data_A1APP # _chem_comp.id A1APP _chem_comp.name Cefadroxil _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H17 N3 O5 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "(1S,2R,3R,6R,7R)-7-{[(2R)-2-amino-2-(4-hydroxyphenyl)acetyl]amino}-3-methyl-8-oxo-5-thia-1-azabicyclo[4.2.0]octane-2-carboxylic acid" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-04-25 _chem_comp.pdbx_modified_date 2024-07-19 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 363.388 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1APP _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9BIR _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1APP C1X C1 C 0 1 N N N N N N 147.315 146.505 155.791 4.814 -0.293 0.312 C1X A1APP 1 A1APP C2X C2 C 0 1 N N N N N N 146.810 146.441 154.375 3.579 0.434 -0.032 C2X A1APP 2 A1APP C3X C3 C 0 1 N N N N N N 146.903 145.384 153.566 3.502 1.741 0.170 C3X A1APP 3 A1APP C4X C4 C 0 1 N N R N N N 145.724 147.802 152.529 1.349 0.342 -1.348 C4X A1APP 4 A1APP C5X C5 C 0 1 N N N N N N 146.427 148.952 154.129 1.943 -1.486 -0.523 C5X A1APP 5 A1APP C6X C6 C 0 1 N N N N N N 146.840 143.964 154.052 4.708 2.379 0.809 C6X A1APP 6 A1APP C7X C7 C 0 1 N N N N N N 147.043 145.514 152.070 2.373 2.663 -0.154 C7X A1APP 7 A1APP C8X C8 C 0 1 N N R N N N 145.727 149.335 152.814 0.620 -0.966 -1.059 C8X A1APP 8 A1APP C9X C9 C 0 1 N N N N N N 145.836 151.013 151.053 -1.454 -1.712 -0.021 C9X A1APP 9 A1APP N1X N1 N 0 1 N N N N N N 146.196 147.611 153.905 2.486 -0.258 -0.580 N1X A1APP 10 A1APP N2X N2 N 0 1 N N N N N N 146.463 150.202 151.912 -0.422 -0.845 -0.037 N2X A1APP 11 A1APP N3X N3 N 0 1 N N N N N N 145.840 152.478 149.122 -3.245 -2.863 1.150 N3X A1APP 12 A1APP O1X O1 O 0 1 N N N N N N 148.398 145.910 156.019 5.803 0.320 0.662 O1X A1APP 13 A1APP O2X O2 O 0 1 N N N N N N 146.634 147.133 156.629 4.845 -1.639 0.244 O2X A1APP 14 A1APP O3X O3 O 0 1 N N N N N N 146.977 149.546 155.040 2.349 -2.577 -0.180 O3X A1APP 15 A1APP O4X O4 O 0 1 N N N N N N 144.614 151.113 150.987 -1.520 -2.591 -0.854 O4X A1APP 16 A1APP O5X O5 O 0 1 N N N N N N 150.740 148.691 147.635 -6.139 2.475 -0.442 O5X A1APP 17 A1APP S1X S1 S 0 1 N N N N N N 146.933 147.177 151.354 0.798 1.777 -0.363 S1X A1APP 18 A1APP C10X C10 C 0 0 N N R N N N 146.742 151.845 150.127 -2.526 -1.588 1.031 C10X A1APP 19 A1APP C11X C11 C 0 0 Y N N N N N 147.810 150.997 149.468 -3.493 -0.501 0.637 C11X A1APP 20 A1APP C12X C12 C 0 0 Y N N N N N 147.556 149.682 149.105 -3.389 0.755 1.206 C12X A1APP 21 A1APP C13X C13 C 0 0 Y N N N N N 149.066 151.523 149.203 -4.479 -0.760 -0.297 C13X A1APP 22 A1APP C14X C14 C 0 0 Y N N N N N 148.527 148.908 148.494 -4.273 1.753 0.846 C14X A1APP 23 A1APP C15X C15 C 0 0 Y N N N N N 150.046 150.762 148.591 -5.366 0.235 -0.660 C15X A1APP 24 A1APP C16X C16 C 0 0 Y N N N N N 149.778 149.449 148.235 -5.267 1.495 -0.086 C16X A1APP 25 A1APP H1X H3 H 0 1 N N N N N N 144.727 147.392 152.311 1.539 0.552 -2.400 H1X A1APP 26 A1APP H4X H4 H 0 1 N N N N N N 146.739 143.955 155.147 5.449 2.605 0.041 H4X A1APP 27 A1APP H3X H5 H 0 1 N N N N N N 145.973 143.460 153.599 4.410 3.301 1.308 H3X A1APP 28 A1APP H2X H6 H 0 1 N N N N N N 147.762 143.437 153.765 5.138 1.694 1.538 H2X A1APP 29 A1APP H5X H7 H 0 1 N N N N N N 146.249 144.906 151.612 2.266 3.389 0.652 H5X A1APP 30 A1APP H6X H8 H 0 1 N N N N N N 148.025 145.102 151.795 2.604 3.194 -1.079 H6X A1APP 31 A1APP H7X H9 H 0 1 N N N N N N 144.706 149.698 153.002 0.278 -1.483 -1.956 H7X A1APP 32 A1APP H8X H10 H 0 1 N N N N N N 147.463 150.193 151.933 -0.369 -0.142 0.629 H8X A1APP 33 A1APP H10X H11 H 0 0 N N N N N N 145.150 153.028 