data_A1APH
#
_chem_comp.id A1APH
_chem_comp.name "6-{1-[6-(3-hydroxy-3-methylbutoxy)-1,3-benzoxazol-2-yl]azetidin-3-yl}-3-[(1-methyl-1H-pyrazol-4-yl)amino]pyrazine-2-carboxamide"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C24 H28 N8 O4"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2024-04-22
_chem_comp.pdbx_modified_date 2024-10-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 492.530
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code A1APH
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 9BHK
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
_chem_comp.pdbx_pcm ?
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
A1APH N1 N1 N 0 1 Y N N N N N -37.664 -12.282 -5.099 4.904 -0.602 -0.022 N1 A1APH 1
A1APH N3 N2 N 0 1 N N N N N N -37.470 -10.435 -6.545 6.510 1.111 -0.122 N3 A1APH 2
A1APH C4 C1 C 0 1 Y N N N N N -39.093 -12.152 -3.163 2.617 -0.069 -0.095 C4 A1APH 3
A1APH C5 C2 C 0 1 N N N N N N -39.610 -12.726 -1.867 1.184 -0.534 -0.084 C5 A1APH 4
A1APH C6 C3 C 0 1 Y N N N N N -36.505 -11.014 -7.396 7.546 0.180 0.080 C6 A1APH 5
A1APH C7 C4 C 0 1 N N N N N N -39.626 -9.027 -5.019 4.459 3.073 -0.294 C7 A1APH 6
A1APH C8 C5 C 0 1 Y N N N N N -36.080 -12.295 -7.561 8.876 0.454 0.094 C8 A1APH 7
A1APH C10 C6 C 0 1 N N N N N N -34.360 -13.397 -9.019 10.985 -0.882 0.413 C10 A1APH 8
A1APH C13 C7 C 0 1 Y N N N N N -45.222 -11.137 3.301 -5.219 0.020 0.860 C13 A1APH 9
A1APH C15 C8 C 0 1 Y N N N N N -45.267 -12.796 1.532 -4.648 -1.423 -0.981 C15 A1APH 10
A1APH C17 C9 C 0 1 Y N N N N N -43.371 -11.308 1.788 -2.969 -0.780 0.629 C17 A1APH 11
A1APH C20 C10 C 0 1 N N N N N N -47.656 -12.182 4.232 -7.784 0.176 0.027 C20 A1APH 12
A1APH C21 C11 C 0 1 N N N N N N -49.116 -12.577 4.309 -9.167 0.120 -0.624 C21 A1APH 13
A1APH C22 C12 C 0 1 N N N N N N -49.400 -13.856 5.091 -10.148 0.967 0.191 C22 A1APH 14
A1APH C24 C13 C 0 1 N N N N N N -48.711 -13.846 6.448 -11.556 0.812 -0.386 C24 A1APH 15
A1APH C1 C14 C 0 1 Y N N N N N -39.066 -10.386 -4.660 4.152 1.632 -0.195 C1 A1APH 16
A1APH C11 C15 C 0 1 N N N N N N -41.112 -13.102 -1.789 0.933 -1.747 0.830 C11 A1APH 17
A1APH C12 C16 C 0 1 N N N N N N -39.884 -11.643 -0.755 0.825 -1.466 -1.255 C12 A1APH 18
A1APH C14 C17 C 0 1 Y N N N N N -45.860 -12.181 2.628 -5.584 -0.673 -0.288 C14 A1APH 19
