 0 1 N N N N N N -24.940 19.785 11.426 1.157 4.826 0.774 F21 A1AO8 25 A1AO8 C23 C20 C 0 1 Y N N N N N -26.365 24.605 5.608 -3.241 -2.625 1.394 C23 A1AO8 26 A1AO8 C25 C21 C 0 1 N N N N N N -30.127 17.547 6.917 5.779 -0.888 1.603 C25 A1AO8 27 A1AO8 C27 C22 C 0 1 Y N N N N N -25.860 25.137 4.459 -4.377 -1.886 1.526 C27 A1AO8 28 A1AO8 C29 C23 C 0 1 Y N N N N N -24.318 22.602 1.466 -4.941 1.417 -0.970 C29 A1AO8 29 A1AO8 C30 C24 C 0 1 Y N N N N N -24.281 23.981 1.296 -5.908 1.084 -0.024 C30 A1AO8 30 A1AO8 H32 H1 H 0 1 N N N N N N -24.979 20.470 5.110 -1.788 -0.170 -2.114 H32 A1AO8 31 A1AO8 H31 H2 H 0 1 N N N N N N -26.536 20.387 4.217 -1.058 -1.779 -1.900 H31 A1AO8 32 A1AO8 H33 H3 H 0 1 N N N N N N -29.844 20.674 9.181 3.047 -1.379 1.351 H33 A1AO8 33 A1AO8 H34 H4 H 0 1 N N N N N N -30.441 19.933 7.657 3.281 0.341 1.742 H34 A1AO8 34 A1AO8 H38 H5 H 0 1 N N N N N N -23.288 20.253 9.452 -1.085 4.300 -0.446 H38 A1AO8 35 A1AO8 H39 H6 H 0 1 N N N N N N -26.827 22.831 6.717 -1.383 -2.895 0.363 H39 A1AO8 36 A1AO8 H42 H7 H 0 1 N N N N N N -30.227 15.394 8.127 6.040 -0.162 -1.749 H42 A1AO8 37 A1AO8 H41 H8 H 0 1 N N N N N N -29.102 15.890 9.437 7.213 0.315 -0.498 H41 A1AO8 38 A1AO8 H43 H9 H 0 1 N N N N N N -30.875 16.092 9.650 6.979 -1.406 -0.889 H43 A1AO8 39 A1AO8 H47 H10 H 0 1 N N N N N N -24.880 20.981 2.713 -3.062 0.953 -1.837 H47 A1AO8 40 A1AO8 H49 H11 H 0 1 N N N N N N -24.789 25.885 2.085 -6.502 -0.235 1.527 H49 A1AO8 41 A1AO8 H35 H12 H 0 1 N N N N N N -23.974 20.620 7.091 -1.836 2.079 -1.168 H35 A1AO8 42 A1AO8 H36 H13 H 0 1 N N N N N N -27.396 19.726 10.589 2.510 2.647 1.128 H36 A1AO8 43 A1AO8 H37 H14 H 0 1 N N N N N N -29.459 19.711 3.746 0.453 -4.090 -1.133 H37 A1AO8 44 A1AO8 H40 H15 H 0 1 N N N N N N -26.730 25.263 6.383 -3.088 -3.484 2.031 H40 A1AO8 45 A1AO8 H45 H16 H 0 1 N N N N N N -30.291 16.538 6.510 5.729 -1.971 1.719 H45 A1AO8 46 A1AO8 H46 H17 H 0 1 N N N N N N -30.993 18.182 6.681 6.789 -0.545 1.826 H46 A1AO8 47 A1AO8 H44 H18 H 0 1 N N N N N N -29.221 17.981 6.468 5.075 -0.416 2.288 H44 A1AO8 48 A1AO8 H48 H19 H 0 1 N N N N N N -25.860 26.208 4.320 -5.118 -2.157 2.264 H48 A1AO8 49 A1AO8 H50 H20 H 0 1 N N N N N N -23.920 21.957 0.697 -5.096 2.273 -1.611 H50 A1AO8 50 A1AO8 H51 H21 H 0 1 N N N N N N -23.841 24.397 0.402 -6.802 1.684 0.058 H51 A1AO8 51 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1AO8 N1 C6 SING N N 1 A1AO8 N1 C5 SING Y N 2 A1AO8 N1 C3 SING Y N 3 A1AO8 C2 C3 DOUB Y N 4 A1AO8 C2 C4 SING Y N 