149.592 -3.926 -2.826 1.893 H10X A1APP 34 A1APP H11X H12 H 0 0 N N N N N N 146.377 153.064 148.515 -3.679 -3.117 0.275 H11X A1APP 35 A1APP H3 H14 H 0 1 N N N N N N 147.061 147.095 157.477 5.676 -2.072 0.484 H3 A1APP 36 A1APP H16X H15 H 0 0 N N N N N N 151.531 149.207 147.531 -5.846 3.007 -1.194 H16X A1APP 37 A1APP H9X H16 H 0 1 N N N N N N 147.228 152.631 150.724 -2.069 -1.338 1.988 H9X A1APP 38 A1APP H12X H17 H 0 0 N N N N N N 146.584 149.255 149.303 -2.615 0.956 1.932 H12X A1APP 39 A1APP H13X H18 H 0 0 N N N N N N 149.283 152.544 149.479 -4.556 -1.740 -0.743 H13X A1APP 40 A1APP H14X H19 H 0 0 N N N N N N 148.312 147.886 148.220 -4.192 2.734 1.291 H14X A1APP 41 A1APP H15X H20 H 0 0 N N N N N N 151.017 151.190 148.391 -6.136 0.033 -1.389 H15X A1APP 42 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1APP O5X C16X SING N N 1 A1APP C16X C14X DOUB Y N 2 A1APP C16X C15X SING Y N 3 A1APP C14X C12X SING Y N 4 A1APP C15X C13X DOUB Y N 5 A1APP C12X C11X DOUB Y N 6 A1APP N3X C10X SING N N 7 A1APP C13X C11X SING Y N 8 A1APP C11X C10X SING N N 9 A1APP C10X C9X SING N N 10 A1APP O4X C9X DOUB N N 11 A1APP C9X N2X SING N N 12 A1APP S1X C7X SING N N 13 A1APP S1X C4X SING N N 14 A1APP N2X C8X SING N N 15 A1APP C7X C3X SING N N 16 A1APP C4X C8X SING N N 17 A1APP C4X N1X SING N N 18 A1APP C8X C5X SING N N 19 A1APP C3X C6X SING N N 20 A1APP C3X C2X DOUB N N 21 A1APP N1X C5X SING N N 22 A1APP N1X C2X SING N N 23 A1APP C5X O3X DOUB N N 24 A1APP C2X C1X SING N N 25 A1APP C1X O1X DOUB N N 26 A1APP C1X O2X SING N N 27 A1APP C4X H1X SING N N 28 A1APP C6X H4X SING N N 29 A1APP C6X H3X SING N N 30 A1APP C6X H2X SING N N 31 A1APP C7X H5X SING N N 32 A1APP C7X H6X SING N N 33 A1APP C8X H7X SING N N 34 A1APP N2X H8X SING N N 35 A1APP N3X H10X SING N N 36 A1APP N3X H11X SING N N 37 A1APP O2X H3 SING N N 38 A1APP O5X H16X SING N N 39 A1APP C10X H9X SING N N 40 A1APP C12X H12X SING N N 41 A1APP C13X H13X SING N N 42 A1APP C14X H14X SING N N 43 A1APP C15X H15X SING N N 44 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1APP SMILES ACDLabs 12.01 "CC=1CSC2C(NC(=O)C(N)c3ccc(O)cc3)C(=O)N2C=1C(=O)O" A1APP InChI InChI 1.06 "InChI=1S/C16H17N3O5S/c1-7-6-25-15-11(14(22)19(15)12(7)16(23)24)18-13(21)10(17)8-2-4-9(20)5-3-8/h2-5,10-11,15,20H,6,17H2,1H3,(H,18,21)(H,23,24)/t10-,11-,15-/m1/s1" A1APP InChIKey InChI 1.06 BOEGTKLJZSQCCD-UEKVPHQBSA-N A1APP SMILES_CANONICAL CACTVS 3.385 "CC1=C(N2[C@H](SC1)[C@H](NC(=O)[C@H](N)c3ccc(O)cc3)C2=O)C(O)=O" A1APP SMILES CACTVS 3.385 "CC1=C(N2[CH](SC1)[CH](NC(=O)[CH](N)c3ccc(O)cc3)C2=O)C(O)=O" A1APP SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1=C(N2[C@@H]([C@@H](C2=O)NC(=O)[C@@H](c3ccc(cc3)O)N)SC1)C(=O)O" A1APP SMILES "OpenEye OEToolkits" 2.0.7 "CC1=C(N2C(C(C2=O)NC(=O)C(c3ccc(cc3)O)N)SC1)C(=O)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1APP "SYSTEMATIC NAME" ACDLabs 12.01 "(1S,6R,7R)-7-{[(2R)-2-amino-2-(4-hydroxyphenyl)acetyl]amino}-3-methyl-8-oxo-5-thia-1-azabicyclo[4.2.0]oct-2-ene-2-carboxylic acid" A1APP "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(6~{R},7~{R})-7-[[(2~{R})-2-azanyl-2-(4-hydroxyphenyl)ethanoyl]amino]-3-methyl-8-oxidanylidene-5-thia-1-azabicyclo[4.2.0]oct-2-ene-2-carboxylic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1APP "Create component" 2024-04-25 RCSB A1APP "Initial release" 2024-07-24 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id A1APP _pdbx_chem_comp_synonyms.name "(1S,2R,3R,6R,7R)-7-{[(2R)-2-amino-2-(4-hydroxyphenyl)acetyl]amino}-3-methyl-8-oxo-5-thia-1-azabicyclo[4.2.0]octane-2-carboxylic acid" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type ? #