A1APH C16 C18 C 0 1 Y N N N N N -44.026 -12.340 1.152 -3.341 -1.483 -0.527 C16 A1APH 20
A1APH C18 C19 C 0 1 Y N N N N N -43.974 -10.694 2.884 -3.921 -0.028 1.318 C18 A1APH 21
A1APH C19 C20 C 0 1 Y N N N N N -42.180 -11.913 0.147 -1.216 -1.809 -0.132 C19 A1APH 22
A1APH C2 C21 C 0 1 Y N N N N N -38.091 -11.056 -5.446 5.193 0.692 -0.111 C2 A1APH 23
A1APH C23 C22 C 0 1 N N N N N N -50.894 -14.085 5.251 -10.139 0.498 1.647 C23 A1APH 24
A1APH C3 C23 C 0 1 Y N N N N N -38.156 -12.813 -3.974 3.644 -0.998 -0.012 C3 A1APH 25
A1APH C9 C24 C 0 1 Y N N N N N -35.737 -10.263 -8.295 7.389 -1.194 0.310 C9 A1APH 26
A1APH N2 N3 N 0 1 Y N N N N N -39.543 -10.944 -3.536 2.888 1.218 -0.184 N2 A1APH 27
A1APH N4 N4 N 0 1 N N N N N N -40.354 -8.421 -4.080 3.462 3.979 -0.263 N4 A1APH 28
A1APH N5 N5 N 0 1 Y N N N N N -35.117 -12.267 -8.493 9.533 -0.714 0.319 N5 A1APH 29
A1APH N6 N6 N 0 1 Y N N N N N -34.882 -11.022 -8.962 8.575 -1.727 0.450 N6 A1APH 30
A1APH N7 N7 N 0 1 N N N N N N -41.312 -11.983 -0.854 0.077 -2.266 -0.259 N7 A1APH 31
A1APH N8 N8 N 0 1 Y N N N N N -42.177 -11.050 1.121 -1.642 -1.021 0.822 N8 A1APH 32
A1APH O1 O1 O 0 1 N N N N N N -39.410 -8.523 -6.136 5.613 3.442 -0.404 O1 A1APH 33
A1APH O2 O2 O 0 1 Y N N N N N -43.252 -12.752 0.088 -2.226 -2.109 -0.968 O2 A1APH 34
A1APH O3 O3 O 0 1 N N N N N N -47.066 -12.705 3.036 -6.868 -0.615 -0.734 O3 A1APH 35
A1APH O4 O4 O 0 1 N N N N N N -48.872 -14.942 4.310 -9.756 2.340 0.130 O4 A1APH 36
A1APH H1 H1 H 0 1 N N N N N N -37.738 -9.492 -6.742 6.720 2.046 -0.270 H1 A1APH 37
A1APH H2 H2 H 0 1 N N N N N N -38.970 -13.535 -1.486 0.474 0.281 0.064 H2 A1APH 38
A1APH H3 H3 H 0 1 N N N N N N -36.448 -13.167 -7.041 9.329 1.424 -0.049 H3 A1APH 39
A1APH H4 H4 H 0 1 N N N N N N -33.652 -13.041 -9.782 11.299 -0.754 1.449 H4 A1APH 40
A1APH H5 H5 H 0 1 N N N N N N -33.806 -13.880 -8.201 11.258 -1.880 0.071 H5 A1APH 41
A1APH H6 H6 H 0 1 N N N N N N -35.052 -14.123 -9.471 11.478 -0.136 -0.211 H6 A1APH 42
A1APH H7 H7 H 0 1 N N N N N N -45.702 -10.672 4.150 -5.956 0.602 1.394 H7 A1APH 43
A1APH H8 H8 H 0 1 N N N N N N -45.759 -13.598 1.001 -4.937 -1.960 -1.872 H8 A1APH 44
A1APH H9 H9 H 0 1 N N N N N N -47.124 -12.585 5.106 -7.436 1.208 0.054 H9 A1APH 45
A1APH H10 H10 H 0 1 N N N N N N -47.576 -11.085 4.227 -7.844 -0.215 1.043 H10 A1APH 46
A1APH H11 H11 H 0 1 N N N N N N -49.667 -11.755 4.789 -9.107 0.510 -1.640 H11 A1APH 47