5 A1AO8 C2 C7 SING N N 6 A1AO8 C3 C9 SING N N 7 A1AO8 C4 C12 DOUB Y N 8 A1AO8 C4 C5 SING Y N 9 A1AO8 C5 C11 DOUB Y N 10 A1AO8 C6 C10 SING N N 11 A1AO8 C7 C8 SING N N 12 A1AO8 C8 N14 SING N N 13 A1AO8 C8 O15 DOUB N N 14 A1AO8 C9 O19 SING N N 15 A1AO8 C9 O16 DOUB N N 16 A1AO8 C10 C13 DOUB Y N 17 A1AO8 C10 C22 SING Y N 18 A1AO8 C11 C20 SING Y N 19 A1AO8 C12 C17 SING Y N 20 A1AO8 C13 C18 SING Y N 21 A1AO8 C13 C26 SING Y N 22 A1AO8 N14 C24 SING N N 23 A1AO8 N14 C25 SING N N 24 A1AO8 C17 C20 DOUB Y N 25 A1AO8 C17 F21 SING N N 26 A1AO8 C18 C28 SING Y N 27 A1AO8 C18 C27 DOUB Y N 28 A1AO8 C22 C23 DOUB Y N 29 A1AO8 C23 C27 SING Y N 30 A1AO8 C26 C29 DOUB Y N 31 A1AO8 C28 C30 DOUB Y N 32 A1AO8 C29 C30 SING Y N 33 A1AO8 C6 H32 SING N N 34 A1AO8 C6 H31 SING N N 35 A1AO8 C7 H33 SING N N 36 A1AO8 C7 H34 SING N N 37 A1AO8 C20 H38 SING N N 38 A1AO8 C22 H39 SING N N 39 A1AO8 C24 H42 SING N N 40 A1AO8 C24 H41 SING N N 41 A1AO8 C24 H43 SING N N 42 A1AO8 C26 H47 SING N N 43 A1AO8 C28 H49 SING N N 44 A1AO8 C11 H35 SING N N 45 A1AO8 C12 H36 SING N N 46 A1AO8 O19 H37 SING N N 47 A1AO8 C23 H40 SING N N 48 A1AO8 C25 H45 SING N N 49 A1AO8 C25 H46 SING N N 50 A1AO8 C25 H44 SING N N 51 A1AO8 C27 H48 SING N N 52 A1AO8 C29 H50 SING N N 53 A1AO8 C30 H51 SING N N 54 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1AO8 SMILES ACDLabs 12.01 "CN(C)C(=O)Cc1c2cc(F)ccc2n(Cc2cccc3ccccc32)c1C(=O)O" A1AO8 InChI InChI 1.06 "InChI=1S/C24H21FN2O3/c1-26(2)22(28)13-20-19-12-17(25)10-11-21(19)27(23(20)24(29)30)14-16-8-5-7-15-6-3-4-9-18(15)16/h3-12H,13-14H2,1-2H3,(H,29,30)" A1AO8 InChIKey InChI 1.06 SZZHBDYOLFEVKI-UHFFFAOYSA-N A1AO8 SMILES_CANONICAL CACTVS 3.385 "CN(C)C(=O)Cc1c2cc(F)ccc2n(Cc3cccc4ccccc34)c1C(O)=O" A1AO8 SMILES CACTVS 3.385 "CN(C)C(=O)Cc1c2cc(F)ccc2n(Cc3cccc4ccccc34)c1C(O)=O" A1AO8 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN(C)C(=O)Cc1c2cc(ccc2n(c1C(=O)O)Cc3cccc4c3cccc4)F" A1AO8 SMILES "OpenEye OEToolkits" 2.0.7 "CN(C)C(=O)Cc1c2cc(ccc2n(c1C(=O)O)Cc3cccc4c3cccc4)F" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1AO8 "SYSTEMATIC NAME" ACDLabs 12.01 "3-[2-(dimethylamino)-2-oxoethyl]-5-fluoro-1-[(naphthalen-1-yl)methyl]-1H-indole-2-carboxylic acid" A1AO8 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "3-[2-(dimethylamino)-2-oxidanylidene-ethyl]-5-fluoranyl-1-(naphthalen-1-ylmethyl)indole-2-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1AO8 "Create component" 2024-04-19 RCSB A1AO8 "Initial release" 2025-03-05 RCSB #