data_A1AP9 # _chem_comp.id A1AP9 _chem_comp.name "(5S)-1,3,7-triazaspiro[4.5]decane-2,4-dione" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C7 H11 N3 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-04-29 _chem_comp.pdbx_modified_date 2024-05-24 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 169.181 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1AP9 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 7H7M _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1AP9 N1 N1 N 0 1 N N N N N N 4.222 24.700 -20.946 2.104 0.531 1.198 N1 A1AP9 1 A1AP9 C4 C1 C 0 1 N N N N N N 6.514 24.871 -21.851 2.138 0.556 -1.253 C4 A1AP9 2 A1AP9 C5 C2 C 0 1 N N N N N N 5.104 24.365 -22.076 2.955 0.320 0.020 C5 A1AP9 3 A1AP9 C6 C3 C 0 1 N N N N N N 4.139 26.145 -20.767 0.989 -0.426 1.225 C6 A1AP9 4 A1AP9 N N2 N 0 1 N N N N N N 5.967 28.161 -18.619 -2.145 -0.436 0.010 N A1AP9 5 A1AP9 C C4 C 0 1 N N N N N N 6.256 26.915 -18.092 -1.841 0.868 0.009 C A1AP9 6 A1AP9 O O1 O 0 1 N N N N N N 6.714 26.703 -16.966 -2.671 1.755 0.021 O A1AP9 7 A1AP9 C1 C5 C 0 1 N N N N N N 5.470 28.071 -19.884 -1.036 -1.205 -0.005 C1 A1AP9 8 A1AP9 C2 C6 C 0 1 N N S N N N 5.489 26.593 -20.277 0.124 -0.238 -0.017 C2 A1AP9 9 A1AP9 C3 C7 C 0 1 N N N N N N 6.476 26.339 -21.428 0.957 -0.420 -1.282 C3 A1AP9 10 A1AP9 N2 N3 N 0 1 N N N N N N 5.946 25.993 -19.029 -0.512 1.085 -0.007 N2 A1AP9 11 A1AP9 O1 O2 O 0 1 N N N N N N 5.028 28.990 -20.553 -0.983 -2.416 -0.008 O1 A1AP9 12 A1AP9 H7 H1 H 0 1 N N N N N N 3.307 24.338 -21.125 2.645 0.480 2.049 H7 A1AP9 13 A1AP9 H3 H3 H 0 1 N N N N N N 7.090 24.774 -22.783 1.765 1.580 -1.261 H3 A1AP9 14 A1AP9 H4 H4 H 0 1 N N N N N N 6.994 24.275 -21.060 2.769 0.392 -2.126 H4 A1AP9 15 A1AP9 H5 H5 H 0 1 N N N N N N 4.702 24.824 -22.991 3.793 1.016 0.048 H5 A1AP9 16 A1AP9 H6 H6 H 0 1 N N N N N N 5.132 23.272 -22.196 3.333 -0.703 0.024 H6 A1AP9 17 A1AP9 H8 H7 H 0 1 N N N N N N 3.901 26.633 -21.723 1.382 -1.442 1.243 H8 A1AP9 18 A1AP9 H9 H8 H 0 1 N N N N N N 3.365 26.392 -20.026 0.385 -0.255 2.116 H9 A1AP9 19 A1AP9 H H9 H 0 1 N N N N N N 6.106 29.023 -18.131 -3.050 -0.785 0.020 H A1AP9 20 A1AP9 H1 H10 H 0 1 N N N N N N 6.174 26.948 -22.293 0.339 -0.217 -2.157 H1 A1AP9 21 A1AP9 H2 H11 H 0 1 N N N N N N 7.483 26.639 -21.102 1.331 -1.443 -1.328 H2 A1AP9 22 A1AP9 H10 H12 H 0 1 N N N N N N 6.022 25.007 -18.883 -0.064 1.946 -0.010 H10 A1AP9 23 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1AP9 O C DOUB N N 1 A1AP9 C N SING N N 2 A1AP9 N C1 SING N N 3 A1AP9 C1 O1 DOUB N N 4 A1AP9 C2 C1 SING N N 5 A1AP9 C2 C3 SING N N 6 A1AP9 C3 C4 SING N N 7 A1AP9 C4 C5 SING N N 8 A1AP9 C5 N1 SING N N 9 A1AP9 N1 C6 SING N N 10 A1AP9 C6 C2 SING N N 11 A1AP9 N2 C2 SING N N 12 A1AP9 C N2 SING N N 13 A1AP9 N1 H7 SING N N 14 A1AP9 C4 H3 SING N N 15 A1AP9 C4 H4 SING N N 16 A1AP9 C5 H5 SING N N 17 A1AP9 C5 H6 SING N N 18 A1AP9 C6 H8 SING N N 19 A1AP9 C6 H9 SING N N 20 A1AP9 N H SING N N 21 A1AP9 C3 H1 SING N N 22 A1AP9 C3 H2 SING N N 23 A1AP9 N2 H10 SING N N 24 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1AP9 SMILES ACDLabs 12.01 "O=C1NC(=O)NC21CCCNC2" A1AP9 InChI InChI 1.06 "InChI=1S/C7H11N3O2/c11-5-7(10-6(12)9-5)2-1-3-8-4-7/h8H,1-4H2,(H2,9,10,11,12)/t7-/m0/s1" A1AP9 InChIKey InChI 1.06 PLFDWSDBRBNQLQ-ZETCQYMHSA-N A1AP9 SMILES_CANONICAL CACTVS 3.385 "O=C1NC(=O)[C@@]2(CCCNC2)N1" A1AP9 SMILES CACTVS 3.385 "O=C1NC(=O)[C]2(CCCNC2)N1" A1AP9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C1C[C@]2(CNC1)C(=O)NC(=O)N2" A1AP9 SMILES "OpenEye OEToolkits" 2.0.7 "C1CC2(CNC1)C(=O)NC(=O)N2" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1AP9 "SYSTEMATIC NAME" ACDLabs 12.01 "(5S)-1,3,7-triazaspiro[4.5]decane-2,4-dione" A1AP9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(5~{S})-1,3,9-triazaspiro[4.5]decane-2,4-dione" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1AP9 "Create component" 2024-04-29 RCSB A1AP9 "Initial release" 2024-05-29 RCSB #