A1APH H12 H12 H 0 1 N N N N N N -49.486 -12.716 3.282 -9.515 -0.913 -0.651 H12 A1APH 48
A1APH H13 H13 H 0 1 N N N N N N -48.938 -14.781 6.982 -11.855 -0.235 -0.340 H13 A1APH 49
A1APH H14 H14 H 0 1 N N N N N N -47.624 -13.759 6.306 -12.255 1.415 0.194 H14 A1APH 50
A1APH H15 H15 H 0 1 N N N N N N -49.074 -12.991 7.037 -11.563 1.146 -1.424 H15 A1APH 51
A1APH H16 H16 H 0 1 N N N N N N -41.655 -13.001 -2.740 1.822 -2.349 1.015 H16 A1APH 52
A1APH H17 H17 H 0 1 N N N N N N -41.309 -14.094 -1.358 0.385 -1.504 1.741 H17 A1APH 53
A1APH H18 H18 H 0 1 N N N N N N -39.428 -11.864 0.221 0.192 -1.000 -2.010 H18 A1APH 54
A1APH H19 H19 H 0 1 N N N N N N -39.638 -10.612 -1.050 1.684 -1.985 -1.681 H19 A1APH 55
A1APH H20 H20 H 0 1 N N N N N N -43.478 -9.886 3.401 -3.640 0.516 2.208 H20 A1APH 56
A1APH H21 H21 H 0 1 N N N N N N -51.065 -15.012 5.817 -9.135 0.608 2.058 H21 A1APH 57
A1APH H22 H22 H 0 1 N N N N N N -51.339 -13.237 5.793 -10.837 1.101 2.227 H22 A1APH 58
A1APH H23 H23 H 0 1 N N N N N N -51.360 -14.171 4.258 -10.438 -0.549 1.694 H23 A1APH 59
A1APH H24 H24 H 0 1 N N N N N N -37.817 -13.794 -3.676 3.413 -2.050 0.061 H24 A1APH 60
A1APH H25 H25 H 0 1 N N N N N N -35.831 -9.195 -8.428 6.448 -1.723 0.362 H25 A1APH 61
A1APH H26 H26 H 0 1 N N N N N N -40.753 -7.522 -4.260 2.542 3.684 -0.175 H26 A1APH 62
A1APH H27 H27 H 0 1 N N N N N N -40.500 -8.866 -3.196 3.664 4.925 -0.328 H27 A1APH 63
A1APH H28 H28 H 0 1 N N N N N N -49.028 -15.763 4.762 -9.739 2.704 -0.766 H28 A1APH 64
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
A1APH C10 N5 SING N N 1
A1APH N6 N5 SING Y N 2
A1APH N6 C9 DOUB Y N 3
A1APH N5 C8 SING Y N 4
A1APH C9 C6 SING Y N 5
A1APH C8 C6 DOUB Y N 6
A1APH C6 N3 SING N N 7
A1APH N3 C2 SING N N 8
A1APH O1 C7 DOUB N N 9
A1APH C2 N1 DOUB Y N 10
A1APH C2 C1 SING Y N 11
A1APH N1 C3 SING Y N 12
A1APH C7 C1 SING N N 13
A1APH C7 N4 SING N N 14
A1APH C1 N2 DOUB Y N 15
A1APH C3 C4 DOUB Y N 16
A1APH N2 C4 SING Y N 17
A1APH C4 C5 SING N N 18
A1APH C5 C11 SING N N 19
A1APH C5 C12 SING N N 20
A1APH C11 N7 SING N N 21
A1APH N7 C12 SING N N 22
A1APH N7 C19 SING N N 23
A1APH O2 C19 SING Y N 24
A1APH O2 C16 SING Y N 25
A1APH C19 N8 DOUB Y N 26
A1APH N8 C17 SING Y N 27
A1APH C16 C15 DOUB Y N 28
A1APH C16 C17 SING Y N 29
A1APH C15 C14 SING Y N 30
A1APH C17 C18 DOUB Y N 31
A1APH C14 O3 SING N N 32
A1APH C14 C13 DOUB Y N 33
A1APH C18 C13 SING Y N 34
A1APH O3 C20 SING N N 35
A1APH C20 C21 SING N N 36
A1APH C21 C22 SING N N 37
A1APH O4 C22 SING N N 38
A1APH C22 C23 SING N N 39
A1APH C22 C24 SING N N 40
A1APH N3 H1 SING N N 41
A1APH C5 H2 SING N N 42
A1APH C8 H3 SING N N 43
A1APH C10 H4 SING N N 44
A1APH C10 H5 SING N N 45
A1APH C10 H6 SING N N 46
A1APH C13 H7 SING N N 47
A1APH C15 H8 SING N N 48
A1APH C20 H9 SING N N 49
A1APH C20 H10 SING N N 50
A1APH C21 H11 SING N N 51
A1APH C21 H12 SING N N 52
A1APH C24 H13 SING N N 53
A1APH C24 H14 SING N N 54
A1APH C24 H15 SING N N 55
A1APH C11 H16 SING N N 56
A1APH C11 H17 SING N N 57
A1APH C12 H18 SING N N 58
A1APH C12 H19 SING N N 59
A1APH C18 H20 SING N N 60
A1APH C23 H21 SING N N 61
A1APH C23 H22 SING N N 62
A1APH C23 H23 SING N N 63
A1APH C3 H24 SING N N 64
A1APH C9 H25 SING N N 65
A1APH N4 H26 SING N N 66
A1APH N4 H27 SING N N 67
A1APH O4 H28 SING N N 68
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
A1APH SMILES ACDLabs 12.01 "Cn1cc(cn1)Nc1ncc(nc1C(N)=O)C1CN(C1)c1nc2ccc(cc2o1)OCCC(C)(C)O"
A1APH InChI InChI 1.06 "InChI=1S/C24H28N8O4/c1-24(2,34)6-7-35-16-4-5-17-19(8-16)36-23(30-17)32-11-14(12-32)18-10-26-22(20(29-18)21(25)33)28-15-9-27-31(3)13-15/h4-5,8-10,13-14,34H,6-7,11-12H2,1-3H3,(H2,25,33)(H,26,28)"
A1APH InChIKey InChI 1.06 MALAUNPIQXEERD-UHFFFAOYSA-N
A1APH SMILES_CANONICAL CACTVS 3.385 "Cn1cc(Nc2ncc(nc2C(N)=O)C3CN(C3)c4oc5cc(OCCC(C)(C)O)ccc5n4)cn1"
A1APH SMILES CACTVS 3.385 "Cn1cc(Nc2ncc(nc2C(N)=O)C3CN(C3)c4oc5cc(OCCC(C)(C)O)ccc5n4)cn1"
A1APH SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)(CCOc1ccc2c(c1)oc(n2)N3CC(C3)c4cnc(c(n4)C(=O)N)Nc5cnn(c5)C)O"
A1APH SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)(CCOc1ccc2c(c1)oc(n2)N3CC(C3)c4cnc(c(n4)C(=O)N)Nc5cnn(c5)C)O"
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
A1APH "SYSTEMATIC NAME" ACDLabs 12.01 "6-{1-[6-(3-hydroxy-3-methylbutoxy)-1,3-benzoxazol-2-yl]azetidin-3-yl}-3-[(1-methyl-1H-pyrazol-4-yl)amino]pyrazine-2-carboxamide"
A1APH "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "6-[1-[6-(3-methyl-3-oxidanyl-butoxy)-1,3-benzoxazol-2-yl]azetidin-3-yl]-3-[(1-methylpyrazol-4-yl)amino]pyrazine-2-carboxamide"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
A1APH "Create component" 2024-04-22 RCSB
A1APH "Initial release" 2024-10-09 RCSB
#